RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 ST20Q9HBF5 79 aa13.59□□□□□ -0.23
ERCC2-211ENST00000588652 IGKV2-40A0A087WW87 121 aaPredicted RBP13.58□□□□□ -0.24
ERCC2-211ENST00000588652 IGKV2D-40P01614 121 aaPredicted RBP13.58□□□□□ -0.24
ERCC2-211ENST00000588652 MEGF9Q9H1U4 602 aa13.58□□□□□ -0.24
ERCC2-211ENST00000588652 ZFAND3Q9H8U3 227 aa13.58□□□□□ -0.24
ERCC2-211ENST00000588652 SMAD5-AS1Q9Y6J3 95 aa13.58□□□□□ -0.24
ERCC2-211ENST00000588652 MYO18BQ8IUG5 2567 aa13.58□□□□□ -0.24
ERCC2-211ENST00000588652 MAP1AP78559 2803 aaPredicted RBP13.58□□□□□ -0.24
ERCC2-211ENST00000588652 hDV102S1A0JD36 115 aa13.58□□□□□ -0.24
ERCC2-211ENST00000588652 SH2D1AO60880 128 aa13.58□□□□□ -0.24
ERCC2-211ENST00000588652 IGHV4-38-2P0DP08 117 aa13.58□□□□□ -0.24
ERCC2-211ENST00000588652 RELQ04864 619 aaPredicted RBP13.58□□□□□ -0.24
ERCC2-211ENST00000588652 PET117Q6UWS5 81 aa13.58□□□□□ -0.24
ERCC2-211ENST00000588652 ZNF493Q6ZR52 646 aa13.58□□□□□ -0.24
ERCC2-211ENST00000588652 PRSS3P2Q8NHM4 247 aa13.58□□□□□ -0.24
ERCC2-211ENST00000588652 USP24Q9UPU5 2620 aa13.57□□□□□ -0.24
ERCC2-211ENST00000588652 HSBP1L1C9JCN9 74 aa13.57□□□□□ -0.24
ERCC2-211ENST00000588652 FA2HQ7L5A8 372 aa13.57□□□□□ -0.24
ERCC2-211ENST00000588652 AP5S1Q9NUS5 200 aa13.57□□□□□ -0.24
ERCC2-211ENST00000588652 PPP1R14DQ9NXH3 145 aa13.57□□□□□ -0.24
ERCC2-211ENST00000588652 TP73-AS1Q9UF72 201 aa13.57□□□□□ -0.24
ERCC2-211ENST00000588652 UTP20O75691 2785 aaKnown RBP13.57□□□□□ -0.24
ERCC2-211ENST00000588652 TMSB15BA0A087X1C1 80 aa13.56□□□□□ -0.24
ERCC2-211ENST00000588652 LYZL1Q6UWQ5 148 aa13.56□□□□□ -0.24
ERCC2-211ENST00000588652 CLEC19AQ6UXS0 136 aa13.56□□□□□ -0.24
ERCC2-211ENST00000588652 COX8CQ7Z4L0 72 aa13.56□□□□□ -0.24
ERCC2-211ENST00000588652 TIMM8BQ9Y5J9 83 aaPredicted RBP13.56□□□□□ -0.24
ERCC2-211ENST00000588652 EEF1AKMT3Q96AZ1 226 aa13.55□□□□□ -0.24
ERCC2-211ENST00000588652 PRR25Q96S07 402 aa13.55□□□□□ -0.24
ERCC2-211ENST00000588652 TMEM213A2RRL7 107 aa13.55□□□□□ -0.24
ERCC2-211ENST00000588652 MSMBP08118 114 aa13.55□□□□□ -0.24
ERCC2-211ENST00000588652 BMI1P35226 326 aa13.55□□□□□ -0.24
ERCC2-211ENST00000588652 RPS20P60866 119 aaKnown RBP13.55□□□□□ -0.24
ERCC2-211ENST00000588652 C19orf54Q5BKX5 351 aa13.55□□□□□ -0.24
ERCC2-211ENST00000588652 MCRIP2Q9BUT9 160 aaKnown RBP13.55□□□□□ -0.24
ERCC2-211ENST00000588652 TRBV7-1A0A0A6YYK4 115 aa13.54□□□□□ -0.24
ERCC2-211ENST00000588652 TRAV41A0A0B4J266 112 aa13.54□□□□□ -0.24
ERCC2-211ENST00000588652 BUB3O43684 328 aa13.54□□□□□ -0.24
ERCC2-211ENST00000588652 IGHG4P01861 327 aa13.54□□□□□ -0.24
ERCC2-211ENST00000588652 PRB1P04280 392 aa13.54□□□□□ -0.24
ERCC2-211ENST00000588652 CRIP2P52943 208 aaPredicted RBP13.54□□□□□ -0.24
ERCC2-211ENST00000588652 LINC00527Q9UJ94 153 aa13.54□□□□□ -0.24
ERCC2-211ENST00000588652 CLPSL1A2RUU4 121 aa13.53□□□□□ -0.24
ERCC2-211ENST00000588652 H0Y8G0 127 aa13.53□□□□□ -0.24
ERCC2-211ENST00000588652 LINC01545Q5VT33 79 aa13.53□□□□□ -0.24
ERCC2-211ENST00000588652 OR10AG1Q8NH19 301 aa13.53□□□□□ -0.24
ERCC2-211ENST00000588652 Q8TAT8 98 aa13.53□□□□□ -0.24
ERCC2-211ENST00000588652 NRGNQ92686 78 aa13.53□□□□□ -0.24
ERCC2-211ENST00000588652 U3KQK5 164 aa13.53□□□□□ -0.24
ERCC2-211ENST00000588652 ZFYVE26Q68DK2 2539 aa13.53□□□□□ -0.24
ERCC2-211ENST00000588652 D6R8Y8 96 aa13.53□□□□□ -0.24
ERCC2-211ENST00000588652 HLA-DMBP28068 263 aa13.53□□□□□ -0.24
ERCC2-211ENST00000588652 RAB9AP51151 201 aa13.53□□□□□ -0.24
ERCC2-211ENST00000588652 IGFL4Q6B9Z1 124 aa13.53□□□□□ -0.24
ERCC2-211ENST00000588652 VGLL1Q99990 258 aa13.53□□□□□ -0.24
ERCC2-211ENST00000588652 ZNF747Q9BV97 191 aa13.53□□□□□ -0.24
ERCC2-211ENST00000588652 FAM104BQ5XKR9 115 aa13.52□□□□□ -0.24
ERCC2-211ENST00000588652 IFI27P40305 119 aaPredicted RBP13.52□□□□□ -0.25
ERCC2-211ENST00000588652 ZNF80P51504 273 aaPredicted RBP13.52□□□□□ -0.25
ERCC2-211ENST00000588652 ATP5G2Q06055 141 aa13.52□□□□□ -0.25
ERCC2-211ENST00000588652 FAM106AQ4KMX7 169 aa13.52□□□□□ -0.25
ERCC2-211ENST00000588652 AMN1Q8IY45 258 aa13.52□□□□□ -0.25
ERCC2-211ENST00000588652 ORAOV1Q8WV07 137 aa13.52□□□□□ -0.25
ERCC2-211ENST00000588652 SCRT2Q9NQ03 307 aa13.52□□□□□ -0.25
ERCC2-211ENST00000588652 CSMD2Q7Z408 3487 aa13.51□□□□□ -0.25
ERCC2-211ENST00000588652 LY6EQ16553 131 aa13.51□□□□□ -0.25
ERCC2-211ENST00000588652 Q6ZVH6 145 aa13.51□□□□□ -0.25
ERCC2-211ENST00000588652 ORMDL3Q8N138 153 aa13.51□□□□□ -0.25
ERCC2-211ENST00000588652 PRELID3AQ96N28 172 aa13.51□□□□□ -0.25
ERCC2-211ENST00000588652 PMCHL2Q9BQD1 86 aa13.51□□□□□ -0.25
ERCC2-211ENST00000588652 A0A087X0K7 114 aa13.51□□□□□ -0.25
ERCC2-211ENST00000588652 H3BUX3 64 aa13.51□□□□□ -0.25
ERCC2-211ENST00000588652 FER1L6-AS1Q8NA97 138 aa13.51□□□□□ -0.25
ERCC2-211ENST00000588652 HIF1ANQ9NWT6 349 aa13.51□□□□□ -0.25
ERCC2-211ENST00000588652 SIGLEC8Q9NYZ4 499 aa13.51□□□□□ -0.25
ERCC2-211ENST00000588652 A0A096LNJ9 63 aa13.5□□□□□ -0.25
ERCC2-211ENST00000588652 MUC21A0A0G2JKD1 596 aa13.5□□□□□ -0.25
ERCC2-211ENST00000588652 MUC21A0A140T8X8 626 aa13.5□□□□□ -0.25
ERCC2-211ENST00000588652 FAM223BA6NKX1 122 aa13.5□□□□□ -0.25
ERCC2-211ENST00000588652 B4DSR2 109 aa13.5□□□□□ -0.25
ERCC2-211ENST00000588652 LOXL1Q08397 574 aaPredicted RBP13.5□□□□□ -0.25
ERCC2-211ENST00000588652 MUC21Q5SSG8 566 aa13.5□□□□□ -0.25
ERCC2-211ENST00000588652 SLC25A34Q6PIV7 304 aa13.5□□□□□ -0.25
ERCC2-211ENST00000588652 FAM223AQ8IWN6 122 aa13.5□□□□□ -0.25
ERCC2-211ENST00000588652 BBC3Q96PG8 261 aaPredicted RBP13.5□□□□□ -0.25
ERCC2-211ENST00000588652 MS4A6AQ9H2W1 248 aa13.5□□□□□ -0.25
ERCC2-211ENST00000588652 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.5□□□□□ -0.252e-6■■■■□ 21
ERCC2-211ENST00000588652 LOC389332A0A1B0GUA5 103 aa13.5□□□□□ -0.25
ERCC2-211ENST00000588652 IGF1P05019 195 aa13.5□□□□□ -0.25
ERCC2-211ENST00000588652 ATP6V0BQ99437 205 aa13.5□□□□□ -0.25
ERCC2-211ENST00000588652 COX11Q9Y6N1 276 aa13.5□□□□□ -0.25
ERCC2-211ENST00000588652 ZNF462Q96JM2 2506 aa13.49□□□□□ -0.25
ERCC2-211ENST00000588652 IGHV3-66A0A0C4DH42 116 aa13.49□□□□□ -0.25
ERCC2-211ENST00000588652 A6NDX4 124 aa13.49□□□□□ -0.25
ERCC2-211ENST00000588652 NCR2O95944 276 aa13.49□□□□□ -0.25
ERCC2-211ENST00000588652 AVPP01185 164 aa13.49□□□□□ -0.25
ERCC2-211ENST00000588652 TWIST1Q15672 202 aa13.49□□□□□ -0.25
ERCC2-211ENST00000588652 MRPL51Q4U2R6 128 aaKnown RBP13.49□□□□□ -0.25
ERCC2-211ENST00000588652 ZNF575Q86XF7 245 aa13.49□□□□□ -0.25
ERCC2-211ENST00000588652 TRGV3P03979 118 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms