RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 CRIP1P50238 77 aa12.52□□□□□ -0.4
NFIX-210ENST00000588228 ERCC8Q13216 396 aa12.52□□□□□ -0.4
NFIX-210ENST00000588228 LINC01006Q8NI28 216 aa12.52□□□□□ -0.4
NFIX-210ENST00000588228 C20orf173Q96LM9 149 aa12.52□□□□□ -0.4
NFIX-210ENST00000588228 NEU1Q99519 415 aa12.52□□□□□ -0.4
NFIX-210ENST00000588228 GFRA4Q9GZZ7 299 aa12.52□□□□□ -0.4
NFIX-210ENST00000588228 SONP18583 2426 aaKnown RBP12.51□□□□□ -0.41
NFIX-210ENST00000588228 FAM231BA6NCW3 169 aa12.51□□□□□ -0.41
NFIX-210ENST00000588228 TRGC1P0CF51 173 aa12.51□□□□□ -0.41
NFIX-210ENST00000588228 DEFB136Q30KP8 78 aa12.51□□□□□ -0.41
NFIX-210ENST00000588228 COX19Q49B96 90 aa12.51□□□□□ -0.41
NFIX-210ENST00000588228 C9orf47Q6ZRZ4 202 aa12.51□□□□□ -0.41
NFIX-210ENST00000588228 ZNF738Q8NE65 137 aa12.51□□□□□ -0.41
NFIX-210ENST00000588228 KLHL30-AS1Q8NEE0 82 aa12.51□□□□□ -0.41
NFIX-210ENST00000588228 NUP35Q8NFH5 326 aa12.51□□□□□ -0.41
NFIX-210ENST00000588228 OR11H1Q8NG94 326 aa12.51□□□□□ -0.41
NFIX-210ENST00000588228 DPF1Q92782 380 aa12.51□□□□□ -0.41
NFIX-210ENST00000588228 TRAPPC1Q9Y5R8 145 aa12.51□□□□□ -0.41
NFIX-210ENST00000588228 C5orf52A6NGY3 159 aa12.51□□□□□ -0.41
NFIX-210ENST00000588228 C2orf70A6NJV1 201 aa12.51□□□□□ -0.41
NFIX-210ENST00000588228 HIGD1CA8MV81 97 aa12.51□□□□□ -0.41
NFIX-210ENST00000588228 NDUFA7O95182 113 aa12.51□□□□□ -0.41
NFIX-210ENST00000588228 CBLN1P23435 193 aa12.51□□□□□ -0.41
NFIX-210ENST00000588228 SLURP1P55000 103 aa12.51□□□□□ -0.41
NFIX-210ENST00000588228 SMUG1Q53HV7 270 aa12.51□□□□□ -0.41
NFIX-210ENST00000588228 FAM162BQ5T6X4 162 aa12.51□□□□□ -0.41
NFIX-210ENST00000588228 TMEM78Q5T7P6 136 aa12.51□□□□□ -0.41
NFIX-210ENST00000588228 OR2D3Q8NGH3 330 aa12.51□□□□□ -0.41
NFIX-210ENST00000588228 OR1N2Q8NGR9 330 aa12.51□□□□□ -0.41
NFIX-210ENST00000588228 AGPAT4-IT1Q9H0P7 198 aa12.51□□□□□ -0.41
NFIX-210ENST00000588228 PPP1R14DQ9NXH3 145 aa12.51□□□□□ -0.41
NFIX-210ENST00000588228 IGKV3-7A0A075B6H7 116 aa12.5□□□□□ -0.41
NFIX-210ENST00000588228 OVOL1O14753 267 aa12.5□□□□□ -0.41
NFIX-210ENST00000588228 ZNF138P52744 262 aa12.5□□□□□ -0.41
NFIX-210ENST00000588228 SNRPEP62304 92 aaKnown RBP12.5□□□□□ -0.41
NFIX-210ENST00000588228 FABP9Q0Z7S8 132 aa12.5□□□□□ -0.41
NFIX-210ENST00000588228 WDR73Q6P4I2 378 aa12.5□□□□□ -0.41
NFIX-210ENST00000588228 GNB1LQ9BYB4 327 aa12.5□□□□□ -0.41
NFIX-210ENST00000588228 GPR61Q9BZJ8 451 aa12.5□□□□□ -0.41
NFIX-210ENST00000588228 SAV1Q9H4B6 383 aaPredicted RBP12.5□□□□□ -0.41
NFIX-210ENST00000588228 ACANP16112 2415 aa12.49□□□□□ -0.41
NFIX-210ENST00000588228 M0QZ24 198 aa12.49□□□□□ -0.41
NFIX-210ENST00000588228 SPINK4O60575 86 aa12.49□□□□□ -0.41
NFIX-210ENST00000588228 ID1P41134 155 aa12.49□□□□□ -0.41
NFIX-210ENST00000588228 RASL11AQ6T310 242 aa12.49□□□□□ -0.41
NFIX-210ENST00000588228 DCANP1Q8TF63 244 aa12.49□□□□□ -0.41
NFIX-210ENST00000588228 MYO9AB2RTY4 2548 aa12.49□□□□□ -0.41
NFIX-210ENST00000588228 SH2D1AO60880 128 aa12.48□□□□□ -0.41
NFIX-210ENST00000588228 MT-ND6P03923 174 aa12.48□□□□□ -0.41
NFIX-210ENST00000588228 MRPL54Q6P161 138 aaKnown RBP12.48□□□□□ -0.41
NFIX-210ENST00000588228 ATP5L2Q7Z4Y8 100 aa12.48□□□□□ -0.41
NFIX-210ENST00000588228 GTSF1Q8WW33 167 aa12.48□□□□□ -0.41
NFIX-210ENST00000588228 PEMTQ9UBM1 199 aa12.48□□□□□ -0.41
NFIX-210ENST00000588228 OTOGQ6ZRI0 2925 aa12.48□□□□□ -0.41
NFIX-210ENST00000588228 SNURFLB1AK76 121 aa12.48□□□□□ -0.41
NFIX-210ENST00000588228 INAFM1C9JVW0 142 aa12.48□□□□□ -0.41
NFIX-210ENST00000588228 OR10J6PQ8NGY7 276 aa12.48□□□□□ -0.41
NFIX-210ENST00000588228 MS4A6AQ9H2W1 248 aa12.48□□□□□ -0.41
NFIX-210ENST00000588228 LENEPQ9Y5L5 61 aa12.48□□□□□ -0.41
NFIX-210ENST00000588228 UBE2CO00762 179 aa12.47□□□□□ -0.41
NFIX-210ENST00000588228 FRMD6-AS1P0C7T7 363 aa12.47□□□□□ -0.41
NFIX-210ENST00000588228 CD28P10747 220 aa12.47□□□□□ -0.41
NFIX-210ENST00000588228 ZNF80P51504 273 aaPredicted RBP12.47□□□□□ -0.41
NFIX-210ENST00000588228 FOXA3P55318 350 aaPredicted RBP12.47□□□□□ -0.41
NFIX-210ENST00000588228 NDUFA6P56556 154 aa12.47□□□□□ -0.41
NFIX-210ENST00000588228 RBPMS2Q6ZRY4 209 aaKnown RBP12.47□□□□□ -0.41
NFIX-210ENST00000588228 LINC00477Q96M19 166 aa12.47□□□□□ -0.41
NFIX-210ENST00000588228 SELENOKQ9Y6D0 94 aa12.47□□□□□ -0.41
NFIX-210ENST00000588228 BAHCC1Q9P281 2608 aa12.47□□□□□ -0.41
NFIX-210ENST00000588228 TMEM136Q6ZRR5 245 aa12.46□□□□□ -0.41
NFIX-210ENST00000588228 OR9G4Q8NGQ1 327 aa12.46□□□□□ -0.41
NFIX-210ENST00000588228 MRPL18Q9H0U6 180 aaKnown RBP12.46□□□□□ -0.41
NFIX-210ENST00000588228 TSSC4Q9Y5U2 329 aaPredicted RBP12.46□□□□□ -0.41
NFIX-210ENST00000588228 XKRY2A2RUG3 117 aa12.45□□□□□ -0.42
NFIX-210ENST00000588228 TMEM189A5PLL7 270 aa12.45□□□□□ -0.42
NFIX-210ENST00000588228 FABP5P3A8MUU1 101 aa12.45□□□□□ -0.42
NFIX-210ENST00000588228 HLA-DQA1P01909 254 aa12.45□□□□□ -0.42
NFIX-210ENST00000588228 SRSF2Q01130 221 aaKnown RBP12.45□□□□□ -0.42
NFIX-210ENST00000588228 ADAMTSL5Q6ZMM2 481 aa12.45□□□□□ -0.42
NFIX-210ENST00000588228 DUX3Q96PT4 197 aa12.45□□□□□ -0.42
NFIX-210ENST00000588228 A0A1B0GXF2 115 aa12.45□□□□□ -0.42
NFIX-210ENST00000588228 TCF21O43680 179 aa12.45□□□□□ -0.42
NFIX-210ENST00000588228 GZMBP10144 247 aa12.45□□□□□ -0.42
NFIX-210ENST00000588228 RPS20P60866 119 aaKnown RBP12.45□□□□□ -0.42
NFIX-210ENST00000588228 Q6AWC8 147 aa12.45□□□□□ -0.42
NFIX-210ENST00000588228 WFDC3Q8IUB2 231 aa12.45□□□□□ -0.42
NFIX-210ENST00000588228 C11orf44Q8N8P7 122 aa12.45□□□□□ -0.42
NFIX-210ENST00000588228 OR8A1Q8NGG7 326 aa12.45□□□□□ -0.42
NFIX-210ENST00000588228 DLX4Q92988 240 aaPredicted RBP12.45□□□□□ -0.42
NFIX-210ENST00000588228 PGLYRP4Q96LB8 373 aa12.45□□□□□ -0.42
NFIX-210ENST00000588228 CITED2Q99967 270 aaPredicted RBP12.45□□□□□ -0.42
NFIX-210ENST00000588228 RNF114Q9Y508 228 aa12.45□□□□□ -0.42
NFIX-210ENST00000588228 HIVEP2P31629 2446 aa12.44□□□□□ -0.42
NFIX-210ENST00000588228 K7EQG2 157 aa12.44□□□□□ -0.42
NFIX-210ENST00000588228 HAX1O00165 279 aa12.44□□□□□ -0.42
NFIX-210ENST00000588228 ZNF705DP0CH99 300 aaPredicted RBP12.44□□□□□ -0.42
NFIX-210ENST00000588228 ZNF705BP0CI00 300 aaPredicted RBP12.44□□□□□ -0.42
NFIX-210ENST00000588228 HOXA5P20719 270 aa12.44□□□□□ -0.42
NFIX-210ENST00000588228 FHL3Q13643 280 aa12.44□□□□□ -0.42
NFIX-210ENST00000588228 RAX2Q96IS3 184 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms