RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 IGF2BP2-AS1Q96M15 143 aa16.8■□□□□ 0.28
LSM7-202ENST00000585395 RBAKDNA6NC62 111 aa16.79■□□□□ 0.28
LSM7-202ENST00000585395 SLC25A5P05141 298 aaKnown RBP16.79■□□□□ 0.28
LSM7-202ENST00000585395 CDKN1BP46527 198 aa16.79■□□□□ 0.28
LSM7-202ENST00000585395 NKX6-2Q9C056 277 aaPredicted RBP16.79■□□□□ 0.28
LSM7-202ENST00000585395 SERTM2A0A1B0GWG4 89 aa16.78■□□□□ 0.28
LSM7-202ENST00000585395 A0A1W2PRE2 83 aa16.78■□□□□ 0.28
LSM7-202ENST00000585395 SPINK13Q1W4C9 94 aa16.78■□□□□ 0.28
LSM7-202ENST00000585395 SSX7Q7RTT5 188 aa16.78■□□□□ 0.28
LSM7-202ENST00000585395 TMEM208Q9BTX3 173 aa16.78■□□□□ 0.28
LSM7-202ENST00000585395 PCLOQ9Y6V0 5065 aa16.78■□□□□ 0.28
LSM7-202ENST00000585395 K7EQM0 130 aa16.77■□□□□ 0.28
LSM7-202ENST00000585395 H2AFB1P0C5Y9 115 aa16.77■□□□□ 0.28
LSM7-202ENST00000585395 MIFP14174 115 aa16.77■□□□□ 0.28
LSM7-202ENST00000585395 C9orf47Q6ZRZ4 202 aa16.77■□□□□ 0.28
LSM7-202ENST00000585395 C5orf17Q8NAS9 161 aa16.77■□□□□ 0.28
LSM7-202ENST00000585395 CSNK1G2-AS1Q8NCQ2 148 aa16.77■□□□□ 0.28
LSM7-202ENST00000585395 SFT2D1Q8WV19 159 aa16.77■□□□□ 0.28
LSM7-202ENST00000585395 MBD3L1Q8WWY6 194 aa16.77■□□□□ 0.28
LSM7-202ENST00000585395 PLECQ15149 4684 aaKnown RBP16.77■□□□□ 0.27
LSM7-202ENST00000585395 PPT1P50897 306 aa16.76■□□□□ 0.27
LSM7-202ENST00000585395 FGF8P55075 233 aaPredicted RBP16.76■□□□□ 0.27
LSM7-202ENST00000585395 HERC2O95714 4834 aa16.76■□□□□ 0.27
LSM7-202ENST00000585395 SMIM9A6NGZ8 99 aa16.75■□□□□ 0.27
LSM7-202ENST00000585395 ZNF705EA8MWA4 302 aaPredicted RBP16.75■□□□□ 0.27
LSM7-202ENST00000585395 DIRC3C9JPN6 131 aa16.75■□□□□ 0.27
LSM7-202ENST00000585395 M0R2Z0 102 aa16.75■□□□□ 0.27
LSM7-202ENST00000585395 SULT1A2P50226 295 aa16.75■□□□□ 0.27
LSM7-202ENST00000585395 TMEM256Q8N2U0 113 aa16.75■□□□□ 0.27
LSM7-202ENST00000585395 C20orf144Q9BQM9 153 aa16.75■□□□□ 0.27
LSM7-202ENST00000585395 RPH3ALQ9UNE2 315 aa16.75■□□□□ 0.27
LSM7-202ENST00000585395 ARL2-SNX15V9GYD0 113 aa16.75■□□□□ 0.27
LSM7-202ENST00000585395 IGKV2-40A0A087WW87 121 aaPredicted RBP16.74■□□□□ 0.27
LSM7-202ENST00000585395 TRBV7-9A0A0J9YWB2 115 aa16.74■□□□□ 0.27
LSM7-202ENST00000585395 IGKV2D-40P01614 121 aaPredicted RBP16.74■□□□□ 0.27
LSM7-202ENST00000585395 HBE1P02100 147 aa16.74■□□□□ 0.27
LSM7-202ENST00000585395 FHITP49789 147 aa16.74■□□□□ 0.27
LSM7-202ENST00000585395 ZNF138P52744 262 aa16.74■□□□□ 0.27
LSM7-202ENST00000585395 NEU1Q99519 415 aa16.74■□□□□ 0.27
LSM7-202ENST00000585395 AGPAT4-IT1Q9H0P7 198 aa16.74■□□□□ 0.27
LSM7-202ENST00000585395 ALMS1Q8TCU4 4167 aa16.73■□□□□ 0.27
LSM7-202ENST00000585395 NUPR2A6NF83 97 aa16.73■□□□□ 0.27
LSM7-202ENST00000585395 NMBP08949 121 aa16.73■□□□□ 0.27
LSM7-202ENST00000585395 NKX2-5P52952 324 aaPredicted RBP16.73■□□□□ 0.27
LSM7-202ENST00000585395 SUMO1P63165 101 aaKnown RBP16.73■□□□□ 0.27
LSM7-202ENST00000585395 ZNF705AQ6ZN79 300 aaPredicted RBP16.73■□□□□ 0.27
LSM7-202ENST00000585395 C11orf68Q9H3H3 251 aaKnown RBP16.73■□□□□ 0.27
LSM7-202ENST00000585395 IGHV3OR16-12A0A075B7B8 117 aa16.72■□□□□ 0.27
LSM7-202ENST00000585395 FBLL1A6NHQ2 334 aaKnown RBP16.72■□□□□ 0.27
LSM7-202ENST00000585395 DEFB4AO15263 64 aa16.72■□□□□ 0.27
LSM7-202ENST00000585395 CT45A10P0DMU9 189 aa16.72■□□□□ 0.27
LSM7-202ENST00000585395 PRB4P10163 310 aaPredicted RBP16.72■□□□□ 0.27
LSM7-202ENST00000585395 ERCC8Q13216 396 aa16.72■□□□□ 0.27
LSM7-202ENST00000585395 TMPRSS5Q9H3S3 457 aa16.72■□□□□ 0.27
LSM7-202ENST00000585395 PLA2G2EQ9NZK7 142 aa16.72■□□□□ 0.27
LSM7-202ENST00000585395 ZNF492Q9P255 531 aa16.72■□□□□ 0.27
LSM7-202ENST00000585395 LENEPQ9Y5L5 61 aa16.72■□□□□ 0.27
LSM7-202ENST00000585395 FRAS1Q86XX4 4008 aa16.72■□□□□ 0.27
LSM7-202ENST00000585395 IFNA7P01567 189 aa16.71■□□□□ 0.27
LSM7-202ENST00000585395 UBE2G2P60604 165 aa16.71■□□□□ 0.27
LSM7-202ENST00000585395 GOLT1AQ6ZVE7 132 aa16.71■□□□□ 0.27
LSM7-202ENST00000585395 C11orf45Q8TAV5 145 aa16.71■□□□□ 0.27
LSM7-202ENST00000585395 VGLL1Q99990 258 aa16.71■□□□□ 0.27
LSM7-202ENST00000585395 TCEAL7Q9BRU2 100 aa16.71■□□□□ 0.27
LSM7-202ENST00000585395 TRAV12-2A0A075B6T6 113 aa16.7■□□□□ 0.26
LSM7-202ENST00000585395 TMEM189A5PLL7 270 aa16.7■□□□□ 0.26
LSM7-202ENST00000585395 F6UZH7 168 aa16.7■□□□□ 0.26
LSM7-202ENST00000585395 CRXO43186 299 aaPredicted RBP16.7■□□□□ 0.26
LSM7-202ENST00000585395 NIPSNAP3BQ9BS92 247 aa16.7■□□□□ 0.26
LSM7-202ENST00000585395 NDFIP1Q9BT67 221 aa16.7■□□□□ 0.26
LSM7-202ENST00000585395 EPDR1Q9UM22 224 aa16.7■□□□□ 0.26
LSM7-202ENST00000585395 KLK5Q9Y337 293 aaPredicted RBP16.7■□□□□ 0.26
LSM7-202ENST00000585395 X6R8D5 127 aa16.7■□□□□ 0.26
LSM7-202ENST00000585395 TRAV1-1A0A0B4J248 108 aa16.69■□□□□ 0.26
LSM7-202ENST00000585395 FAM74A7A6NL05 159 aa16.69■□□□□ 0.26
LSM7-202ENST00000585395 GGTLC3B5MD39 225 aa16.69■□□□□ 0.26
LSM7-202ENST00000585395 TCRAP04437 139 aa16.69■□□□□ 0.26
LSM7-202ENST00000585395 GPX1P07203 203 aa16.69■□□□□ 0.26
LSM7-202ENST00000585395 CRISP2P16562 243 aa16.69■□□□□ 0.26
LSM7-202ENST00000585395 RRN3P1Q2M238 152 aa16.69■□□□□ 0.26
LSM7-202ENST00000585395 C1orf158Q8N1D5 194 aa16.69■□□□□ 0.26
LSM7-202ENST00000585395 ATG101Q9BSB4 218 aa16.69■□□□□ 0.26
LSM7-202ENST00000585395 IGHV4-28A0A0C4DH34 117 aa16.68■□□□□ 0.26
LSM7-202ENST00000585395 H7BYZ3 331 aa16.68■□□□□ 0.26
LSM7-202ENST00000585395 CST9LP1Q5W188 147 aa16.68■□□□□ 0.26
LSM7-202ENST00000585395 CYB561D1Q8N8Q1 229 aa16.68■□□□□ 0.26
LSM7-202ENST00000585395 HIST1H2BAQ96A08 127 aa16.68■□□□□ 0.26
LSM7-202ENST00000585395 LINC01587Q99440 93 aa16.68■□□□□ 0.26
LSM7-202ENST00000585395 A0A1B0GV50 99 aa16.67■□□□□ 0.26
LSM7-202ENST00000585395 NANOS2P60321 138 aaKnown RBP16.67■□□□□ 0.26
LSM7-202ENST00000585395 GNG5P63218 68 aa16.67■□□□□ 0.26
LSM7-202ENST00000585395 GFI1BQ5VTD9 330 aa16.67■□□□□ 0.26
LSM7-202ENST00000585395 Q8NAQ8 132 aa16.67■□□□□ 0.26
LSM7-202ENST00000585395 FAM19A4Q96LR4 140 aa16.67■□□□□ 0.26
LSM7-202ENST00000585395 MANBALQ9NQG1 85 aa16.67■□□□□ 0.26
LSM7-202ENST00000585395 YTHDF2Q9Y5A9 579 aaKnown RBP16.67■□□□□ 0.26
LSM7-202ENST00000585395 C7orf71A4D174 169 aa16.66■□□□□ 0.26
LSM7-202ENST00000585395 J3KRW8 73 aa16.66■□□□□ 0.26
LSM7-202ENST00000585395 IFNA1P01562 189 aa16.66■□□□□ 0.26
LSM7-202ENST00000585395 TAS2R60P59551 318 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms