RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 KRTAP24-1Q3LI83 254 aa7.69□□□□□ -1.18
VPS25-202ENST00000589219 CLEC19AQ6UXS0 136 aa7.69□□□□□ -1.18
VPS25-202ENST00000589219 IL17RELQ6ZVW7 336 aa7.69□□□□□ -1.18
VPS25-202ENST00000589219 BCL6BQ8N143 479 aaPredicted RBP7.69□□□□□ -1.18
VPS25-202ENST00000589219 SIGLECL1Q8N7X8 197 aa7.69□□□□□ -1.18
VPS25-202ENST00000589219 GTSF1Q8WW33 167 aa7.69□□□□□ -1.18
VPS25-202ENST00000589219 BORCS7Q96B45 105 aa7.69□□□□□ -1.18
VPS25-202ENST00000589219 USMG5Q96IX5 58 aa7.69□□□□□ -1.18
VPS25-202ENST00000589219 NOL4LQ96MY1 436 aaPredicted RBP7.69□□□□□ -1.18
VPS25-202ENST00000589219 HIF1ANQ9NWT6 349 aa7.69□□□□□ -1.18
VPS25-202ENST00000589219 CLEC5AQ9NY25 188 aa7.69□□□□□ -1.18
VPS25-202ENST00000589219 NAGKQ9UJ70 344 aa7.69□□□□□ -1.18
VPS25-202ENST00000589219 ARHGAP32A7KAX9 2087 aa7.69□□□□□ -1.18
VPS25-202ENST00000589219 SH2D7A6NKC9 451 aaPredicted RBP7.68□□□□□ -1.18
VPS25-202ENST00000589219 H3BUX3 64 aa7.68□□□□□ -1.18
VPS25-202ENST00000589219 NUPR1O60356 82 aa7.68□□□□□ -1.18
VPS25-202ENST00000589219 ZNF324O75467 553 aaPredicted RBP7.68□□□□□ -1.18
VPS25-202ENST00000589219 TRGV3P03979 118 aa7.68□□□□□ -1.18
VPS25-202ENST00000589219 RPS20P60866 119 aaKnown RBP7.68□□□□□ -1.18
VPS25-202ENST00000589219 SRSF2Q01130 221 aaKnown RBP7.68□□□□□ -1.18
VPS25-202ENST00000589219 RIGQ13278 110 aa7.68□□□□□ -1.18
VPS25-202ENST00000589219 SCGB2A2Q13296 93 aa7.68□□□□□ -1.18
VPS25-202ENST00000589219 KIAA1644Q3SXP7 199 aa7.68□□□□□ -1.18
VPS25-202ENST00000589219 C9orf152Q5JTZ5 239 aa7.68□□□□□ -1.18
VPS25-202ENST00000589219 FAM209BQ5JX69 171 aa7.68□□□□□ -1.18
VPS25-202ENST00000589219 GDF5OSQ5U4N7 250 aa7.68□□□□□ -1.18
VPS25-202ENST00000589219 C18orf32Q8TCD1 76 aa7.68□□□□□ -1.18
VPS25-202ENST00000589219 PGLYRP4Q96LB8 373 aa7.68□□□□□ -1.18
VPS25-202ENST00000589219 SMAD5-AS1Q9Y6J3 95 aa7.68□□□□□ -1.18
VPS25-202ENST00000589219 U3KQE9 123 aa7.68□□□□□ -1.18
VPS25-202ENST00000589219 SVEP1Q4LDE5 3571 aa7.68□□□□□ -1.18
VPS25-202ENST00000589219 IGKV2-40A0A087WW87 121 aaPredicted RBP7.67□□□□□ -1.18
VPS25-202ENST00000589219 A0A1B0GUT8 65 aa7.67□□□□□ -1.18
VPS25-202ENST00000589219 CLPSL1A2RUU4 121 aa7.67□□□□□ -1.18
VPS25-202ENST00000589219 LINC01548A6NM66 108 aa7.67□□□□□ -1.18
VPS25-202ENST00000589219 ZNF785A8K8V0 405 aa7.67□□□□□ -1.18
VPS25-202ENST00000589219 A8MWP6 167 aa7.67□□□□□ -1.18
VPS25-202ENST00000589219 F2Z2F3 143 aa7.67□□□□□ -1.18
VPS25-202ENST00000589219 NDUFA4O00483 81 aa7.67□□□□□ -1.18
VPS25-202ENST00000589219 TCF21O43680 179 aa7.67□□□□□ -1.18
VPS25-202ENST00000589219 IGKV2D-40P01614 121 aaPredicted RBP7.67□□□□□ -1.18
VPS25-202ENST00000589219 BMI1P35226 326 aa7.67□□□□□ -1.18
VPS25-202ENST00000589219 AMTP48728 403 aa7.67□□□□□ -1.18
VPS25-202ENST00000589219 CAMPP49913 170 aa7.67□□□□□ -1.18
VPS25-202ENST00000589219 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.67□□□□□ -1.18
VPS25-202ENST00000589219 Q6ZWC4 215 aa7.67□□□□□ -1.18
VPS25-202ENST00000589219 ALKBH7Q9BT30 221 aaPredicted RBP7.67□□□□□ -1.18
VPS25-202ENST00000589219 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.66□□□□□ -1.18
VPS25-202ENST00000589219 SH2D1AO60880 128 aa7.66□□□□□ -1.18
VPS25-202ENST00000589219 SCGB1D1O95968 90 aa7.66□□□□□ -1.18
VPS25-202ENST00000589219 APOHP02749 345 aaPredicted RBP7.66□□□□□ -1.18
VPS25-202ENST00000589219 GPX1P07203 203 aa7.66□□□□□ -1.18
VPS25-202ENST00000589219 ARL3P36405 182 aa7.66□□□□□ -1.18
VPS25-202ENST00000589219 LY6EQ16553 131 aa7.66□□□□□ -1.18
VPS25-202ENST00000589219 C9orf139Q6ZV77 190 aa7.66□□□□□ -1.18
VPS25-202ENST00000589219 TEX29Q8N6K0 151 aa7.66□□□□□ -1.18
VPS25-202ENST00000589219 PRR25Q96S07 402 aa7.66□□□□□ -1.18
VPS25-202ENST00000589219 LOC102724200A0A096LPH7 203 aaPredicted RBP7.65□□□□□ -1.18
VPS25-202ENST00000589219 A0A0G2JLM5 398 aa7.65□□□□□ -1.18
VPS25-202ENST00000589219 KIR2DL5BA0A0G2JN68 375 aa7.65□□□□□ -1.18
VPS25-202ENST00000589219 KIR2DL5BA0A0G2JPC4 375 aa7.65□□□□□ -1.18
VPS25-202ENST00000589219 A0A1W2PS18 150 aa7.65□□□□□ -1.18
VPS25-202ENST00000589219 TMEM189A5PLL7 270 aa7.65□□□□□ -1.18
VPS25-202ENST00000589219 HSBP1O75506 76 aa7.65□□□□□ -1.18
VPS25-202ENST00000589219 RAB4AP20338 218 aa7.65□□□□□ -1.18
VPS25-202ENST00000589219 PMCHP20382 165 aa7.65□□□□□ -1.18
VPS25-202ENST00000589219 DDTP30046 118 aa7.65□□□□□ -1.18
VPS25-202ENST00000589219 PPIFP30405 207 aaKnown RBP7.65□□□□□ -1.18
VPS25-202ENST00000589219 DEFA6Q01524 100 aa7.65□□□□□ -1.18
VPS25-202ENST00000589219 LCN12Q6JVE5 192 aa7.65□□□□□ -1.18
VPS25-202ENST00000589219 KIR2DL5AQ8N109 375 aa7.65□□□□□ -1.18
VPS25-202ENST00000589219 CHCHD1Q96BP2 118 aaKnown RBP7.65□□□□□ -1.18
VPS25-202ENST00000589219 C8orf49Q96NF6 230 aa7.65□□□□□ -1.18
VPS25-202ENST00000589219 RCHY1Q96PM5 261 aa7.65□□□□□ -1.18
VPS25-202ENST00000589219 SSBP4Q9BWG4 385 aaPredicted RBP7.65□□□□□ -1.18
VPS25-202ENST00000589219 IGHV3-35A0A0C4DH35 117 aa7.64□□□□□ -1.19
VPS25-202ENST00000589219 TMEM89A2RUT3 159 aa7.64□□□□□ -1.19
VPS25-202ENST00000589219 ZNF705FA8MVS1 300 aaPredicted RBP7.64□□□□□ -1.19
VPS25-202ENST00000589219 IGLV1-40P01703 118 aa7.64□□□□□ -1.19
VPS25-202ENST00000589219 IGHG4P01861 327 aa7.64□□□□□ -1.19
VPS25-202ENST00000589219 ZNF705DP0CH99 300 aaPredicted RBP7.64□□□□□ -1.19
VPS25-202ENST00000589219 ZNF705BP0CI00 300 aaPredicted RBP7.64□□□□□ -1.19
VPS25-202ENST00000589219 CTRLP40313 264 aa7.64□□□□□ -1.19
VPS25-202ENST00000589219 CRIP1P50238 77 aa7.64□□□□□ -1.19
VPS25-202ENST00000589219 CFHR3Q02985 330 aa7.64□□□□□ -1.19
VPS25-202ENST00000589219 TEX43Q6ZNM6 134 aa7.64□□□□□ -1.19
VPS25-202ENST00000589219 C8orf86Q6ZUL3 223 aa7.64□□□□□ -1.19
VPS25-202ENST00000589219 GLMPQ8WWB7 406 aa7.64□□□□□ -1.19
VPS25-202ENST00000589219 NRN1Q9NPD7 142 aa7.64□□□□□ -1.19
VPS25-202ENST00000589219 IGHV3OR16-8A0A075B7F1 116 aa7.63□□□□□ -1.19
VPS25-202ENST00000589219 ARMS2P0C7Q2 107 aa7.63□□□□□ -1.19
VPS25-202ENST00000589219 RNASEKQ6P5S7 137 aaKnown RBP7.63□□□□□ -1.19
VPS25-202ENST00000589219 ZNF493Q6ZR52 646 aa7.63□□□□□ -1.19
VPS25-202ENST00000589219 REC114Q7Z4M0 266 aa7.63□□□□□ -1.19
VPS25-202ENST00000589219 ZNF664Q8N3J9 261 aa7.63□□□□□ -1.19
VPS25-202ENST00000589219 PRO1933Q9H354 126 aa7.63□□□□□ -1.19
VPS25-202ENST00000589219 PPP1R14DQ9NXH3 145 aa7.63□□□□□ -1.19
VPS25-202ENST00000589219 TRAV8-2A0A0B4J237 113 aa7.62□□□□□ -1.19
VPS25-202ENST00000589219 FSHBP01225 129 aa7.62□□□□□ -1.19
VPS25-202ENST00000589219 PF4V1P10720 104 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms