RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 KRTAP3-1Q9BYR8 98 aa5.38□□□□□ -1.55
SMCHD1-210ENST00000583800 ZNF586Q9NXT0 402 aa5.38□□□□□ -1.55
SMCHD1-210ENST00000583800 HIGD1AQ9Y241 93 aa5.38□□□□□ -1.55
SMCHD1-210ENST00000583800 ZNF701M0R085 212 aaPredicted RBP5.37□□□□□ -1.55
SMCHD1-210ENST00000583800 CCNKO75909 580 aa5.37□□□□□ -1.55
SMCHD1-210ENST00000583800 GAGE7O76087 117 aa5.37□□□□□ -1.55
SMCHD1-210ENST00000583800 SNRPCP09234 159 aaKnown RBP5.37□□□□□ -1.55
SMCHD1-210ENST00000583800 OR5G3P0C626 314 aa5.37□□□□□ -1.55
SMCHD1-210ENST00000583800 GAGE12FP0CL80 117 aa5.37□□□□□ -1.55
SMCHD1-210ENST00000583800 GAGE12GP0CL81 117 aa5.37□□□□□ -1.55
SMCHD1-210ENST00000583800 GAGE12IP0CL82 117 aa5.37□□□□□ -1.55
SMCHD1-210ENST00000583800 SLC25A6P12236 298 aa5.37□□□□□ -1.55
SMCHD1-210ENST00000583800 M6PRP20645 277 aa5.37□□□□□ -1.55
SMCHD1-210ENST00000583800 FUSP35637 526 aaKnown RBP eCLIP5.37□□□□□ -1.55
SMCHD1-210ENST00000583800 ESRGQ1W209 222 aa5.37□□□□□ -1.55
SMCHD1-210ENST00000583800 TMEM128Q5BJH2 165 aa5.37□□□□□ -1.55
SMCHD1-210ENST00000583800 ZNF493Q6ZR52 646 aa5.37□□□□□ -1.55
SMCHD1-210ENST00000583800 LINC00612Q8N6U2 182 aa5.37□□□□□ -1.55
SMCHD1-210ENST00000583800 LRTM2Q8N967 370 aa5.37□□□□□ -1.55
SMCHD1-210ENST00000583800 OR10J6PQ8NGY7 276 aa5.37□□□□□ -1.55
SMCHD1-210ENST00000583800 LRRC20Q8TCA0 184 aa5.37□□□□□ -1.55
SMCHD1-210ENST00000583800 RPUSD4Q96CM3 377 aaKnown RBP5.37□□□□□ -1.55
SMCHD1-210ENST00000583800 MRPS16Q9Y3D3 137 aaKnown RBP5.37□□□□□ -1.55
SMCHD1-210ENST00000583800 PIGBOS1A0A0B4J2F0 54 aa5.36□□□□□ -1.55
SMCHD1-210ENST00000583800 GAGE12JA6NER3 117 aa5.36□□□□□ -1.55
SMCHD1-210ENST00000583800 EPM2AB3EWF7 344 aa5.36□□□□□ -1.55
SMCHD1-210ENST00000583800 H7BYZ3 331 aa5.36□□□□□ -1.55
SMCHD1-210ENST00000583800 MRPS12O15235 138 aaKnown RBP5.36□□□□□ -1.55
SMCHD1-210ENST00000583800 HYPMO75409 117 aa5.36□□□□□ -1.55
SMCHD1-210ENST00000583800 SFT2D2O95562 160 aa5.36□□□□□ -1.55
SMCHD1-210ENST00000583800 RLN2P04090 185 aa5.36□□□□□ -1.55
SMCHD1-210ENST00000583800 LINC00315P59091 139 aa5.36□□□□□ -1.55
SMCHD1-210ENST00000583800 PLP1P60201 277 aa5.36□□□□□ -1.55
SMCHD1-210ENST00000583800 RRAS2P62070 204 aaPredicted RBP5.36□□□□□ -1.55
SMCHD1-210ENST00000583800 PPP1R1AQ13522 171 aa5.36□□□□□ -1.55
SMCHD1-210ENST00000583800 GFI1BQ5VTD9 330 aa5.36□□□□□ -1.55
SMCHD1-210ENST00000583800 PATE2Q6UY27 113 aa5.36□□□□□ -1.55
SMCHD1-210ENST00000583800 DYNC2LI1Q8TCX1 351 aa5.36□□□□□ -1.55
SMCHD1-210ENST00000583800 VCX2Q9H322 139 aa5.36□□□□□ -1.55
SMCHD1-210ENST00000583800 CCDC59Q9P031 241 aaKnown RBP5.36□□□□□ -1.55
SMCHD1-210ENST00000583800 RSL24D1Q9UHA3 163 aaKnown RBP5.36□□□□□ -1.55
SMCHD1-210ENST00000583800 DMBT1Q9UGM3 2413 aaPredicted RBP5.36□□□□□ -1.55
SMCHD1-210ENST00000583800 MYCBP2O75592 4640 aa5.36□□□□□ -1.55
SMCHD1-210ENST00000583800 FABP12A6NFH5 140 aa5.35□□□□□ -1.55
SMCHD1-210ENST00000583800 PMS2P5A8MQ11 134 aa5.35□□□□□ -1.55
SMCHD1-210ENST00000583800 SNURFLB1AK76 121 aa5.35□□□□□ -1.55
SMCHD1-210ENST00000583800 PRAC2D3DTV9 90 aa5.35□□□□□ -1.55
SMCHD1-210ENST00000583800 H3BTX0 84 aa5.35□□□□□ -1.55
SMCHD1-210ENST00000583800 SLC17A3O00476 420 aa5.35□□□□□ -1.55
SMCHD1-210ENST00000583800 ADAP1O75689 374 aa5.35□□□□□ -1.55
SMCHD1-210ENST00000583800 SLPIP03973 132 aa5.35□□□□□ -1.55
SMCHD1-210ENST00000583800 FAUP35544 74 aaKnown RBP5.35□□□□□ -1.55
SMCHD1-210ENST00000583800 SEC61BP60468 96 aaKnown RBP5.35□□□□□ -1.55
SMCHD1-210ENST00000583800 POLR2GP62487 172 aaKnown RBP eCLIP5.35□□□□□ -1.55
SMCHD1-210ENST00000583800 SLC38A11Q08AI6 406 aa5.35□□□□□ -1.55
SMCHD1-210ENST00000583800 FAM159AQ6UWV7 190 aa5.35□□□□□ -1.55
SMCHD1-210ENST00000583800 Q6ZRN7 208 aaPredicted RBP5.35□□□□□ -1.55
SMCHD1-210ENST00000583800 C20orf144Q9BQM9 153 aa5.35□□□□□ -1.55
SMCHD1-210ENST00000583800 ARL6Q9H0F7 186 aa5.35□□□□□ -1.55
SMCHD1-210ENST00000583800 ARV1Q9H2C2 271 aa5.35□□□□□ -1.55
SMCHD1-210ENST00000583800 ZNF331Q9NQX6 463 aaPredicted RBP5.35□□□□□ -1.55
SMCHD1-210ENST00000583800 PSENENQ9NZ42 101 aa5.35□□□□□ -1.55
SMCHD1-210ENST00000583800 A0A096LPF7 62 aa5.34□□□□□ -1.55
SMCHD1-210ENST00000583800 LINC00854A0A1B0GVQ3 168 aa5.34□□□□□ -1.55
SMCHD1-210ENST00000583800 H0Y8G0 127 aa5.34□□□□□ -1.55
SMCHD1-210ENST00000583800 K7EQM0 130 aa5.34□□□□□ -1.55
SMCHD1-210ENST00000583800 SSSCA1O60232 199 aa5.34□□□□□ -1.55
SMCHD1-210ENST00000583800 INAFM2P0DMQ5 153 aa5.34□□□□□ -1.55
SMCHD1-210ENST00000583800 CXCL2P19875 107 aa5.34□□□□□ -1.55
SMCHD1-210ENST00000583800 SELENOTP62341 195 aa5.34□□□□□ -1.55
SMCHD1-210ENST00000583800 LCN15Q6UWW0 184 aa5.34□□□□□ -1.55
SMCHD1-210ENST00000583800 Q6ZTI0 123 aa5.34□□□□□ -1.55
SMCHD1-210ENST00000583800 TOMM5Q8N4H5 51 aa5.34□□□□□ -1.55
SMCHD1-210ENST00000583800 MCFD2Q8NI22 146 aa5.34□□□□□ -1.55
SMCHD1-210ENST00000583800 VSIG2Q96IQ7 327 aa5.34□□□□□ -1.55
SMCHD1-210ENST00000583800 SOSTQ9BQB4 213 aa5.34□□□□□ -1.55
SMCHD1-210ENST00000583800 SLC50A1Q9BRV3 221 aa5.34□□□□□ -1.55
SMCHD1-210ENST00000583800 MRPS26Q9BYN8 205 aaKnown RBP5.34□□□□□ -1.55
SMCHD1-210ENST00000583800 SLIRPQ9GZT3 109 aaKnown RBP5.34□□□□□ -1.55
SMCHD1-210ENST00000583800 PAM16Q9Y3D7 125 aa5.34□□□□□ -1.55
SMCHD1-210ENST00000583800 VPS13BQ7Z7G8 4022 aa5.33□□□□□ -1.56
SMCHD1-210ENST00000583800 FLG2Q5D862 2391 aaPredicted RBP5.33□□□□□ -1.56
SMCHD1-210ENST00000583800 TRAV12-3A0A0B4J271 114 aa5.33□□□□□ -1.56
SMCHD1-210ENST00000583800 H3BNG1 76 aa5.33□□□□□ -1.56
SMCHD1-210ENST00000583800 METTL15P1P0C7V9 234 aa5.33□□□□□ -1.56
SMCHD1-210ENST00000583800 XGP55808 180 aa5.33□□□□□ -1.56
SMCHD1-210ENST00000583800 Q5VSD8 79 aa5.33□□□□□ -1.56
SMCHD1-210ENST00000583800 MORN5Q5VZ52 161 aa5.33□□□□□ -1.56
SMCHD1-210ENST00000583800 LINC00305Q7Z4B0 112 aa5.33□□□□□ -1.56
SMCHD1-210ENST00000583800 LYPD1Q8N2G4 141 aa5.33□□□□□ -1.56
SMCHD1-210ENST00000583800 RAB2BQ8WUD1 216 aa5.33□□□□□ -1.56
SMCHD1-210ENST00000583800 SLC25A21Q9BQT8 299 aaPredicted RBP5.33□□□□□ -1.56
SMCHD1-210ENST00000583800 TNFRSF18Q9Y5U5 241 aa5.33□□□□□ -1.56
SMCHD1-210ENST00000583800 TRGV2A0A075B6R0 118 aa5.32□□□□□ -1.56
SMCHD1-210ENST00000583800 K7EPK0 472 aa5.32□□□□□ -1.56
SMCHD1-210ENST00000583800 SIVA1O15304 175 aa5.32□□□□□ -1.56
SMCHD1-210ENST00000583800 DNAH10OSP0CZ25 163 aa5.32□□□□□ -1.56
SMCHD1-210ENST00000583800 CT45A10P0DMU9 189 aa5.32□□□□□ -1.56
SMCHD1-210ENST00000583800 AP3S2P59780 193 aa5.32□□□□□ -1.56
SMCHD1-210ENST00000583800 ERVFC1-1P60608 527 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms