RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 SPAG8Q99932 426 aaPredicted RBP13.59□□□□□ -0.23
NDEL1-217ENST00000583683 ZNF727A8MUV8 499 aa13.58□□□□□ -0.24
NDEL1-217ENST00000583683 B4DEV8 164 aa13.58□□□□□ -0.24
NDEL1-217ENST00000583683 ID1P41134 155 aa13.58□□□□□ -0.24
NDEL1-217ENST00000583683 CSN1S1P47710 185 aa13.58□□□□□ -0.24
NDEL1-217ENST00000583683 MRPL53Q96EL3 112 aaKnown RBP13.58□□□□□ -0.24
NDEL1-217ENST00000583683 PARLQ9H300 379 aa13.58□□□□□ -0.24
NDEL1-217ENST00000583683 ZNF256Q9Y2P7 627 aaPredicted RBP13.58□□□□□ -0.24
NDEL1-217ENST00000583683 HIST1H2BKO60814 126 aa13.57□□□□□ -0.24
NDEL1-217ENST00000583683 HIST1H2BJP06899 126 aa13.57□□□□□ -0.24
NDEL1-217ENST00000583683 HIST1H2BOP23527 126 aa13.57□□□□□ -0.24
NDEL1-217ENST00000583683 HIST1H2BBP33778 126 aa13.57□□□□□ -0.24
NDEL1-217ENST00000583683 INSL3P51460 131 aa13.57□□□□□ -0.24
NDEL1-217ENST00000583683 HIST1H2BDP58876 126 aa13.57□□□□□ -0.24
NDEL1-217ENST00000583683 HIST1H2BCP62807 126 aa13.57□□□□□ -0.24
NDEL1-217ENST00000583683 HIST2H2BEQ16778 126 aa13.57□□□□□ -0.24
NDEL1-217ENST00000583683 ZNF674Q2M3X9 581 aa13.57□□□□□ -0.24
NDEL1-217ENST00000583683 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.57□□□□□ -0.24
NDEL1-217ENST00000583683 C9orf66Q5T8R8 295 aa13.57□□□□□ -0.24
NDEL1-217ENST00000583683 GOLT1AQ6ZVE7 132 aa13.57□□□□□ -0.24
NDEL1-217ENST00000583683 OR2K2Q8NGT1 345 aa13.57□□□□□ -0.24
NDEL1-217ENST00000583683 HIST1H2BHQ93079 126 aa13.57□□□□□ -0.24
NDEL1-217ENST00000583683 HIST1H2BNQ99877 126 aa13.57□□□□□ -0.24
NDEL1-217ENST00000583683 HIST1H2BMQ99879 126 aa13.57□□□□□ -0.24
NDEL1-217ENST00000583683 NOTCH3Q9UM47 2321 aa13.57□□□□□ -0.24
NDEL1-217ENST00000583683 PRAC2D3DTV9 90 aa13.57□□□□□ -0.24
NDEL1-217ENST00000583683 ZNF688P0C7X2 276 aa13.57□□□□□ -0.24
NDEL1-217ENST00000583683 SNRPD3P62318 126 aaKnown RBP13.57□□□□□ -0.24
NDEL1-217ENST00000583683 HIST3H2BBQ8N257 126 aa13.57□□□□□ -0.24
NDEL1-217ENST00000583683 RIPPLY3P57055 190 aa13.56□□□□□ -0.24
NDEL1-217ENST00000583683 ZNF738Q8NE65 137 aa13.56□□□□□ -0.24
NDEL1-217ENST00000583683 MCRIP2Q9BUT9 160 aaKnown RBP13.56□□□□□ -0.24
NDEL1-217ENST00000583683 KLF12Q9Y4X4 402 aa13.56□□□□□ -0.24
NDEL1-217ENST00000583683 IGKV2-40A0A087WW87 121 aaPredicted RBP13.55□□□□□ -0.24
NDEL1-217ENST00000583683 TRAV34A0A0B4J273 112 aa13.55□□□□□ -0.24
NDEL1-217ENST00000583683 OR4C46A6NHA9 309 aa13.55□□□□□ -0.24
NDEL1-217ENST00000583683 IGKV2D-40P01614 121 aaPredicted RBP13.55□□□□□ -0.24
NDEL1-217ENST00000583683 SGK494Q96LW2 274 aa13.55□□□□□ -0.24
NDEL1-217ENST00000583683 NIPSNAP3BQ9BS92 247 aa13.55□□□□□ -0.24
NDEL1-217ENST00000583683 TMEM242Q9NWH2 141 aa13.55□□□□□ -0.24
NDEL1-217ENST00000583683 TRBV20OR9-2A0A075B6H5 130 aa13.55□□□□□ -0.24
NDEL1-217ENST00000583683 TRAV8-1A0A0A6YYK1 113 aa13.55□□□□□ -0.24
NDEL1-217ENST00000583683 TGIF2-C20orf24A0A0A6YYL0 155 aa13.55□□□□□ -0.24
NDEL1-217ENST00000583683 IGLV2-11P01706 119 aa13.55□□□□□ -0.24
NDEL1-217ENST00000583683 CNN1P51911 297 aaKnown RBP13.55□□□□□ -0.24
NDEL1-217ENST00000583683 PSMG4Q5JS54 123 aa13.55□□□□□ -0.24
NDEL1-217ENST00000583683 CDPF1Q6NVV7 123 aa13.55□□□□□ -0.24
NDEL1-217ENST00000583683 SMIM7Q9BQ49 75 aa13.55□□□□□ -0.24
NDEL1-217ENST00000583683 SERTM2A0A1B0GWG4 89 aa13.54□□□□□ -0.24
NDEL1-217ENST00000583683 PHOX2AO14813 284 aa13.54□□□□□ -0.24
NDEL1-217ENST00000583683 DEFB1P60022 68 aa13.54□□□□□ -0.24
NDEL1-217ENST00000583683 SSTP61278 116 aa13.54□□□□□ -0.24
NDEL1-217ENST00000583683 TMEM183BQ1AE95 376 aa13.54□□□□□ -0.24
NDEL1-217ENST00000583683 PKD1L1Q8TDX9 2849 aa13.53□□□□□ -0.24
NDEL1-217ENST00000583683 K7EQM0 130 aa13.53□□□□□ -0.24
NDEL1-217ENST00000583683 IGLL1P15814 213 aa13.53□□□□□ -0.24
NDEL1-217ENST00000583683 DEFA6Q01524 100 aa13.53□□□□□ -0.24
NDEL1-217ENST00000583683 PNRC1Q12796 327 aaPredicted RBP13.53□□□□□ -0.24
NDEL1-217ENST00000583683 OR10D4PQ8NGN7 298 aa13.53□□□□□ -0.24
NDEL1-217ENST00000583683 F6UB75 175 aa13.53□□□□□ -0.24
NDEL1-217ENST00000583683 PPP1R2P9O14990 202 aa13.53□□□□□ -0.24
NDEL1-217ENST00000583683 TMEM75Q8N9X5 138 aa13.53□□□□□ -0.24
NDEL1-217ENST00000583683 FMC1Q96HJ9 113 aa13.53□□□□□ -0.24
NDEL1-217ENST00000583683 VGLL1Q99990 258 aa13.53□□□□□ -0.24
NDEL1-217ENST00000583683 RBAKDNA6NC62 111 aa13.52□□□□□ -0.25
NDEL1-217ENST00000583683 UBE2G1P62253 170 aa13.52□□□□□ -0.25
NDEL1-217ENST00000583683 IGF2BP2-AS1Q96M15 143 aa13.52□□□□□ -0.25
NDEL1-217ENST00000583683 ANK2Q01484 3957 aa13.51□□□□□ -0.25
NDEL1-217ENST00000583683 WIPF1O43516 503 aa13.51□□□□□ -0.25
NDEL1-217ENST00000583683 TRGC2P03986 189 aa13.51□□□□□ -0.25
NDEL1-217ENST00000583683 ZNF705DP0CH99 300 aaPredicted RBP13.51□□□□□ -0.25
NDEL1-217ENST00000583683 ZNF705BP0CI00 300 aaPredicted RBP13.51□□□□□ -0.25
NDEL1-217ENST00000583683 TAS2R60P59551 318 aa13.51□□□□□ -0.25
NDEL1-217ENST00000583683 BEAN1Q3B7T3 259 aa13.51□□□□□ -0.25
NDEL1-217ENST00000583683 CENPWQ5EE01 88 aa13.51□□□□□ -0.25
NDEL1-217ENST00000583683 C14orf144Q96I85 54 aa13.51□□□□□ -0.25
NDEL1-217ENST00000583683 MAP6D1Q9H9H5 199 aa13.51□□□□□ -0.25
NDEL1-217ENST00000583683 TRBV24-1A0A075B6N3 115 aa13.5□□□□□ -0.25
NDEL1-217ENST00000583683 PGPEP1LA6NFU8 196 aa13.5□□□□□ -0.25
NDEL1-217ENST00000583683 C9JCJ5 164 aa13.5□□□□□ -0.25
NDEL1-217ENST00000583683 TRGC1P0CF51 173 aa13.5□□□□□ -0.25
NDEL1-217ENST00000583683 DEFB131AP59861 70 aa13.5□□□□□ -0.25
NDEL1-217ENST00000583683 ERCC8Q13216 396 aa13.5□□□□□ -0.25
NDEL1-217ENST00000583683 ODF3L2Q3SX64 289 aa13.5□□□□□ -0.25
NDEL1-217ENST00000583683 GDF5OSQ5U4N7 250 aa13.5□□□□□ -0.25
NDEL1-217ENST00000583683 C9orf47Q6ZRZ4 202 aa13.5□□□□□ -0.25
NDEL1-217ENST00000583683 OR8A1Q8NGG7 326 aa13.5□□□□□ -0.25
NDEL1-217ENST00000583683 FAM210BQ96KR6 192 aa13.5□□□□□ -0.25
NDEL1-217ENST00000583683 GPR61Q9BZJ8 451 aa13.5□□□□□ -0.25
NDEL1-217ENST00000583683 GNG4P50150 75 aa13.5□□□□□ -0.25
NDEL1-217ENST00000583683 PKIAP61925 76 aa13.5□□□□□ -0.25
NDEL1-217ENST00000583683 Q86TA4 180 aa13.5□□□□□ -0.25
NDEL1-217ENST00000583683 FRZBQ92765 325 aa13.5□□□□□ -0.25
NDEL1-217ENST00000583683 AGPAT4-IT1Q9H0P7 198 aa13.5□□□□□ -0.25
NDEL1-217ENST00000583683 PSG8Q9UQ74 426 aa13.5□□□□□ -0.25
NDEL1-217ENST00000583683 AGRNO00468 2067 aa13.5□□□□□ -0.25
NDEL1-217ENST00000583683 TRBV6-1A0A0K0K1D8 114 aa13.49□□□□□ -0.25
NDEL1-217ENST00000583683 LTAP01374 205 aa13.49□□□□□ -0.25
NDEL1-217ENST00000583683 TMEM241Q24JQ0 296 aa13.49□□□□□ -0.25
NDEL1-217ENST00000583683 GFI1BQ5VTD9 330 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms