RNA–Protein interactions for RNA: ENST00000581625.2

CCDC57-213, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 491 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-213ENST00000581625 RETNQ9HD89 108 aa11.65□□□□□ -0.54
CCDC57-213ENST00000581625 MANBALQ9NQG1 85 aa11.65□□□□□ -0.54
CCDC57-213ENST00000581625 RPH3ALQ9UNE2 315 aa11.65□□□□□ -0.54
CCDC57-213ENST00000581625 AGRNO00468 2067 aa11.64□□□□□ -0.55
CCDC57-213ENST00000581625 M0R2Z0 102 aa11.64□□□□□ -0.55
CCDC57-213ENST00000581625 INSP01308 110 aa11.64□□□□□ -0.55
CCDC57-213ENST00000581625 TCRAP04437 139 aa11.64□□□□□ -0.55
CCDC57-213ENST00000581625 PRB4P10163 310 aaPredicted RBP11.64□□□□□ -0.55
CCDC57-213ENST00000581625 FXYD7P58549 80 aa11.64□□□□□ -0.55
CCDC57-213ENST00000581625 GOLT1AQ6ZVE7 132 aa11.64□□□□□ -0.55
CCDC57-213ENST00000581625 CSNK1G2-AS1Q8NCQ2 148 aa11.64□□□□□ -0.55
CCDC57-213ENST00000581625 IGF2BP2-AS1Q96M15 143 aa11.64□□□□□ -0.55
CCDC57-213ENST00000581625 EPDR1Q9UM22 224 aa11.64□□□□□ -0.55
CCDC57-213ENST00000581625 U3KQK5 164 aa11.64□□□□□ -0.55
CCDC57-213ENST00000581625 FBLL1A6NHQ2 334 aaKnown RBP11.63□□□□□ -0.55
CCDC57-213ENST00000581625 IFNA1P01562 189 aa11.63□□□□□ -0.55
CCDC57-213ENST00000581625 IFNA7P01567 189 aa11.63□□□□□ -0.55
CCDC57-213ENST00000581625 NMBP08949 121 aa11.63□□□□□ -0.55
CCDC57-213ENST00000581625 CT45A10P0DMU9 189 aa11.63□□□□□ -0.55
CCDC57-213ENST00000581625 ZNF138P52744 262 aa11.63□□□□□ -0.55
CCDC57-213ENST00000581625 GNG5P63218 68 aa11.63□□□□□ -0.55
CCDC57-213ENST00000581625 ERCC8Q13216 396 aa11.63□□□□□ -0.55
CCDC57-213ENST00000581625 TEX261Q6UWH6 196 aa11.63□□□□□ -0.55
CCDC57-213ENST00000581625 CYB561D1Q8N8Q1 229 aa11.63□□□□□ -0.55
CCDC57-213ENST00000581625 HIST1H2BAQ96A08 127 aa11.63□□□□□ -0.55
CCDC57-213ENST00000581625 VGLL1Q99990 258 aa11.63□□□□□ -0.55
CCDC57-213ENST00000581625 AGPAT4-IT1Q9H0P7 198 aa11.63□□□□□ -0.55
CCDC57-213ENST00000581625 ZNF492Q9P255 531 aa11.63□□□□□ -0.55
CCDC57-213ENST00000581625 GOLT1BQ9Y3E0 138 aa11.63□□□□□ -0.55
CCDC57-213ENST00000581625 LENEPQ9Y5L5 61 aa11.63□□□□□ -0.55
CCDC57-213ENST00000581625 F6UZH7 168 aa11.62□□□□□ -0.55
CCDC57-213ENST00000581625 PAGE4O60829 102 aa11.62□□□□□ -0.55
CCDC57-213ENST00000581625 CRISP2P16562 243 aa11.62□□□□□ -0.55
CCDC57-213ENST00000581625 PMS2P11Q13670 270 aa11.62□□□□□ -0.55
CCDC57-213ENST00000581625 CST9LP1Q5W188 147 aa11.62□□□□□ -0.55
CCDC57-213ENST00000581625 FAM19A4Q96LR4 140 aa11.62□□□□□ -0.55
CCDC57-213ENST00000581625 RARRES2Q99969 163 aa11.62□□□□□ -0.55
CCDC57-213ENST00000581625 C20orf144Q9BQM9 153 aa11.62□□□□□ -0.55
CCDC57-213ENST00000581625 TXNDC17Q9BRA2 123 aa11.62□□□□□ -0.55
CCDC57-213ENST00000581625 GNG13Q9P2W3 67 aa11.62□□□□□ -0.55
CCDC57-213ENST00000581625 PEX7O00628 323 aa11.61□□□□□ -0.55
CCDC57-213ENST00000581625 CRXO43186 299 aaPredicted RBP11.61□□□□□ -0.55
CCDC57-213ENST00000581625 TAGLN2P37802 199 aaKnown RBP11.61□□□□□ -0.55
CCDC57-213ENST00000581625 ZNF705AQ6ZN79 300 aaPredicted RBP11.61□□□□□ -0.55
CCDC57-213ENST00000581625 CCDC28AQ8IWP9 274 aa11.61□□□□□ -0.55
CCDC57-213ENST00000581625 TMEM256Q8N2U0 113 aa11.61□□□□□ -0.55
CCDC57-213ENST00000581625 TMEM75Q8N9X5 138 aa11.61□□□□□ -0.55
CCDC57-213ENST00000581625 OR11H2Q8NH07 326 aa11.61□□□□□ -0.55
CCDC57-213ENST00000581625 HUWE1Q7Z6Z7 4374 aaKnown RBP11.61□□□□□ -0.55
CCDC57-213ENST00000581625 TRAV12-2A0A075B6T6 113 aa11.6□□□□□ -0.55
CCDC57-213ENST00000581625 KLLNB2CW77 178 aa11.6□□□□□ -0.55
CCDC57-213ENST00000581625 ATP5G3P48201 142 aa11.6□□□□□ -0.55
CCDC57-213ENST00000581625 Q8TAT8 98 aa11.6□□□□□ -0.55
CCDC57-213ENST00000581625 NDFIP1Q9BT67 221 aa11.6□□□□□ -0.55
CCDC57-213ENST00000581625 C11orf94C9JXX5 98 aa11.59□□□□□ -0.55
CCDC57-213ENST00000581625 MIFP14174 115 aa11.59□□□□□ -0.55
CCDC57-213ENST00000581625 CCL20P78556 96 aa11.59□□□□□ -0.55
CCDC57-213ENST00000581625 GFI1BQ5VTD9 330 aa11.59□□□□□ -0.55
CCDC57-213ENST00000581625 ZNF680Q8NEM1 530 aa11.59□□□□□ -0.55
CCDC57-213ENST00000581625 LYPD6BQ8NI32 183 aa11.59□□□□□ -0.55
CCDC57-213ENST00000581625 NEU1Q99519 415 aa11.59□□□□□ -0.55
CCDC57-213ENST00000581625 TMEM208Q9BTX3 173 aa11.59□□□□□ -0.55
CCDC57-213ENST00000581625 COL7A1Q02388 2944 aa11.58□□□□□ -0.56
CCDC57-213ENST00000581625 TRAV8-1A0A0A6YYK1 113 aa11.58□□□□□ -0.56
CCDC57-213ENST00000581625 C7orf71A4D174 169 aa11.58□□□□□ -0.56
CCDC57-213ENST00000581625 SMIM9A6NGZ8 99 aa11.58□□□□□ -0.56
CCDC57-213ENST00000581625 BCL2P10415 239 aa11.58□□□□□ -0.56
CCDC57-213ENST00000581625 FLI1Q01543 452 aaPredicted RBP11.58□□□□□ -0.56
CCDC57-213ENST00000581625 C1orf158Q8N1D5 194 aa11.58□□□□□ -0.56
CCDC57-213ENST00000581625 ZFAND2AQ8N6M9 145 aa11.58□□□□□ -0.56
CCDC57-213ENST00000581625 C11orf68Q9H3H3 251 aaKnown RBP11.58□□□□□ -0.56
CCDC57-213ENST00000581625 X6R8D5 127 aa11.58□□□□□ -0.56
CCDC57-213ENST00000581625 GPX1P07203 203 aa11.57□□□□□ -0.56
CCDC57-213ENST00000581625 MEF2BQ02080 365 aaPredicted RBP11.57□□□□□ -0.56
CCDC57-213ENST00000581625 FMC1Q96HJ9 113 aa11.57□□□□□ -0.56
CCDC57-213ENST00000581625 NIPSNAP3BQ9BS92 247 aa11.57□□□□□ -0.56
CCDC57-213ENST00000581625 IGHV3OR16-12A0A075B7B8 117 aa11.56□□□□□ -0.56
CCDC57-213ENST00000581625 H7BYZ3 331 aa11.56□□□□□ -0.56
CCDC57-213ENST00000581625 J3KRW8 73 aa11.56□□□□□ -0.56
CCDC57-213ENST00000581625 AKR1C3P42330 323 aa11.56□□□□□ -0.56
CCDC57-213ENST00000581625 UBE2G1P62253 170 aa11.56□□□□□ -0.56
CCDC57-213ENST00000581625 SAPCD1Q5SSQ6 148 aa11.56□□□□□ -0.56
CCDC57-213ENST00000581625 Q8NAQ8 132 aa11.56□□□□□ -0.56
CCDC57-213ENST00000581625 VAX2Q9UIW0 290 aa11.56□□□□□ -0.56
CCDC57-213ENST00000581625 PSG8Q9UQ74 426 aa11.56□□□□□ -0.56
CCDC57-213ENST00000581625 PDE6DO43924 150 aa11.55□□□□□ -0.56
CCDC57-213ENST00000581625 IGLV2-11P01706 119 aa11.55□□□□□ -0.56
CCDC57-213ENST00000581625 S100A9P06702 114 aaKnown RBP11.55□□□□□ -0.56
CCDC57-213ENST00000581625 RBMY1A1P0DJD3 496 aaKnown RBP11.55□□□□□ -0.56
CCDC57-213ENST00000581625 RBMY1CP0DJD4 496 aa11.55□□□□□ -0.56
CCDC57-213ENST00000581625 BTN1A1Q13410 526 aa11.55□□□□□ -0.56
CCDC57-213ENST00000581625 KIR3DS1Q14943 382 aa11.55□□□□□ -0.56
CCDC57-213ENST00000581625 RBMY1FQ15415 496 aaKnown RBP11.55□□□□□ -0.56
CCDC57-213ENST00000581625 Q86TA4 180 aa11.55□□□□□ -0.56
CCDC57-213ENST00000581625 C11orf52Q96A22 123 aa11.55□□□□□ -0.56
CCDC57-213ENST00000581625 PYGO2Q9BRQ0 406 aa11.55□□□□□ -0.56
CCDC57-213ENST00000581625 TREM1Q9NP99 234 aa11.55□□□□□ -0.56
CCDC57-213ENST00000581625 KLF12Q9Y4X4 402 aa11.55□□□□□ -0.56
CCDC57-213ENST00000581625 TRAV12-3A0A0B4J271 114 aa11.54□□□□□ -0.56
CCDC57-213ENST00000581625 IGHV4-28A0A0C4DH34 117 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms