RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 C9orf139Q6ZV77 190 aa7.17□□□□□ -1.26
CDK5RAP3-208ENST00000578525 IL17RELQ6ZVW7 336 aa7.17□□□□□ -1.26
CDK5RAP3-208ENST00000578525 ORMDL3Q8N138 153 aa7.17□□□□□ -1.26
CDK5RAP3-208ENST00000578525 OR10AG1Q8NH19 301 aa7.17□□□□□ -1.26
CDK5RAP3-208ENST00000578525 USMG5Q96IX5 58 aa7.17□□□□□ -1.26
CDK5RAP3-208ENST00000578525 AGPAT4-IT1Q9H0P7 198 aa7.17□□□□□ -1.26
CDK5RAP3-208ENST00000578525 AP5S1Q9NUS5 200 aa7.17□□□□□ -1.26
CDK5RAP3-208ENST00000578525 PPP1R14DQ9NXH3 145 aa7.17□□□□□ -1.26
CDK5RAP3-208ENST00000578525 LINC00527Q9UJ94 153 aa7.17□□□□□ -1.26
CDK5RAP3-208ENST00000578525 BOD1L1Q8NFC6 3051 aa7.16□□□□□ -1.26
CDK5RAP3-208ENST00000578525 IGLL1P15814 213 aa7.16□□□□□ -1.26
CDK5RAP3-208ENST00000578525 PPIFP30405 207 aaKnown RBP7.16□□□□□ -1.26
CDK5RAP3-208ENST00000578525 TWIST1Q15672 202 aa7.16□□□□□ -1.26
CDK5RAP3-208ENST00000578525 C9orf47Q6ZRZ4 202 aa7.16□□□□□ -1.26
CDK5RAP3-208ENST00000578525 C16orf92Q96LL3 132 aa7.16□□□□□ -1.26
CDK5RAP3-208ENST00000578525 CNFNQ9BYD5 112 aa7.16□□□□□ -1.26
CDK5RAP3-208ENST00000578525 ST20Q9HBF5 79 aa7.16□□□□□ -1.26
CDK5RAP3-208ENST00000578525 SIGLEC8Q9NYZ4 499 aa7.16□□□□□ -1.26
CDK5RAP3-208ENST00000578525 MRPS16Q9Y3D3 137 aaKnown RBP7.16□□□□□ -1.26
CDK5RAP3-208ENST00000578525 IGF2RP11717 2491 aa7.16□□□□□ -1.26
CDK5RAP3-208ENST00000578525 B4DSR2 109 aa7.15□□□□□ -1.26
CDK5RAP3-208ENST00000578525 SLC25A16P16260 332 aa7.15□□□□□ -1.26
CDK5RAP3-208ENST00000578525 GATA3P23771 443 aa7.15□□□□□ -1.26
CDK5RAP3-208ENST00000578525 IFI27P40305 119 aaPredicted RBP7.15□□□□□ -1.26
CDK5RAP3-208ENST00000578525 BATFQ16520 125 aa7.15□□□□□ -1.26
CDK5RAP3-208ENST00000578525 LINC01545Q5VT33 79 aa7.15□□□□□ -1.26
CDK5RAP3-208ENST00000578525 ZNF575Q86XF7 245 aa7.15□□□□□ -1.26
CDK5RAP3-208ENST00000578525 ZNF747Q9BV97 191 aa7.15□□□□□ -1.26
CDK5RAP3-208ENST00000578525 ZNF580Q9UK33 172 aa7.15□□□□□ -1.26
CDK5RAP3-208ENST00000578525 LENEPQ9Y5L5 61 aa7.15□□□□□ -1.26
CDK5RAP3-208ENST00000578525 MUC21A0A0G2JKD1 596 aa7.14□□□□□ -1.27
CDK5RAP3-208ENST00000578525 MUC21A0A140T8X8 626 aa7.14□□□□□ -1.27
CDK5RAP3-208ENST00000578525 HSBP1L1C9JCN9 74 aa7.14□□□□□ -1.27
CDK5RAP3-208ENST00000578525 NPYP01303 97 aa7.14□□□□□ -1.27
CDK5RAP3-208ENST00000578525 TRBV12-3P01733 135 aa7.14□□□□□ -1.27
CDK5RAP3-208ENST00000578525 PPBPP02775 128 aa7.14□□□□□ -1.27
CDK5RAP3-208ENST00000578525 PF4V1P10720 104 aa7.14□□□□□ -1.27
CDK5RAP3-208ENST00000578525 TSPOP30536 169 aa7.14□□□□□ -1.27
CDK5RAP3-208ENST00000578525 CKS2P33552 79 aa7.14□□□□□ -1.27
CDK5RAP3-208ENST00000578525 MUC21Q5SSG8 566 aa7.14□□□□□ -1.27
CDK5RAP3-208ENST00000578525 COL5A1-AS1Q5SY13 56 aa7.14□□□□□ -1.27
CDK5RAP3-208ENST00000578525 ZNF738Q8NE65 137 aa7.14□□□□□ -1.27
CDK5RAP3-208ENST00000578525 RNF185Q96GF1 192 aa7.14□□□□□ -1.27
CDK5RAP3-208ENST00000578525 MS4A6AQ9H2W1 248 aa7.14□□□□□ -1.27
CDK5RAP3-208ENST00000578525 LAMTOR2Q9Y2Q5 125 aa7.14□□□□□ -1.27
CDK5RAP3-208ENST00000578525 ATMQ13315 3056 aa7.14□□□□□ -1.27
CDK5RAP3-208ENST00000578525 NBEAQ8NFP9 2946 aa7.14□□□□□ -1.27
CDK5RAP3-208ENST00000578525 CEP295Q9C0D2 2601 aa7.14□□□□□ -1.27
CDK5RAP3-208ENST00000578525 A0A096LNJ9 63 aa7.13□□□□□ -1.27
CDK5RAP3-208ENST00000578525 IGKV3D-20A0A0C4DH25 116 aa7.13□□□□□ -1.27
CDK5RAP3-208ENST00000578525 A0A0G2JLM5 398 aa7.13□□□□□ -1.27
CDK5RAP3-208ENST00000578525 LOC389332A0A1B0GUA5 103 aa7.13□□□□□ -1.27
CDK5RAP3-208ENST00000578525 SMKR1H3BMG3 65 aa7.13□□□□□ -1.27
CDK5RAP3-208ENST00000578525 SOCS3O14543 225 aa7.13□□□□□ -1.27
CDK5RAP3-208ENST00000578525 OVOL1O14753 267 aa7.13□□□□□ -1.27
CDK5RAP3-208ENST00000578525 SMAD7O15105 426 aaKnown RBP7.13□□□□□ -1.27
CDK5RAP3-208ENST00000578525 IGLV1-40P01703 118 aa7.13□□□□□ -1.27
CDK5RAP3-208ENST00000578525 CACNG7P62955 275 aa7.13□□□□□ -1.27
CDK5RAP3-208ENST00000578525 CFHR3Q02985 330 aa7.13□□□□□ -1.27
CDK5RAP3-208ENST00000578525 UNQ9165/PRO28630Q6UXU0 137 aa7.13□□□□□ -1.27
CDK5RAP3-208ENST00000578525 OR4X2Q8NGF9 303 aa7.13□□□□□ -1.27
CDK5RAP3-208ENST00000578525 C20orf173Q96LM9 149 aa7.13□□□□□ -1.27
CDK5RAP3-208ENST00000578525 LINC00477Q96M19 166 aa7.13□□□□□ -1.27
CDK5RAP3-208ENST00000578525 NPFFR1Q9GZQ6 430 aa7.13□□□□□ -1.27
CDK5RAP3-208ENST00000578525 MAP1LC3AQ9H492 121 aa7.13□□□□□ -1.27
CDK5RAP3-208ENST00000578525 C11orf21Q9P2W6 132 aa7.13□□□□□ -1.27
CDK5RAP3-208ENST00000578525 TIMM8BQ9Y5J9 83 aaPredicted RBP7.13□□□□□ -1.27
CDK5RAP3-208ENST00000578525 IGHV7-4-1A0A0J9YVY3 117 aa7.12□□□□□ -1.27
CDK5RAP3-208ENST00000578525 hDV102S1A0JD36 115 aa7.12□□□□□ -1.27
CDK5RAP3-208ENST00000578525 LINC01546A6NGU7 62 aa7.12□□□□□ -1.27
CDK5RAP3-208ENST00000578525 NCR2O95944 276 aa7.12□□□□□ -1.27
CDK5RAP3-208ENST00000578525 AVPP01185 164 aa7.12□□□□□ -1.27
CDK5RAP3-208ENST00000578525 IGHV3-11P01762 117 aa7.12□□□□□ -1.27
CDK5RAP3-208ENST00000578525 HBDP02042 147 aa7.12□□□□□ -1.27
CDK5RAP3-208ENST00000578525 LOXL1Q08397 574 aaPredicted RBP7.12□□□□□ -1.27
CDK5RAP3-208ENST00000578525 FAM106AQ4KMX7 169 aa7.12□□□□□ -1.27
CDK5RAP3-208ENST00000578525 GPHB5Q86YW7 130 aa7.12□□□□□ -1.27
CDK5RAP3-208ENST00000578525 LINC01356Q8N9X3 169 aa7.12□□□□□ -1.27
CDK5RAP3-208ENST00000578525 KLK15Q9H2R5 256 aa7.12□□□□□ -1.27
CDK5RAP3-208ENST00000578525 MSRB1Q9NZV6 116 aa7.12□□□□□ -1.27
CDK5RAP3-208ENST00000578525 COL6A6A6NMZ7 2263 aa7.12□□□□□ -1.27
CDK5RAP3-208ENST00000578525 DMXL2Q8TDJ6 3036 aa7.11□□□□□ -1.27
CDK5RAP3-208ENST00000578525 ASPMQ8IZT6 3477 aa7.11□□□□□ -1.27
CDK5RAP3-208ENST00000578525 HIVEP3Q5T1R4 2406 aa7.11□□□□□ -1.27
CDK5RAP3-208ENST00000578525 IGHV4-4A0A075B6R2 117 aa7.11□□□□□ -1.27
CDK5RAP3-208ENST00000578525 H0Y8G0 127 aa7.11□□□□□ -1.27
CDK5RAP3-208ENST00000578525 J3QLI3 93 aa7.11□□□□□ -1.27
CDK5RAP3-208ENST00000578525 SNAI2O43623 268 aa7.11□□□□□ -1.27
CDK5RAP3-208ENST00000578525 TCF21O43680 179 aa7.11□□□□□ -1.27
CDK5RAP3-208ENST00000578525 ZNF25P17030 456 aaPredicted RBP7.11□□□□□ -1.27
CDK5RAP3-208ENST00000578525 BLCAPP62952 87 aa7.11□□□□□ -1.27
CDK5RAP3-208ENST00000578525 FOXE3Q13461 319 aa7.11□□□□□ -1.27
CDK5RAP3-208ENST00000578525 LGALS9BQ3B8N2 356 aa7.11□□□□□ -1.27
CDK5RAP3-208ENST00000578525 LGALS9CQ6DKI2 356 aa7.11□□□□□ -1.27
CDK5RAP3-208ENST00000578525 Q6ZS46 218 aa7.11□□□□□ -1.27
CDK5RAP3-208ENST00000578525 SMIM15Q7Z3B0 74 aa7.11□□□□□ -1.27
CDK5RAP3-208ENST00000578525 OR10J6PQ8NGY7 276 aa7.11□□□□□ -1.27
CDK5RAP3-208ENST00000578525 SCRT2Q9NQ03 307 aa7.11□□□□□ -1.27
CDK5RAP3-208ENST00000578525 SPTA1P02549 2419 aa7.1□□□□□ -1.27
CDK5RAP3-208ENST00000578525 TPRP12270 2363 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms