RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 GCHFRP30047 84 aa17.85■□□□□ 0.45
TSEN54-209ENST00000583454 NANOS2P60321 138 aaKnown RBP17.85■□□□□ 0.45
TSEN54-209ENST00000583454 ERCC8Q13216 396 aa17.85■□□□□ 0.45
TSEN54-209ENST00000583454 ZNF726P1Q15940 193 aa17.85■□□□□ 0.45
TSEN54-209ENST00000583454 AKR1C8PQ5T2L2 129 aa17.85■□□□□ 0.45
TSEN54-209ENST00000583454 SSX7Q7RTT5 188 aa17.85■□□□□ 0.45
TSEN54-209ENST00000583454 HERC2O95714 4834 aa17.84■□□□□ 0.45
TSEN54-209ENST00000583454 CXorf1O96002 111 aa17.84■□□□□ 0.45
TSEN54-209ENST00000583454 C1QBP02746 253 aa17.84■□□□□ 0.45
TSEN54-209ENST00000583454 C11orf45Q8TAV5 145 aa17.84■□□□□ 0.45
TSEN54-209ENST00000583454 FAM19A4Q96LR4 140 aa17.84■□□□□ 0.45
TSEN54-209ENST00000583454 ZNF471Q9BX82 626 aaPredicted RBP17.84■□□□□ 0.45
TSEN54-209ENST00000583454 IGKV2-40A0A087WW87 121 aaPredicted RBP17.83■□□□□ 0.44
TSEN54-209ENST00000583454 CTXND1A0A1B0GTU2 59 aa17.83■□□□□ 0.44
TSEN54-209ENST00000583454 IGKV2D-40P01614 121 aaPredicted RBP17.83■□□□□ 0.44
TSEN54-209ENST00000583454 LEPP41159 167 aa17.83■□□□□ 0.44
TSEN54-209ENST00000583454 CSN1S1P47710 185 aa17.83■□□□□ 0.44
TSEN54-209ENST00000583454 KIR3DS1Q14943 382 aa17.83■□□□□ 0.44
TSEN54-209ENST00000583454 LGALS9CQ6DKI2 356 aa17.83■□□□□ 0.44
TSEN54-209ENST00000583454 AKAP14Q86UN6 197 aa17.83■□□□□ 0.44
TSEN54-209ENST00000583454 RXFP4Q8TDU9 374 aa17.83■□□□□ 0.44
TSEN54-209ENST00000583454 VGLL1Q99990 258 aa17.83■□□□□ 0.44
TSEN54-209ENST00000583454 TMEM208Q9BTX3 173 aa17.83■□□□□ 0.44
TSEN54-209ENST00000583454 RBAKDNA6NC62 111 aa17.82■□□□□ 0.44
TSEN54-209ENST00000583454 PGPA6NDG6 321 aa17.82■□□□□ 0.44
TSEN54-209ENST00000583454 HBE1P02100 147 aa17.82■□□□□ 0.44
TSEN54-209ENST00000583454 SEC11BP0C7V7 166 aa17.82■□□□□ 0.44
TSEN54-209ENST00000583454 LGALSLQ3ZCW2 172 aaPredicted RBP17.82■□□□□ 0.44
TSEN54-209ENST00000583454 TMEM256Q8N2U0 113 aa17.82■□□□□ 0.44
TSEN54-209ENST00000583454 ARL6IP6Q8N6S5 226 aa17.82■□□□□ 0.44
TSEN54-209ENST00000583454 TMEM167BQ9NRX6 74 aa17.82■□□□□ 0.44
TSEN54-209ENST00000583454 PLA2G2EQ9NZK7 142 aa17.82■□□□□ 0.44
TSEN54-209ENST00000583454 TMEM189A5PLL7 270 aa17.81■□□□□ 0.44
TSEN54-209ENST00000583454 DIRC3C9JPN6 131 aa17.81■□□□□ 0.44
TSEN54-209ENST00000583454 PFDN1O60925 122 aa17.81■□□□□ 0.44
TSEN54-209ENST00000583454 SLC25A5P05141 298 aaKnown RBP17.81■□□□□ 0.44
TSEN54-209ENST00000583454 EIF5AP63241 154 aaKnown RBP17.81■□□□□ 0.44
TSEN54-209ENST00000583454 C20orf144Q9BQM9 153 aa17.81■□□□□ 0.44
TSEN54-209ENST00000583454 RRN3P1Q2M238 152 aa17.8■□□□□ 0.44
TSEN54-209ENST00000583454 FAM74A1Q5RGS3 127 aa17.8■□□□□ 0.44
TSEN54-209ENST00000583454 TMEM78Q5T7P6 136 aa17.8■□□□□ 0.44
TSEN54-209ENST00000583454 GFI1BQ5VTD9 330 aa17.8■□□□□ 0.44
TSEN54-209ENST00000583454 HYLS1Q96M11 299 aa17.8■□□□□ 0.44
TSEN54-209ENST00000583454 A0A1B0GVG6 124 aa17.79■□□□□ 0.44
TSEN54-209ENST00000583454 CRISP2P16562 243 aa17.79■□□□□ 0.44
TSEN54-209ENST00000583454 ZNF492Q9P255 531 aa17.79■□□□□ 0.44
TSEN54-209ENST00000583454 KLLNB2CW77 178 aa17.78■□□□□ 0.44
TSEN54-209ENST00000583454 NMBP08949 121 aa17.78■□□□□ 0.44
TSEN54-209ENST00000583454 ZNF138P52744 262 aa17.78■□□□□ 0.44
TSEN54-209ENST00000583454 STOML3Q8TAV4 291 aa17.78■□□□□ 0.44
TSEN54-209ENST00000583454 CMTM2Q8TAZ6 248 aa17.78■□□□□ 0.44
TSEN54-209ENST00000583454 LINC01587Q99440 93 aa17.78■□□□□ 0.44
TSEN54-209ENST00000583454 TRBV7-9A0A0J9YWB2 115 aa17.77■□□□□ 0.44
TSEN54-209ENST00000583454 LOC102723971A0A1B0GUV8 181 aa17.77■□□□□ 0.44
TSEN54-209ENST00000583454 ZNF705GA8MUZ8 300 aaPredicted RBP17.77■□□□□ 0.44
TSEN54-209ENST00000583454 UMAD1C9J7I0 102 aa17.77■□□□□ 0.44
TSEN54-209ENST00000583454 H7BYZ3 331 aa17.77■□□□□ 0.44
TSEN54-209ENST00000583454 PRM2P04554 102 aa17.77■□□□□ 0.44
TSEN54-209ENST00000583454 TAS2R60P59551 318 aa17.77■□□□□ 0.44
TSEN54-209ENST00000583454 CD300CQ08708 224 aa17.77■□□□□ 0.44
TSEN54-209ENST00000583454 CELA1Q9UNI1 258 aa17.77■□□□□ 0.44
TSEN54-209ENST00000583454 TPT1P13693 172 aaKnown RBP17.76■□□□□ 0.43
TSEN54-209ENST00000583454 J3KRW8 73 aa17.75■□□□□ 0.43
TSEN54-209ENST00000583454 FHITP49789 147 aa17.75■□□□□ 0.43
TSEN54-209ENST00000583454 EMP1P54849 157 aa17.75■□□□□ 0.43
TSEN54-209ENST00000583454 ZFAND2AQ8N6M9 145 aa17.75■□□□□ 0.43
TSEN54-209ENST00000583454 TMED6Q8WW62 240 aa17.75■□□□□ 0.43
TSEN54-209ENST00000583454 TMPRSS5Q9H3S3 457 aa17.75■□□□□ 0.43
TSEN54-209ENST00000583454 DNAH2Q9P225 4427 aa17.75■□□□□ 0.43
TSEN54-209ENST00000583454 TRAV12-3A0A0B4J271 114 aa17.74■□□□□ 0.43
TSEN54-209ENST00000583454 A0A1W2PRE2 83 aa17.74■□□□□ 0.43
TSEN54-209ENST00000583454 MAP1LC3B2A6NCE7 125 aa17.74■□□□□ 0.43
TSEN54-209ENST00000583454 AZU1P20160 251 aa17.74■□□□□ 0.43
TSEN54-209ENST00000583454 FGF8P55075 233 aaPredicted RBP17.74■□□□□ 0.43
TSEN54-209ENST00000583454 C5orf17Q8NAS9 161 aa17.74■□□□□ 0.43
TSEN54-209ENST00000583454 MAP1LC3BQ9GZQ8 125 aa17.74■□□□□ 0.43
TSEN54-209ENST00000583454 DNAH17Q9UFH2 4485 aa17.73■□□□□ 0.43
TSEN54-209ENST00000583454 FAT2Q9NYQ8 4349 aa17.73■□□□□ 0.43
TSEN54-209ENST00000583454 C7orf71A4D174 169 aa17.73■□□□□ 0.43
TSEN54-209ENST00000583454 GGTLC3B5MD39 225 aa17.73■□□□□ 0.43
TSEN54-209ENST00000583454 ZNF324O75467 553 aaPredicted RBP17.73■□□□□ 0.43
TSEN54-209ENST00000583454 SPART-AS1P0CW21 52 aa17.73■□□□□ 0.43
TSEN54-209ENST00000583454 C12orf74Q32Q52 190 aa17.73■□□□□ 0.43
TSEN54-209ENST00000583454 GOLT1AQ6ZVE7 132 aa17.73■□□□□ 0.43
TSEN54-209ENST00000583454 IQCF2Q8IXL9 164 aa17.73■□□□□ 0.43
TSEN54-209ENST00000583454 Q8TAT8 98 aa17.73■□□□□ 0.43
TSEN54-209ENST00000583454 MBD3L1Q8WWY6 194 aa17.73■□□□□ 0.43
TSEN54-209ENST00000583454 DKK2Q9UBU2 259 aa17.73■□□□□ 0.43
TSEN54-209ENST00000583454 LENEPQ9Y5L5 61 aa17.73■□□□□ 0.43
TSEN54-209ENST00000583454 GPX1P07203 203 aa17.72■□□□□ 0.43
TSEN54-209ENST00000583454 SUMO1P63165 101 aaKnown RBP17.72■□□□□ 0.43
TSEN54-209ENST00000583454 DPPA3Q6W0C5 159 aa17.72■□□□□ 0.43
TSEN54-209ENST00000583454 C2CD4CQ8TF44 421 aa17.72■□□□□ 0.43
TSEN54-209ENST00000583454 NIPSNAP3BQ9BS92 247 aa17.72■□□□□ 0.43
TSEN54-209ENST00000583454 RPH3ALQ9UNE2 315 aa17.72■□□□□ 0.43
TSEN54-209ENST00000583454 YTHDF2Q9Y5A9 579 aaKnown RBP17.72■□□□□ 0.43
TSEN54-209ENST00000583454 PLAC8L1A1L4L8 177 aa17.71■□□□□ 0.43
TSEN54-209ENST00000583454 RNASE4P34096 147 aaKnown RBP17.71■□□□□ 0.43
TSEN54-209ENST00000583454 GNG5P63218 68 aa17.71■□□□□ 0.43
TSEN54-209ENST00000583454 BTN1A1Q13410 526 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms