RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 IGLV2-18A0A075B6J9 118 aa12.17□□□□□ -0.46
SMG6-214ENST00000573827 J3KRW8 73 aa12.17□□□□□ -0.46
SMG6-214ENST00000573827 SLC25A5P05141 298 aaKnown RBP12.17□□□□□ -0.46
SMG6-214ENST00000573827 NBEAP1P0C6P0 100 aa12.17□□□□□ -0.46
SMG6-214ENST00000573827 DEFA1P59665 94 aa12.17□□□□□ -0.46
SMG6-214ENST00000573827 DEFA3P59666 94 aa12.17□□□□□ -0.46
SMG6-214ENST00000573827 CD300CQ08708 224 aa12.17□□□□□ -0.46
SMG6-214ENST00000573827 PRR9Q5T870 116 aa12.17□□□□□ -0.46
SMG6-214ENST00000573827 UBE2DNLQ8IWF7 75 aa12.17□□□□□ -0.46
SMG6-214ENST00000573827 ZFAND2AQ8N6M9 145 aa12.17□□□□□ -0.46
SMG6-214ENST00000573827 C11orf72Q8NBR9 251 aa12.17□□□□□ -0.46
SMG6-214ENST00000573827 RNF141Q8WVD5 230 aa12.17□□□□□ -0.46
SMG6-214ENST00000573827 PHYHIPLQ96FC7 376 aa12.17□□□□□ -0.46
SMG6-214ENST00000573827 LINC00477Q96M19 166 aa12.17□□□□□ -0.46
SMG6-214ENST00000573827 VGLL1Q99990 258 aa12.17□□□□□ -0.46
SMG6-214ENST00000573827 PYGO2Q9BRQ0 406 aa12.17□□□□□ -0.46
SMG6-214ENST00000573827 LINC00467Q9BRT7 94 aa12.17□□□□□ -0.46
SMG6-214ENST00000573827 MRPL32Q9BYC8 188 aaKnown RBP12.17□□□□□ -0.46
SMG6-214ENST00000573827 WFDC1Q9HC57 220 aa12.17□□□□□ -0.46
SMG6-214ENST00000573827 TIMM9Q9Y5J7 89 aa12.17□□□□□ -0.46
SMG6-214ENST00000573827 MUC4Q99102 2169 aa12.17□□□□□ -0.46
SMG6-214ENST00000573827 IGKV2-40A0A087WW87 121 aaPredicted RBP12.16□□□□□ -0.46
SMG6-214ENST00000573827 C7orf71A4D174 169 aa12.16□□□□□ -0.46
SMG6-214ENST00000573827 SSNA1O43805 119 aa12.16□□□□□ -0.46
SMG6-214ENST00000573827 IGKV2D-40P01614 121 aaPredicted RBP12.16□□□□□ -0.46
SMG6-214ENST00000573827 HOXA5P20719 270 aa12.16□□□□□ -0.46
SMG6-214ENST00000573827 DAZ2Q13117 558 aaKnown RBP12.16□□□□□ -0.46
SMG6-214ENST00000573827 BTN1A1Q13410 526 aa12.16□□□□□ -0.46
SMG6-214ENST00000573827 ICAM4Q14773 271 aa12.16□□□□□ -0.46
SMG6-214ENST00000573827 OR51M1Q9H341 326 aa12.16□□□□□ -0.46
SMG6-214ENST00000573827 KCNIP2Q9NS61 270 aa12.16□□□□□ -0.46
SMG6-214ENST00000573827 MBD2Q9UBB5 411 aa12.16□□□□□ -0.46
SMG6-214ENST00000573827 ABCA13Q86UQ4 5058 aa12.15□□□□□ -0.46
SMG6-214ENST00000573827 NMBP08949 121 aa12.15□□□□□ -0.46
SMG6-214ENST00000573827 OR10J4P0C629 311 aa12.15□□□□□ -0.46
SMG6-214ENST00000573827 RPL12P30050 165 aaKnown RBP12.15□□□□□ -0.46
SMG6-214ENST00000573827 FAM3BP58499 235 aaPredicted RBP12.15□□□□□ -0.46
SMG6-214ENST00000573827 Q6ZQT7 251 aa12.15□□□□□ -0.46
SMG6-214ENST00000573827 ZNRF2Q8NHG8 242 aa12.15□□□□□ -0.46
SMG6-214ENST00000573827 PAXXQ9BUH6 204 aa12.15□□□□□ -0.46
SMG6-214ENST00000573827 BATF3Q9NR55 127 aa12.15□□□□□ -0.46
SMG6-214ENST00000573827 APOBP04114 4563 aaKnown RBP12.15□□□□□ -0.47
SMG6-214ENST00000573827 FAM122CQ6P4D5 195 aa12.14□□□□□ -0.47
SMG6-214ENST00000573827 CCDC28AQ8IWP9 274 aa12.14□□□□□ -0.47
SMG6-214ENST00000573827 ANXA2RQ3ZCQ2 193 aa12.13□□□□□ -0.47
SMG6-214ENST00000573827 Q6ZTI0 123 aa12.13□□□□□ -0.47
SMG6-214ENST00000573827 SMIM3Q9BZL3 60 aa12.13□□□□□ -0.47
SMG6-214ENST00000573827 AAMDCQ9H7C9 122 aa12.13□□□□□ -0.47
SMG6-214ENST00000573827 ZNF492Q9P255 531 aa12.13□□□□□ -0.47
SMG6-214ENST00000573827 LINC00588Q9Y4M8 146 aa12.13□□□□□ -0.47
SMG6-214ENST00000573827 ALG5Q9Y673 324 aa12.13□□□□□ -0.47
SMG6-214ENST00000573827 GAGE12BA1L429 117 aa12.12□□□□□ -0.47
SMG6-214ENST00000573827 PRSS29PA6NIE9 313 aa12.12□□□□□ -0.47
SMG6-214ENST00000573827 C17orf112F2Z3M2 114 aa12.12□□□□□ -0.47
SMG6-214ENST00000573827 EIF3GO75821 320 aaKnown RBP eCLIP12.12□□□□□ -0.47
SMG6-214ENST00000573827 GAGE7O76087 117 aa12.12□□□□□ -0.47
SMG6-214ENST00000573827 NUDT3O95989 172 aa12.12□□□□□ -0.47
SMG6-214ENST00000573827 GAGE12FP0CL80 117 aa12.12□□□□□ -0.47
SMG6-214ENST00000573827 GAGE12GP0CL81 117 aa12.12□□□□□ -0.47
SMG6-214ENST00000573827 GAGE12IP0CL82 117 aa12.12□□□□□ -0.47
SMG6-214ENST00000573827 PET100P0DJ07 73 aa12.12□□□□□ -0.47
SMG6-214ENST00000573827 FFAR4Q5NUL3 377 aa12.12□□□□□ -0.47
SMG6-214ENST00000573827 C18orf15Q96N68 181 aa12.12□□□□□ -0.47
SMG6-214ENST00000573827 GSN-AS1Q9NRJ2 163 aa12.12□□□□□ -0.47
SMG6-214ENST00000573827 TRAV26-1A0A087WT03 109 aa12.11□□□□□ -0.47
SMG6-214ENST00000573827 TRBV7-9A0A0J9YWB2 115 aa12.11□□□□□ -0.47
SMG6-214ENST00000573827 RNASE4P34096 147 aaKnown RBP12.11□□□□□ -0.47
SMG6-214ENST00000573827 TMPRSS5Q9H3S3 457 aa12.11□□□□□ -0.47
SMG6-214ENST00000573827 SNURFLB1AK76 121 aa12.1□□□□□ -0.47
SMG6-214ENST00000573827 OR7C2O60412 319 aa12.1□□□□□ -0.47
SMG6-214ENST00000573827 LYPD1Q8N2G4 141 aa12.1□□□□□ -0.47
SMG6-214ENST00000573827 EIF4E3Q8N5X7 224 aaKnown RBP12.1□□□□□ -0.47
SMG6-214ENST00000573827 ZNF680Q8NEM1 530 aa12.1□□□□□ -0.47
SMG6-214ENST00000573827 Q8TAT8 98 aa12.1□□□□□ -0.47
SMG6-214ENST00000573827 RXFP4Q8TDU9 374 aa12.1□□□□□ -0.47
SMG6-214ENST00000573827 Q9H3A6 140 aa12.1□□□□□ -0.47
SMG6-214ENST00000573827 TP53TG3Q9ULZ0 132 aa12.1□□□□□ -0.47
SMG6-214ENST00000573827 RBAKDNA6NC62 111 aa12.09□□□□□ -0.47
SMG6-214ENST00000573827 SPINK4O60575 86 aa12.09□□□□□ -0.47
SMG6-214ENST00000573827 M6PRP20645 277 aa12.09□□□□□ -0.47
SMG6-214ENST00000573827 ZNF138P52744 262 aa12.09□□□□□ -0.47
SMG6-214ENST00000573827 TCL1AP56279 114 aa12.09□□□□□ -0.47
SMG6-214ENST00000573827 RANP62826 216 aaKnown RBP12.09□□□□□ -0.47
SMG6-214ENST00000573827 UBE2L3P68036 154 aaKnown RBP12.09□□□□□ -0.47
SMG6-214ENST00000573827 TMEM78Q5T7P6 136 aa12.09□□□□□ -0.47
SMG6-214ENST00000573827 VSIG2Q96IQ7 327 aa12.09□□□□□ -0.47
SMG6-214ENST00000573827 KLF12Q9Y4X4 402 aa12.09□□□□□ -0.47
SMG6-214ENST00000573827 NBDYA0A0U1RRE5 68 aa12.08□□□□□ -0.48
SMG6-214ENST00000573827 H3BNG1 76 aa12.08□□□□□ -0.48
SMG6-214ENST00000573827 IFNA5P01569 189 aa12.08□□□□□ -0.48
SMG6-214ENST00000573827 GPX1P07203 203 aa12.08□□□□□ -0.48
SMG6-214ENST00000573827 OR5I1Q13606 314 aa12.08□□□□□ -0.48
SMG6-214ENST00000573827 ATG101Q9BSB4 218 aa12.08□□□□□ -0.48
SMG6-214ENST00000573827 A0A0J9YY99 117 aa12.07□□□□□ -0.48
SMG6-214ENST00000573827 DIRC3C9JPN6 131 aa12.07□□□□□ -0.48
SMG6-214ENST00000573827 PTTG1O95997 202 aa12.07□□□□□ -0.48
SMG6-214ENST00000573827 RAB2AP61019 212 aa12.07□□□□□ -0.48
SMG6-214ENST00000573827 ZNF266Q14584 549 aa12.07□□□□□ -0.48
SMG6-214ENST00000573827 KHDC3LQ587J8 217 aa12.07□□□□□ -0.48
SMG6-214ENST00000573827 IBA57Q5T440 356 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms