RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 ZNF738Q8NE65 137 aa14.74□□□□□ -0.05
RPAIN-210ENST00000571613 SAV1Q9H4B6 383 aaPredicted RBP14.74□□□□□ -0.05
RPAIN-210ENST00000571613 NOTCH2Q04721 2471 aa14.74□□□□□ -0.05
RPAIN-210ENST00000571613 C2orf70A6NJV1 201 aa14.73□□□□□ -0.05
RPAIN-210ENST00000571613 CBLN1P23435 193 aa14.73□□□□□ -0.05
RPAIN-210ENST00000571613 FAM162BQ5T6X4 162 aa14.73□□□□□ -0.05
RPAIN-210ENST00000571613 XKRY2A2RUG3 117 aa14.72□□□□□ -0.05
RPAIN-210ENST00000571613 PRAC2D3DTV9 90 aa14.72□□□□□ -0.05
RPAIN-210ENST00000571613 MT-ND6P03923 174 aa14.72□□□□□ -0.05
RPAIN-210ENST00000571613 ZNF138P52744 262 aa14.72□□□□□ -0.05
RPAIN-210ENST00000571613 ACTL10Q5JWF8 245 aa14.72□□□□□ -0.05
RPAIN-210ENST00000571613 LINC00477Q96M19 166 aa14.72□□□□□ -0.05
RPAIN-210ENST00000571613 TRAPPC1Q9Y5R8 145 aa14.72□□□□□ -0.05
RPAIN-210ENST00000571613 TSSC4Q9Y5U2 329 aaPredicted RBP14.72□□□□□ -0.05
RPAIN-210ENST00000571613 ANK3Q12955 4377 aaKnown RBP14.72□□□□□ -0.05
RPAIN-210ENST00000571613 TCF21O43680 179 aa14.71□□□□□ -0.05
RPAIN-210ENST00000571613 ATP5L2Q7Z4Y8 100 aa14.71□□□□□ -0.05
RPAIN-210ENST00000571613 OR2D3Q8NGH3 330 aa14.71□□□□□ -0.05
RPAIN-210ENST00000571613 OR10J6PQ8NGY7 276 aa14.71□□□□□ -0.05
RPAIN-210ENST00000571613 GNB1LQ9BYB4 327 aa14.71□□□□□ -0.05
RPAIN-210ENST00000571613 CA1P00915 261 aaPredicted RBP14.71□□□□□ -0.06
RPAIN-210ENST00000571613 TCL1AP56279 114 aa14.71□□□□□ -0.06
RPAIN-210ENST00000571613 PAFAH1B2P68402 229 aa14.71□□□□□ -0.06
RPAIN-210ENST00000571613 C8orf49Q96NF6 230 aa14.71□□□□□ -0.06
RPAIN-210ENST00000571613 NEU1Q99519 415 aa14.71□□□□□ -0.06
RPAIN-210ENST00000571613 AGPAT4-IT1Q9H0P7 198 aa14.71□□□□□ -0.06
RPAIN-210ENST00000571613 HIGD1CA8MV81 97 aa14.7□□□□□ -0.06
RPAIN-210ENST00000571613 PHOX2AO14813 284 aa14.7□□□□□ -0.06
RPAIN-210ENST00000571613 RPS20P60866 119 aaKnown RBP14.7□□□□□ -0.06
RPAIN-210ENST00000571613 SRSF2Q01130 221 aaKnown RBP14.7□□□□□ -0.06
RPAIN-210ENST00000571613 Q6AWC8 147 aa14.7□□□□□ -0.06
RPAIN-210ENST00000571613 C18orf65Q6ZTR6 163 aa14.7□□□□□ -0.06
RPAIN-210ENST00000571613 NUP35Q8NFH5 326 aa14.7□□□□□ -0.06
RPAIN-210ENST00000571613 ASCL2Q99929 193 aa14.7□□□□□ -0.06
RPAIN-210ENST00000571613 INAFM1C9JVW0 142 aa14.69□□□□□ -0.06
RPAIN-210ENST00000571613 HIST1H2BKO60814 126 aa14.69□□□□□ -0.06
RPAIN-210ENST00000571613 HIST1H2BJP06899 126 aa14.69□□□□□ -0.06
RPAIN-210ENST00000571613 HIST1H2BOP23527 126 aa14.69□□□□□ -0.06
RPAIN-210ENST00000571613 HIST1H2BBP33778 126 aa14.69□□□□□ -0.06
RPAIN-210ENST00000571613 CRIP1P50238 77 aa14.69□□□□□ -0.06
RPAIN-210ENST00000571613 SLURP1P55000 103 aa14.69□□□□□ -0.06
RPAIN-210ENST00000571613 FOXA3P55318 350 aaPredicted RBP14.69□□□□□ -0.06
RPAIN-210ENST00000571613 HIST1H2BDP58876 126 aa14.69□□□□□ -0.06
RPAIN-210ENST00000571613 HIST1H2BCP62807 126 aa14.69□□□□□ -0.06
RPAIN-210ENST00000571613 ERCC8Q13216 396 aa14.69□□□□□ -0.06
RPAIN-210ENST00000571613 HIST2H2BEQ16778 126 aa14.69□□□□□ -0.06
RPAIN-210ENST00000571613 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.69□□□□□ -0.06
RPAIN-210ENST00000571613 OR9G4Q8NGQ1 327 aa14.69□□□□□ -0.06
RPAIN-210ENST00000571613 DCANP1Q8TF63 244 aa14.69□□□□□ -0.06
RPAIN-210ENST00000571613 FRZBQ92765 325 aa14.69□□□□□ -0.06
RPAIN-210ENST00000571613 HIST1H2BHQ93079 126 aa14.69□□□□□ -0.06
RPAIN-210ENST00000571613 HIST1H2BNQ99877 126 aa14.69□□□□□ -0.06
RPAIN-210ENST00000571613 HIST1H2BMQ99879 126 aa14.69□□□□□ -0.06
RPAIN-210ENST00000571613 TRBV7-9A0A0J9YWB2 115 aa14.68□□□□□ -0.06
RPAIN-210ENST00000571613 FABP5P3A8MUU1 101 aa14.68□□□□□ -0.06
RPAIN-210ENST00000571613 TRGC1P0CF51 173 aa14.68□□□□□ -0.06
RPAIN-210ENST00000571613 SNRPD3P62318 126 aaKnown RBP14.68□□□□□ -0.06
RPAIN-210ENST00000571613 DEFB136Q30KP8 78 aa14.68□□□□□ -0.06
RPAIN-210ENST00000571613 RBPMS2Q6ZRY4 209 aaKnown RBP14.68□□□□□ -0.06
RPAIN-210ENST00000571613 Q8TAT8 98 aa14.68□□□□□ -0.06
RPAIN-210ENST00000571613 C20orf173Q96LM9 149 aa14.68□□□□□ -0.06
RPAIN-210ENST00000571613 MS4A6AQ9H2W1 248 aa14.68□□□□□ -0.06
RPAIN-210ENST00000571613 RNF114Q9Y508 228 aa14.68□□□□□ -0.06
RPAIN-210ENST00000571613 IGKV3-7A0A075B6H7 116 aa14.68□□□□□ -0.06
RPAIN-210ENST00000571613 FABP9Q0Z7S8 132 aa14.68□□□□□ -0.06
RPAIN-210ENST00000571613 TMEM189A5PLL7 270 aa14.67□□□□□ -0.06
RPAIN-210ENST00000571613 C5orf52A6NGY3 159 aa14.67□□□□□ -0.06
RPAIN-210ENST00000571613 SH2D1AO60880 128 aa14.67□□□□□ -0.06
RPAIN-210ENST00000571613 HLA-DQA1P01909 254 aa14.67□□□□□ -0.06
RPAIN-210ENST00000571613 CD28P10747 220 aa14.67□□□□□ -0.06
RPAIN-210ENST00000571613 TRAV2A0A0B4J234 112 aa14.66□□□□□ -0.06
RPAIN-210ENST00000571613 EDN2P20800 178 aa14.66□□□□□ -0.06
RPAIN-210ENST00000571613 HIST1H1AQ02539 215 aaPredicted RBP14.66□□□□□ -0.06
RPAIN-210ENST00000571613 OR8A1Q8NGG7 326 aa14.66□□□□□ -0.06
RPAIN-210ENST00000571613 A0A1B0GUS0 222 aa14.65□□□□□ -0.06
RPAIN-210ENST00000571613 SNURFLB1AK76 121 aa14.65□□□□□ -0.06
RPAIN-210ENST00000571613 PRB4P10163 310 aaPredicted RBP14.65□□□□□ -0.06
RPAIN-210ENST00000571613 SNRPEP62304 92 aaKnown RBP14.65□□□□□ -0.06
RPAIN-210ENST00000571613 FHL3Q13643 280 aa14.65□□□□□ -0.06
RPAIN-210ENST00000571613 MRPL54Q6P161 138 aaKnown RBP14.65□□□□□ -0.06
RPAIN-210ENST00000571613 GPR61Q9BZJ8 451 aa14.65□□□□□ -0.06
RPAIN-210ENST00000571613 K7EQG2 157 aa14.65□□□□□ -0.06
RPAIN-210ENST00000571613 HAX1O00165 279 aa14.65□□□□□ -0.06
RPAIN-210ENST00000571613 CCL24O00175 119 aa14.65□□□□□ -0.06
RPAIN-210ENST00000571613 CRLF1O75462 422 aa14.65□□□□□ -0.06
RPAIN-210ENST00000571613 PROK1P58294 105 aa14.65□□□□□ -0.06
RPAIN-210ENST00000571613 Q71RC1 249 aaPredicted RBP14.65□□□□□ -0.06
RPAIN-210ENST00000571613 GTSF1Q8WW33 167 aa14.65□□□□□ -0.06
RPAIN-210ENST00000571613 CITED2Q99967 270 aaPredicted RBP14.65□□□□□ -0.06
RPAIN-210ENST00000571613 SPINK4O60575 86 aa14.64□□□□□ -0.07
RPAIN-210ENST00000571613 WFDC3Q8IUB2 231 aa14.64□□□□□ -0.07
RPAIN-210ENST00000571613 DLX4Q92988 240 aaPredicted RBP14.64□□□□□ -0.07
RPAIN-210ENST00000571613 MRPL18Q9H0U6 180 aaKnown RBP14.64□□□□□ -0.07
RPAIN-210ENST00000571613 A0A1B0GW15 77 aa14.63□□□□□ -0.07
RPAIN-210ENST00000571613 UBE2CO00762 179 aa14.63□□□□□ -0.07
RPAIN-210ENST00000571613 S100A8P05109 93 aa14.63□□□□□ -0.07
RPAIN-210ENST00000571613 NDUFA6P56556 154 aa14.63□□□□□ -0.07
RPAIN-210ENST00000571613 TMEM136Q6ZRR5 245 aa14.63□□□□□ -0.07
RPAIN-210ENST00000571613 BORCS7Q96B45 105 aa14.63□□□□□ -0.07
RPAIN-210ENST00000571613 RAX2Q96IS3 184 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 196.3 ms