RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 ARPC1AQ92747 370 aa11.55□□□□□ -0.56
CUEDC1-206ENST00000577830 DKK2Q9UBU2 259 aa11.55□□□□□ -0.56
CUEDC1-206ENST00000577830 CSPG4Q6UVK1 2322 aa11.55□□□□□ -0.56
CUEDC1-206ENST00000577830 FER1L6-AS1Q8NA97 138 aa11.54□□□□□ -0.56
CUEDC1-206ENST00000577830 TIMD4Q96H15 378 aa11.54□□□□□ -0.56
CUEDC1-206ENST00000577830 KLK15Q9H2R5 256 aa11.54□□□□□ -0.56
CUEDC1-206ENST00000577830 TNFRSF13BO14836 293 aaPredicted RBP11.54□□□□□ -0.56
CUEDC1-206ENST00000577830 ZNF80P51504 273 aaPredicted RBP11.54□□□□□ -0.56
CUEDC1-206ENST00000577830 HIST1H1AQ02539 215 aaPredicted RBP11.54□□□□□ -0.56
CUEDC1-206ENST00000577830 TMEM97Q5BJF2 176 aa11.54□□□□□ -0.56
CUEDC1-206ENST00000577830 RABAC1Q9UI14 185 aa11.54□□□□□ -0.56
CUEDC1-206ENST00000577830 GCSHP23434 173 aa11.54□□□□□ -0.56
CUEDC1-206ENST00000577830 RBX1P62877 108 aa11.54□□□□□ -0.56
CUEDC1-206ENST00000577830 FAM231BA6NCW3 169 aa11.53□□□□□ -0.56
CUEDC1-206ENST00000577830 K7EP13 123 aa11.53□□□□□ -0.56
CUEDC1-206ENST00000577830 RIPPLY3P57055 190 aa11.53□□□□□ -0.56
CUEDC1-206ENST00000577830 SMIM12Q96EX1 92 aa11.53□□□□□ -0.56
CUEDC1-206ENST00000577830 C5orf64Q2M2E5 130 aa11.53□□□□□ -0.56
CUEDC1-206ENST00000577830 CST9LQ9H4G1 147 aa11.53□□□□□ -0.56
CUEDC1-206ENST00000577830 CUBNO60494 3623 aa11.53□□□□□ -0.56
CUEDC1-206ENST00000577830 CEACAM3P40198 252 aa11.53□□□□□ -0.56
CUEDC1-206ENST00000577830 PLP1P60201 277 aa11.53□□□□□ -0.56
CUEDC1-206ENST00000577830 PVRIGQ6DKI7 326 aa11.53□□□□□ -0.56
CUEDC1-206ENST00000577830 IFI27L1Q96BM0 104 aa11.53□□□□□ -0.56
CUEDC1-206ENST00000577830 TMEM14CQ9P0S9 112 aa11.53□□□□□ -0.56
CUEDC1-206ENST00000577830 TRAV30A0A087WSZ9 112 aa11.52□□□□□ -0.56
CUEDC1-206ENST00000577830 SCGB2A2Q13296 93 aa11.52□□□□□ -0.56
CUEDC1-206ENST00000577830 DYNAPQ8N1N2 210 aa11.52□□□□□ -0.56
CUEDC1-206ENST00000577830 HIF1ANQ9NWT6 349 aa11.52□□□□□ -0.56
CUEDC1-206ENST00000577830 GAGE12BA1L429 117 aa11.52□□□□□ -0.57
CUEDC1-206ENST00000577830 PRAC2D3DTV9 90 aa11.52□□□□□ -0.57
CUEDC1-206ENST00000577830 NPIPB6E9PJ23 425 aa11.52□□□□□ -0.57
CUEDC1-206ENST00000577830 FAM104BQ5XKR9 115 aa11.52□□□□□ -0.57
CUEDC1-206ENST00000577830 DEFB125Q8N687 156 aa11.52□□□□□ -0.57
CUEDC1-206ENST00000577830 K7ENP7 123 aa11.52□□□□□ -0.57
CUEDC1-206ENST00000577830 LEPP41159 167 aa11.52□□□□□ -0.57
CUEDC1-206ENST00000577830 RPL11P62913 178 aaKnown RBP11.52□□□□□ -0.57
CUEDC1-206ENST00000577830 LINC01545Q5VT33 79 aa11.52□□□□□ -0.57
CUEDC1-206ENST00000577830 TRAV26-2A0A0B4J265 109 aa11.51□□□□□ -0.57
CUEDC1-206ENST00000577830 CDSNQ15517 529 aa11.51□□□□□ -0.57
CUEDC1-206ENST00000577830 SAP30O75446 220 aa11.51□□□□□ -0.57
CUEDC1-206ENST00000577830 COX8AP10176 69 aa11.51□□□□□ -0.57
CUEDC1-206ENST00000577830 CLEC19AQ6UXS0 136 aa11.51□□□□□ -0.57
CUEDC1-206ENST00000577830 CELSR1Q9NYQ6 3014 aa11.51□□□□□ -0.57
CUEDC1-206ENST00000577830 A1L4Q6 167 aa11.5□□□□□ -0.57
CUEDC1-206ENST00000577830 CRXO43186 299 aaPredicted RBP11.5□□□□□ -0.57
CUEDC1-206ENST00000577830 HBDP02042 147 aa11.5□□□□□ -0.57
CUEDC1-206ENST00000577830 RPL7P18124 248 aaKnown RBP11.5□□□□□ -0.57
CUEDC1-206ENST00000577830 C8orf31Q8N9H6 132 aa11.5□□□□□ -0.57
CUEDC1-206ENST00000577830 FANCD2OSQ96PS1 177 aa11.5□□□□□ -0.57
CUEDC1-206ENST00000577830 PRR25Q96S07 402 aa11.5□□□□□ -0.57
CUEDC1-206ENST00000577830 RAB1BQ9H0U4 201 aa11.5□□□□□ -0.57
CUEDC1-206ENST00000577830 TMEM160Q9NX00 188 aa11.5□□□□□ -0.57
CUEDC1-206ENST00000577830 SORL1Q92673 2214 aa11.5□□□□□ -0.57
CUEDC1-206ENST00000577830 G3V318 75 aa11.5□□□□□ -0.57
CUEDC1-206ENST00000577830 GTSCR1Q86UQ5 136 aa11.5□□□□□ -0.57
CUEDC1-206ENST00000577830 PEF1Q9UBV8 284 aaKnown RBP11.5□□□□□ -0.57
CUEDC1-206ENST00000577830 C15orf32Q32M92 178 aa11.49□□□□□ -0.57
CUEDC1-206ENST00000577830 Q6ZQT7 251 aa11.49□□□□□ -0.57
CUEDC1-206ENST00000577830 PIMREGQ9BSJ6 248 aa11.49□□□□□ -0.57
CUEDC1-206ENST00000577830 IL17RELQ6ZVW7 336 aa11.49□□□□□ -0.57
CUEDC1-206ENST00000577830 VMO1Q7Z5L0 202 aa11.49□□□□□ -0.57
CUEDC1-206ENST00000577830 FOXC2Q99958 501 aa11.49□□□□□ -0.57
CUEDC1-206ENST00000577830 MS4A6AQ9H2W1 248 aa11.49□□□□□ -0.57
CUEDC1-206ENST00000577830 OCIAD2Q56VL3 154 aa11.49□□□□□ -0.57
CUEDC1-206ENST00000577830 C2orf91Q6ZV80 131 aa11.49□□□□□ -0.57
CUEDC1-206ENST00000577830 RPL24P83731 157 aaKnown RBP11.48□□□□□ -0.57
CUEDC1-206ENST00000577830 KIR3DS1Q14943 382 aa11.48□□□□□ -0.57
CUEDC1-206ENST00000577830 CD5LO43866 347 aa11.48□□□□□ -0.57
CUEDC1-206ENST00000577830 HIVEP3Q5T1R4 2406 aa11.48□□□□□ -0.57
CUEDC1-206ENST00000577830 A0A096LNJ9 63 aa11.48□□□□□ -0.57
CUEDC1-206ENST00000577830 DEFB1P60022 68 aa11.48□□□□□ -0.57
CUEDC1-206ENST00000577830 TMEM219Q86XT9 240 aa11.48□□□□□ -0.57
CUEDC1-206ENST00000577830 MEGF9Q9H1U4 602 aa11.48□□□□□ -0.57
CUEDC1-206ENST00000577830 MAP1LC3AQ9H492 121 aa11.48□□□□□ -0.57
CUEDC1-206ENST00000577830 K7ERJ3 54 aa11.47□□□□□ -0.57
CUEDC1-206ENST00000577830 CACNA1AO00555 2505 aa11.46□□□□□ -0.57
CUEDC1-206ENST00000577830 A6NDN8 102 aa11.46□□□□□ -0.58
CUEDC1-206ENST00000577830 LINC01548A6NM66 108 aa11.46□□□□□ -0.58
CUEDC1-206ENST00000577830 LY6DQ14210 128 aa11.46□□□□□ -0.58
CUEDC1-206ENST00000577830 LCNL1Q6ZST4 164 aa11.46□□□□□ -0.58
CUEDC1-206ENST00000577830 CTSGP08311 255 aa11.46□□□□□ -0.58
CUEDC1-206ENST00000577830 GLMPQ8WWB7 406 aa11.46□□□□□ -0.58
CUEDC1-206ENST00000577830 SPANXN1Q5VSR9 72 aa11.45□□□□□ -0.58
CUEDC1-206ENST00000577830 Q6AWC8 147 aa11.45□□□□□ -0.58
CUEDC1-206ENST00000577830 ZNF562Q6V9R5 426 aa11.45□□□□□ -0.58
CUEDC1-206ENST00000577830 MTURNQ8N3F0 131 aa11.45□□□□□ -0.58
CUEDC1-206ENST00000577830 TMEM158Q8WZ71 300 aa11.45□□□□□ -0.58
CUEDC1-206ENST00000577830 UBTD1Q9HAC8 227 aa11.45□□□□□ -0.58
CUEDC1-206ENST00000577830 IGLV11-55A0A075B6I3 123 aa11.45□□□□□ -0.58
CUEDC1-206ENST00000577830 A0A0G2JLM5 398 aa11.45□□□□□ -0.58
CUEDC1-206ENST00000577830 WI2-2373I1.2A0A1W2PRP0 233 aa11.45□□□□□ -0.58
CUEDC1-206ENST00000577830 FABP5P3A8MUU1 101 aa11.45□□□□□ -0.58
CUEDC1-206ENST00000577830 K7ERU9 68 aa11.45□□□□□ -0.58
CUEDC1-206ENST00000577830 M0R381 172 aa11.44□□□□□ -0.58
CUEDC1-206ENST00000577830 SMAD7O15105 426 aaKnown RBP11.44□□□□□ -0.58
CUEDC1-206ENST00000577830 NDUFA3O95167 84 aa11.44□□□□□ -0.58
CUEDC1-206ENST00000577830 TRGV3P03979 118 aa11.44□□□□□ -0.58
CUEDC1-206ENST00000577830 LYPD1Q8N2G4 141 aa11.44□□□□□ -0.58
CUEDC1-206ENST00000577830 VKORC1Q9BQB6 163 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms