RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 NPBQ8NG41 125 aa10.64□□□□□ -0.71
GGA3-214ENST00000582717 OR2K2Q8NGT1 345 aa10.64□□□□□ -0.71
GGA3-214ENST00000582717 IFI27L1Q96BM0 104 aa10.64□□□□□ -0.71
GGA3-214ENST00000582717 JMJD8Q96S16 334 aa10.64□□□□□ -0.71
GGA3-214ENST00000582717 BPESC1Q9GZL8 116 aa10.64□□□□□ -0.71
GGA3-214ENST00000582717 IGSF10Q6WRI0 2623 aa10.64□□□□□ -0.71
GGA3-214ENST00000582717 LOC389332A0A1B0GUA5 103 aa10.64□□□□□ -0.71
GGA3-214ENST00000582717 H3BUT2 72 aa10.64□□□□□ -0.71
GGA3-214ENST00000582717 MRPS12O15235 138 aaKnown RBP10.64□□□□□ -0.71
GGA3-214ENST00000582717 PAX8Q06710 450 aa10.64□□□□□ -0.71
GGA3-214ENST00000582717 PIFOQ8TCI5 191 aa10.64□□□□□ -0.71
GGA3-214ENST00000582717 RNF125Q96EQ8 232 aa10.64□□□□□ -0.71
GGA3-214ENST00000582717 C17orf77Q96MU5 243 aa10.64□□□□□ -0.71
GGA3-214ENST00000582717 AAMDCQ9H7C9 122 aa10.64□□□□□ -0.71
GGA3-214ENST00000582717 THYN1Q9P016 225 aa10.64□□□□□ -0.71
GGA3-214ENST00000582717 FBLL1A6NHQ2 334 aaKnown RBP10.63□□□□□ -0.71
GGA3-214ENST00000582717 K7EIM0 57 aa10.63□□□□□ -0.71
GGA3-214ENST00000582717 ZNF491Q8N8L2 437 aa10.63□□□□□ -0.71
GGA3-214ENST00000582717 G3V4G9 280 aa10.63□□□□□ -0.71
GGA3-214ENST00000582717 LMO4P61968 165 aa10.63□□□□□ -0.71
GGA3-214ENST00000582717 AMN1Q8IY45 258 aa10.63□□□□□ -0.71
GGA3-214ENST00000582717 ABCA1O95477 2261 aa10.63□□□□□ -0.71
GGA3-214ENST00000582717 WI2-2373I1.2A0A1W2PRP0 233 aa10.62□□□□□ -0.71
GGA3-214ENST00000582717 TMEM213A2RRL7 107 aa10.62□□□□□ -0.71
GGA3-214ENST00000582717 SAP30O75446 220 aa10.62□□□□□ -0.71
GGA3-214ENST00000582717 C5orf64Q2M2E5 130 aa10.62□□□□□ -0.71
GGA3-214ENST00000582717 MRPL51Q4U2R6 128 aaKnown RBP10.62□□□□□ -0.71
GGA3-214ENST00000582717 NEGR1Q7Z3B1 354 aa10.62□□□□□ -0.71
GGA3-214ENST00000582717 C8orf49Q96NF6 230 aa10.62□□□□□ -0.71
GGA3-214ENST00000582717 A0A1W2PPM0 123 aa10.61□□□□□ -0.71
GGA3-214ENST00000582717 SH2D1AO60880 128 aa10.61□□□□□ -0.71
GGA3-214ENST00000582717 IGHV4-39P01824 125 aa10.61□□□□□ -0.71
GGA3-214ENST00000582717 ACACBO00763 2458 aa10.61□□□□□ -0.71
GGA3-214ENST00000582717 IL4P05112 153 aa10.61□□□□□ -0.71
GGA3-214ENST00000582717 CKS2P33552 79 aa10.61□□□□□ -0.71
GGA3-214ENST00000582717 LINC01559Q495D7 138 aa10.61□□□□□ -0.71
GGA3-214ENST00000582717 MINOS1Q5TGZ0 78 aa10.61□□□□□ -0.71
GGA3-214ENST00000582717 CCDC144NLQ6NUI1 221 aa10.61□□□□□ -0.71
GGA3-214ENST00000582717 Q8N6K4 173 aa10.61□□□□□ -0.71
GGA3-214ENST00000582717 MINOS1-NBL1R4GNA1 71 aa10.61□□□□□ -0.71
GGA3-214ENST00000582717 M0R3E3 92 aa10.6□□□□□ -0.71
GGA3-214ENST00000582717 SMIM17P0DL12 118 aa10.6□□□□□ -0.71
GGA3-214ENST00000582717 ASCL2Q99929 193 aa10.6□□□□□ -0.71
GGA3-214ENST00000582717 SPTAN1Q13813 2472 aaKnown RBP10.6□□□□□ -0.71
GGA3-214ENST00000582717 LINC01546A6NGU7 62 aa10.6□□□□□ -0.71
GGA3-214ENST00000582717 OOSP1A8MZH6 123 aa10.6□□□□□ -0.71
GGA3-214ENST00000582717 FCGR2BP31994 310 aaPredicted RBP10.6□□□□□ -0.71
GGA3-214ENST00000582717 NDPQ00604 133 aa10.6□□□□□ -0.71
GGA3-214ENST00000582717 AJUBAQ96IF1 538 aa10.6□□□□□ -0.71
GGA3-214ENST00000582717 HIGD1BQ9P298 99 aa10.6□□□□□ -0.71
GGA3-214ENST00000582717 SPCS1Q9Y6A9 102 aa10.6□□□□□ -0.71
GGA3-214ENST00000582717 FABP2P12104 132 aa10.59□□□□□ -0.71
GGA3-214ENST00000582717 BMI1P35226 326 aa10.59□□□□□ -0.71
GGA3-214ENST00000582717 NMUP48645 174 aa10.59□□□□□ -0.71
GGA3-214ENST00000582717 EBI3Q14213 229 aa10.59□□□□□ -0.71
GGA3-214ENST00000582717 KLF17Q5JT82 389 aaPredicted RBP10.59□□□□□ -0.71
GGA3-214ENST00000582717 ZNF48Q96MX3 618 aaPredicted RBP10.59□□□□□ -0.71
GGA3-214ENST00000582717 NCBP2LA6PVI3 153 aaKnown RBP10.59□□□□□ -0.71
GGA3-214ENST00000582717 NPYP01303 97 aa10.59□□□□□ -0.71
GGA3-214ENST00000582717 SRSF2Q01130 221 aaKnown RBP10.59□□□□□ -0.71
GGA3-214ENST00000582717 CSMD1Q96PZ7 3565 aa10.59□□□□□ -0.71
GGA3-214ENST00000582717 COL12A1Q99715 3063 aa10.58□□□□□ -0.71
GGA3-214ENST00000582717 ABCA2Q9BZC7 2435 aa10.58□□□□□ -0.72
GGA3-214ENST00000582717 TMSB15BA0A087X1C1 80 aa10.58□□□□□ -0.72
GGA3-214ENST00000582717 PCP2Q8IVA1 136 aa10.58□□□□□ -0.72
GGA3-214ENST00000582717 ARPC1AQ92747 370 aa10.58□□□□□ -0.72
GGA3-214ENST00000582717 MAP1LC3AQ9H492 121 aa10.58□□□□□ -0.72
GGA3-214ENST00000582717 TMEM238C9JI98 176 aa10.58□□□□□ -0.72
GGA3-214ENST00000582717 SMIM13P0DJ93 91 aa10.58□□□□□ -0.72
GGA3-214ENST00000582717 TMEM11P17152 192 aa10.58□□□□□ -0.72
GGA3-214ENST00000582717 UBE2E1P51965 193 aa10.58□□□□□ -0.72
GGA3-214ENST00000582717 RIPPLY3P57055 190 aa10.58□□□□□ -0.72
GGA3-214ENST00000582717 FLNCQ14315 2725 aa10.57□□□□□ -0.72
GGA3-214ENST00000582717 GNG7O60262 68 aa10.57□□□□□ -0.72
GGA3-214ENST00000582717 IGLC6P0CF74 106 aa10.57□□□□□ -0.72
GGA3-214ENST00000582717 TWIST1Q15672 202 aa10.57□□□□□ -0.72
GGA3-214ENST00000582717 ZNF562Q6V9R5 426 aa10.57□□□□□ -0.72
GGA3-214ENST00000582717 PRR25Q96S07 402 aa10.57□□□□□ -0.72
GGA3-214ENST00000582717 ZMAT4Q9H898 229 aa10.57□□□□□ -0.72
GGA3-214ENST00000582717 NXT2Q9NPJ8 142 aaKnown RBP10.57□□□□□ -0.72
GGA3-214ENST00000582717 S4R3C0 116 aa10.57□□□□□ -0.72
GGA3-214ENST00000582717 SVEP1Q4LDE5 3571 aa10.57□□□□□ -0.72
GGA3-214ENST00000582717 RPL7P18124 248 aaKnown RBP10.56□□□□□ -0.72
GGA3-214ENST00000582717 SAA4P35542 130 aa10.56□□□□□ -0.72
GGA3-214ENST00000582717 RAB37Q96AX2 223 aa10.56□□□□□ -0.72
GGA3-214ENST00000582717 FANCD2OSQ96PS1 177 aa10.56□□□□□ -0.72
GGA3-214ENST00000582717 CNFNQ9BYD5 112 aa10.56□□□□□ -0.72
GGA3-214ENST00000582717 DOPEY1Q5JWR5 2465 aa10.56□□□□□ -0.72
GGA3-214ENST00000582717 NPIPB5A8MRT5 1133 aa10.56□□□□□ -0.72
GGA3-214ENST00000582717 FCER1GP30273 86 aa10.56□□□□□ -0.72
GGA3-214ENST00000582717 MFAP4P55083 255 aa10.56□□□□□ -0.72
GGA3-214ENST00000582717 SAMD5Q5TGI4 173 aa10.56□□□□□ -0.72
GGA3-214ENST00000582717 CCL19Q99731 98 aa10.56□□□□□ -0.72
GGA3-214ENST00000582717 NAA38Q9BRA0 125 aaKnown RBP10.56□□□□□ -0.72
GGA3-214ENST00000582717 DKK2Q9UBU2 259 aa10.56□□□□□ -0.72
GGA3-214ENST00000582717 USP9XQ93008 2570 aaPredicted RBP10.56□□□□□ -0.72
GGA3-214ENST00000582717 USP24Q9UPU5 2620 aa10.55□□□□□ -0.72
GGA3-214ENST00000582717 IGLV11-55A0A075B6I3 123 aa10.55□□□□□ -0.72
GGA3-214ENST00000582717 EGR2P11161 476 aaPredicted RBP10.55□□□□□ -0.72
GGA3-214ENST00000582717 HLA-DRB4P13762 266 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms