RNA–Protein interactions for RNA: ENST00000590416.1

LSM14A-208, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-208ENST00000590416 SULT1A2P50226 295 aa12.23□□□□□ -0.45
LSM14A-208ENST00000590416 SUMO1P63165 101 aaKnown RBP12.23□□□□□ -0.45
LSM14A-208ENST00000590416 GOLT1AQ6ZVE7 132 aa12.23□□□□□ -0.45
LSM14A-208ENST00000590416 VGLL1Q99990 258 aa12.23□□□□□ -0.45
LSM14A-208ENST00000590416 AGPAT4-IT1Q9H0P7 198 aa12.23□□□□□ -0.45
LSM14A-208ENST00000590416 C9orf47Q6ZRZ4 202 aa12.22□□□□□ -0.45
LSM14A-208ENST00000590416 C5orf17Q8NAS9 161 aa12.22□□□□□ -0.45
LSM14A-208ENST00000590416 ODF3Q96PU9 254 aa12.22□□□□□ -0.45
LSM14A-208ENST00000590416 A0A1W2PRE2 83 aa12.21□□□□□ -0.45
LSM14A-208ENST00000590416 RBAKDNA6NC62 111 aa12.21□□□□□ -0.45
LSM14A-208ENST00000590416 ZNF705EA8MWA4 302 aaPredicted RBP12.21□□□□□ -0.45
LSM14A-208ENST00000590416 TEX46H3BTG2 121 aa12.21□□□□□ -0.45
LSM14A-208ENST00000590416 DEFB4AO15263 64 aa12.21□□□□□ -0.45
LSM14A-208ENST00000590416 IFNA7P01567 189 aa12.21□□□□□ -0.45
LSM14A-208ENST00000590416 ALKAL2Q6UX46 152 aa12.21□□□□□ -0.45
LSM14A-208ENST00000590416 Q8TAT8 98 aa12.21□□□□□ -0.45
LSM14A-208ENST00000590416 MBD3L1Q8WWY6 194 aa12.21□□□□□ -0.45
LSM14A-208ENST00000590416 YTHDF2Q9Y5A9 579 aaKnown RBP12.21□□□□□ -0.45
LSM14A-208ENST00000590416 TENM3Q9P273 2699 aa12.2□□□□□ -0.46
LSM14A-208ENST00000590416 GGTLC3B5MD39 225 aa12.2□□□□□ -0.46
LSM14A-208ENST00000590416 K7EQM0 130 aa12.2□□□□□ -0.46
LSM14A-208ENST00000590416 CRXO43186 299 aaPredicted RBP12.2□□□□□ -0.46
LSM14A-208ENST00000590416 MIFP14174 115 aa12.2□□□□□ -0.46
LSM14A-208ENST00000590416 ZNF138P52744 262 aa12.2□□□□□ -0.46
LSM14A-208ENST00000590416 CST9LP1Q5W188 147 aa12.2□□□□□ -0.46
LSM14A-208ENST00000590416 ZNF705AQ6ZN79 300 aaPredicted RBP12.2□□□□□ -0.46
LSM14A-208ENST00000590416 C1orf158Q8N1D5 194 aa12.2□□□□□ -0.46
LSM14A-208ENST00000590416 EDA2RQ9HAV5 297 aa12.2□□□□□ -0.46
LSM14A-208ENST00000590416 ZNF492Q9P255 531 aa12.2□□□□□ -0.46
LSM14A-208ENST00000590416 X6R8D5 127 aa12.2□□□□□ -0.46
LSM14A-208ENST00000590416 IGHV4-28A0A0C4DH34 117 aa12.19□□□□□ -0.46
LSM14A-208ENST00000590416 FAM74A7A6NL05 159 aa12.19□□□□□ -0.46
LSM14A-208ENST00000590416 HBE1P02100 147 aa12.19□□□□□ -0.46
LSM14A-208ENST00000590416 KIR3DS1Q14943 382 aa12.19□□□□□ -0.46
LSM14A-208ENST00000590416 ARL6IP6Q8N6S5 226 aa12.19□□□□□ -0.46
LSM14A-208ENST00000590416 LINC01587Q99440 93 aa12.19□□□□□ -0.46
LSM14A-208ENST00000590416 NKX6-2Q9C056 277 aaPredicted RBP12.19□□□□□ -0.46
LSM14A-208ENST00000590416 SERTM2A0A1B0GWG4 89 aa12.18□□□□□ -0.46
LSM14A-208ENST00000590416 TCRAP04437 139 aa12.18□□□□□ -0.46
LSM14A-208ENST00000590416 GPX1P07203 203 aa12.18□□□□□ -0.46
LSM14A-208ENST00000590416 HTN1P15515 57 aa12.18□□□□□ -0.46
LSM14A-208ENST00000590416 PPT1P50897 306 aa12.18□□□□□ -0.46
LSM14A-208ENST00000590416 GFI1BQ5VTD9 330 aa12.18□□□□□ -0.46
LSM14A-208ENST00000590416 SGK494Q96LW2 274 aa12.18□□□□□ -0.46
LSM14A-208ENST00000590416 NIPSNAP3BQ9BS92 247 aa12.18□□□□□ -0.46
LSM14A-208ENST00000590416 C11orf68Q9H3H3 251 aaKnown RBP12.18□□□□□ -0.46
LSM14A-208ENST00000590416 EPDR1Q9UM22 224 aa12.18□□□□□ -0.46
LSM14A-208ENST00000590416 TRAV8-1A0A0A6YYK1 113 aa12.17□□□□□ -0.46
LSM14A-208ENST00000590416 TRAV12-3A0A0B4J271 114 aa12.17□□□□□ -0.46
LSM14A-208ENST00000590416 PAGE4O60829 102 aa12.17□□□□□ -0.46
LSM14A-208ENST00000590416 RNASE4P34096 147 aaKnown RBP12.17□□□□□ -0.46
LSM14A-208ENST00000590416 BTN1A1Q13410 526 aa12.17□□□□□ -0.46
LSM14A-208ENST00000590416 RRN3P1Q2M238 152 aa12.17□□□□□ -0.46
LSM14A-208ENST00000590416 TMEM256Q8N2U0 113 aa12.17□□□□□ -0.46
LSM14A-208ENST00000590416 CYB561D1Q8N8Q1 229 aa12.17□□□□□ -0.46
LSM14A-208ENST00000590416 Q8NAQ8 132 aa12.17□□□□□ -0.46
LSM14A-208ENST00000590416 NEU1Q99519 415 aa12.17□□□□□ -0.46
LSM14A-208ENST00000590416 C7orf71A4D174 169 aa12.16□□□□□ -0.46
LSM14A-208ENST00000590416 SMIM9A6NGZ8 99 aa12.16□□□□□ -0.46
LSM14A-208ENST00000590416 ZNF705GA8MUZ8 300 aaPredicted RBP12.16□□□□□ -0.46
LSM14A-208ENST00000590416 RBMY1A1P0DJD3 496 aaKnown RBP12.16□□□□□ -0.46
LSM14A-208ENST00000590416 RBMY1CP0DJD4 496 aa12.16□□□□□ -0.46
LSM14A-208ENST00000590416 EMP1P54849 157 aa12.16□□□□□ -0.46
LSM14A-208ENST00000590416 RBMY1FQ15415 496 aaKnown RBP12.16□□□□□ -0.46
LSM14A-208ENST00000590416 C20orf144Q9BQM9 153 aa12.16□□□□□ -0.46
LSM14A-208ENST00000590416 ATG101Q9BSB4 218 aa12.16□□□□□ -0.46
LSM14A-208ENST00000590416 NDFIP1Q9BT67 221 aa12.16□□□□□ -0.46
LSM14A-208ENST00000590416 GNG13Q9P2W3 67 aa12.16□□□□□ -0.46
LSM14A-208ENST00000590416 LOC102723971A0A1B0GUV8 181 aa12.15□□□□□ -0.46
LSM14A-208ENST00000590416 F6UZH7 168 aa12.15□□□□□ -0.46
LSM14A-208ENST00000590416 PEX7O00628 323 aa12.15□□□□□ -0.46
LSM14A-208ENST00000590416 CRISP2P16562 243 aa12.15□□□□□ -0.46
LSM14A-208ENST00000590416 ATP5G3P48201 142 aa12.15□□□□□ -0.46
LSM14A-208ENST00000590416 FAM19A4Q96LR4 140 aa12.15□□□□□ -0.46
LSM14A-208ENST00000590416 MANBALQ9NQG1 85 aa12.15□□□□□ -0.46
LSM14A-208ENST00000590416 ARL2-SNX15V9GYD0 113 aa12.15□□□□□ -0.46
LSM14A-208ENST00000590416 KLLNB2CW77 178 aa12.14□□□□□ -0.47
LSM14A-208ENST00000590416 H7BYZ3 331 aa12.14□□□□□ -0.47
LSM14A-208ENST00000590416 BLOC1S1P78537 153 aa12.14□□□□□ -0.47
LSM14A-208ENST00000590416 PRNTQ86SH4 94 aa12.14□□□□□ -0.47
LSM14A-208ENST00000590416 ZFAND2AQ8N6M9 145 aa12.14□□□□□ -0.47
LSM14A-208ENST00000590416 IL17DQ8TAD2 202 aa12.14□□□□□ -0.47
LSM14A-208ENST00000590416 MUC7Q8TAX7 377 aa12.14□□□□□ -0.47
LSM14A-208ENST00000590416 PSG8Q9UQ74 426 aa12.14□□□□□ -0.47
LSM14A-208ENST00000590416 LENEPQ9Y5L5 61 aa12.14□□□□□ -0.47
LSM14A-208ENST00000590416 TRAV1-1A0A0B4J248 108 aa12.13□□□□□ -0.47
LSM14A-208ENST00000590416 TRAV34A0A0B4J273 112 aa12.13□□□□□ -0.47
LSM14A-208ENST00000590416 TRBV7-9A0A0J9YWB2 115 aa12.13□□□□□ -0.47
LSM14A-208ENST00000590416 TMEM189A5PLL7 270 aa12.13□□□□□ -0.47
LSM14A-208ENST00000590416 IFNA1P01562 189 aa12.13□□□□□ -0.47
LSM14A-208ENST00000590416 PRM2P04554 102 aa12.13□□□□□ -0.47
LSM14A-208ENST00000590416 NMBP08949 121 aa12.13□□□□□ -0.47
LSM14A-208ENST00000590416 AKR1C3P42330 323 aa12.13□□□□□ -0.47
LSM14A-208ENST00000590416 TAS2R60P59551 318 aa12.13□□□□□ -0.47
LSM14A-208ENST00000590416 CCL20P78556 96 aa12.13□□□□□ -0.47
LSM14A-208ENST00000590416 FLI1Q01543 452 aaPredicted RBP12.13□□□□□ -0.47
LSM14A-208ENST00000590416 PMS2P11Q13670 270 aa12.13□□□□□ -0.47
LSM14A-208ENST00000590416 PRR9Q5T870 116 aa12.13□□□□□ -0.47
LSM14A-208ENST00000590416 CCDC28AQ8IWP9 274 aa12.13□□□□□ -0.47
LSM14A-208ENST00000590416 TMEM75Q8N9X5 138 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms