RNA–Protein interactions for RNA: ENST00000586975.1

CLPTM1-206, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-206ENST00000586975 GAGE12GP0CL81 117 aa13.38□□□□□ -0.27
CLPTM1-206ENST00000586975 GAGE12IP0CL82 117 aa13.38□□□□□ -0.27
CLPTM1-206ENST00000586975 RNASE4P34096 147 aaKnown RBP13.38□□□□□ -0.27
CLPTM1-206ENST00000586975 OR5I1Q13606 314 aa13.38□□□□□ -0.27
CLPTM1-206ENST00000586975 LGALS9BQ3B8N2 356 aa13.38□□□□□ -0.27
CLPTM1-206ENST00000586975 SCGB1C1Q8TD33 95 aa13.38□□□□□ -0.27
CLPTM1-206ENST00000586975 LINC00477Q96M19 166 aa13.38□□□□□ -0.27
CLPTM1-206ENST00000586975 MRPL32Q9BYC8 188 aaKnown RBP13.38□□□□□ -0.27
CLPTM1-206ENST00000586975 FUT9Q9Y231 359 aa13.38□□□□□ -0.27
CLPTM1-206ENST00000586975 HSPB11Q9Y547 144 aa13.38□□□□□ -0.27
CLPTM1-206ENST00000586975 FAT2Q9NYQ8 4349 aa13.37□□□□□ -0.27
CLPTM1-206ENST00000586975 C7orf71A4D174 169 aa13.37□□□□□ -0.27
CLPTM1-206ENST00000586975 OR7C2O60412 319 aa13.37□□□□□ -0.27
CLPTM1-206ENST00000586975 IFNA5P01569 189 aa13.37□□□□□ -0.27
CLPTM1-206ENST00000586975 RPL12P30050 165 aaKnown RBP13.37□□□□□ -0.27
CLPTM1-206ENST00000586975 BTN1A1Q13410 526 aa13.37□□□□□ -0.27
CLPTM1-206ENST00000586975 FFAR4Q5NUL3 377 aa13.37□□□□□ -0.27
CLPTM1-206ENST00000586975 TMEM78Q5T7P6 136 aa13.37□□□□□ -0.27
CLPTM1-206ENST00000586975 RNF141Q8WVD5 230 aa13.37□□□□□ -0.27
CLPTM1-206ENST00000586975 PYGO2Q9BRQ0 406 aa13.37□□□□□ -0.27
CLPTM1-206ENST00000586975 BATF3Q9NR55 127 aa13.37□□□□□ -0.27
CLPTM1-206ENST00000586975 MBD2Q9UBB5 411 aa13.37□□□□□ -0.27
CLPTM1-206ENST00000586975 PRSS29PA6NIE9 313 aa13.36□□□□□ -0.27
CLPTM1-206ENST00000586975 GPX1P07203 203 aa13.36□□□□□ -0.27
CLPTM1-206ENST00000586975 CD300CQ08708 224 aa13.36□□□□□ -0.27
CLPTM1-206ENST00000586975 FXYD5Q96DB9 178 aa13.36□□□□□ -0.27
CLPTM1-206ENST00000586975 RTL8CO15255 209 aa13.35□□□□□ -0.27
CLPTM1-206ENST00000586975 RANP62826 216 aaKnown RBP13.35□□□□□ -0.27
CLPTM1-206ENST00000586975 PHYHIPLQ96FC7 376 aa13.35□□□□□ -0.27
CLPTM1-206ENST00000586975 VGLL1Q99990 258 aa13.35□□□□□ -0.27
CLPTM1-206ENST00000586975 DNAH17Q9UFH2 4485 aa13.35□□□□□ -0.27
CLPTM1-206ENST00000586975 A0A0J9YY99 117 aa13.34□□□□□ -0.27
CLPTM1-206ENST00000586975 EIF3GO75821 320 aaKnown RBP eCLIP13.34□□□□□ -0.27
CLPTM1-206ENST00000586975 C9orf47Q6ZRZ4 202 aa13.34□□□□□ -0.27
CLPTM1-206ENST00000586975 GSN-AS1Q9NRJ2 163 aa13.34□□□□□ -0.27
CLPTM1-206ENST00000586975 TRAV26-1A0A087WT03 109 aa13.33□□□□□ -0.28
CLPTM1-206ENST00000586975 KLLNB2CW77 178 aa13.33□□□□□ -0.28
CLPTM1-206ENST00000586975 CSN1S1P47710 185 aa13.33□□□□□ -0.28
CLPTM1-206ENST00000586975 CCL18P55774 89 aa13.33□□□□□ -0.28
CLPTM1-206ENST00000586975 UBE2L3P68036 154 aaKnown RBP13.33□□□□□ -0.28
CLPTM1-206ENST00000586975 Q6ZR54 194 aa13.33□□□□□ -0.28
CLPTM1-206ENST00000586975 GNPNAT1Q96EK6 184 aaPredicted RBP13.33□□□□□ -0.28
CLPTM1-206ENST00000586975 FAM19A4Q96LR4 140 aa13.33□□□□□ -0.28
CLPTM1-206ENST00000586975 ALG5Q9Y673 324 aa13.33□□□□□ -0.28
CLPTM1-206ENST00000586975 ZNF324O75467 553 aaPredicted RBP13.32□□□□□ -0.28
CLPTM1-206ENST00000586975 Q6ZTI0 123 aa13.32□□□□□ -0.28
CLPTM1-206ENST00000586975 EIF4E3Q8N5X7 224 aaKnown RBP13.32□□□□□ -0.28
CLPTM1-206ENST00000586975 LINC00612Q8N6U2 182 aa13.32□□□□□ -0.28
CLPTM1-206ENST00000586975 ZNF680Q8NEM1 530 aa13.32□□□□□ -0.28
CLPTM1-206ENST00000586975 Q8TAT8 98 aa13.32□□□□□ -0.28
CLPTM1-206ENST00000586975 WFDC1Q9HC57 220 aa13.32□□□□□ -0.28
CLPTM1-206ENST00000586975 HOXA5P20719 270 aa13.31□□□□□ -0.28
CLPTM1-206ENST00000586975 ZNF138P52744 262 aa13.31□□□□□ -0.28
CLPTM1-206ENST00000586975 FAM3BP58499 235 aaPredicted RBP13.31□□□□□ -0.28
CLPTM1-206ENST00000586975 TAS2R45P59539 299 aa13.31□□□□□ -0.28
CLPTM1-206ENST00000586975 SOHLH1Q5JUK2 328 aa13.31□□□□□ -0.28
CLPTM1-206ENST00000586975 PRR9Q5T870 116 aa13.31□□□□□ -0.28
CLPTM1-206ENST00000586975 ZNF503Q96F45 646 aa13.31□□□□□ -0.28
CLPTM1-206ENST00000586975 Q9H3A6 140 aa13.31□□□□□ -0.28
CLPTM1-206ENST00000586975 TMPRSS5Q9H3S3 457 aa13.31□□□□□ -0.28
CLPTM1-206ENST00000586975 ZNF492Q9P255 531 aa13.31□□□□□ -0.28
CLPTM1-206ENST00000586975 TRGV2A0A075B6R0 118 aa13.3□□□□□ -0.28
CLPTM1-206ENST00000586975 TRGV1A0A0A0MS02 117 aa13.3□□□□□ -0.28
CLPTM1-206ENST00000586975 RGS13O14921 159 aa13.3□□□□□ -0.28
CLPTM1-206ENST00000586975 CRISP2P16562 243 aa13.3□□□□□ -0.28
CLPTM1-206ENST00000586975 M6PRP20645 277 aa13.3□□□□□ -0.28
CLPTM1-206ENST00000586975 DAZ2Q13117 558 aaKnown RBP13.3□□□□□ -0.28
CLPTM1-206ENST00000586975 KHDC3LQ587J8 217 aa13.3□□□□□ -0.28
CLPTM1-206ENST00000586975 C1orf134Q5TEV5 83 aa13.3□□□□□ -0.28
CLPTM1-206ENST00000586975 Q6ZQT7 251 aa13.3□□□□□ -0.28
CLPTM1-206ENST00000586975 ZFAND2AQ8N6M9 145 aa13.3□□□□□ -0.28
CLPTM1-206ENST00000586975 HYLS1Q96M11 299 aa13.3□□□□□ -0.28
CLPTM1-206ENST00000586975 NMBP08949 121 aa13.29□□□□□ -0.28
CLPTM1-206ENST00000586975 RPH3ALQ9UNE2 315 aa13.29□□□□□ -0.28
CLPTM1-206ENST00000586975 LINC00588Q9Y4M8 146 aa13.29□□□□□ -0.28
CLPTM1-206ENST00000586975 KLF12Q9Y4X4 402 aa13.29□□□□□ -0.28
CLPTM1-206ENST00000586975 A0A1B0GVY2 172 aa13.28□□□□□ -0.28
CLPTM1-206ENST00000586975 A0A1W2PPV4 95 aa13.28□□□□□ -0.28
CLPTM1-206ENST00000586975 ACOT6Q3I5F7 207 aaPredicted RBP13.28□□□□□ -0.28
CLPTM1-206ENST00000586975 ANXA2RQ3ZCQ2 193 aa13.28□□□□□ -0.28
CLPTM1-206ENST00000586975 SSX7Q7RTT5 188 aa13.28□□□□□ -0.28
CLPTM1-206ENST00000586975 LYPD1Q8N2G4 141 aa13.28□□□□□ -0.28
CLPTM1-206ENST00000586975 C11orf72Q8NBR9 251 aa13.28□□□□□ -0.28
CLPTM1-206ENST00000586975 ZNRF2Q8NHG8 242 aa13.28□□□□□ -0.28
CLPTM1-206ENST00000586975 RXFP4Q8TDU9 374 aa13.28□□□□□ -0.28
CLPTM1-206ENST00000586975 ARPC5LQ9BPX5 153 aa13.28□□□□□ -0.28
CLPTM1-206ENST00000586975 LINC00467Q9BRT7 94 aa13.28□□□□□ -0.28
CLPTM1-206ENST00000586975 TP53TG3Q9ULZ0 132 aa13.28□□□□□ -0.28
CLPTM1-206ENST00000586975 IGHV1OR15-1A0A075B7D0 117 aa13.27□□□□□ -0.29
CLPTM1-206ENST00000586975 MED28Q9H204 178 aa13.27□□□□□ -0.29
CLPTM1-206ENST00000586975 NBDYA0A0U1RRE5 68 aa13.26□□□□□ -0.29
CLPTM1-206ENST00000586975 NACAE9PAV3 2078 aa13.26□□□□□ -0.29
CLPTM1-206ENST00000586975 HMGB3O15347 200 aaKnown RBP13.26□□□□□ -0.29
CLPTM1-206ENST00000586975 TCL1AP56279 114 aa13.26□□□□□ -0.29
CLPTM1-206ENST00000586975 RAB2AP61019 212 aa13.26□□□□□ -0.29
CLPTM1-206ENST00000586975 MUC21Q5SSG8 566 aa13.26□□□□□ -0.29
CLPTM1-206ENST00000586975 CMTM2Q8TAZ6 248 aa13.26□□□□□ -0.29
CLPTM1-206ENST00000586975 PGPA6NDG6 321 aa13.25□□□□□ -0.29
CLPTM1-206ENST00000586975 DIRC3C9JPN6 131 aa13.25□□□□□ -0.29
CLPTM1-206ENST00000586975 PTTG1O95997 202 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms