RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 CCL17Q92583 94 aa6.29□□□□□ -1.4
TCF4-246ENST00000570287 AP1S3Q96PC3 154 aa6.29□□□□□ -1.4
TCF4-246ENST00000570287 MRPL20Q9BYC9 149 aaKnown RBP6.29□□□□□ -1.4
TCF4-246ENST00000570287 ZNRD1Q9P1U0 126 aa6.29□□□□□ -1.4
TCF4-246ENST00000570287 KAAG1Q9UBP8 84 aa6.29□□□□□ -1.4
TCF4-246ENST00000570287 RABAC1Q9UI14 185 aa6.29□□□□□ -1.4
TCF4-246ENST00000570287 SPCS1Q9Y6A9 102 aa6.29□□□□□ -1.4
TCF4-246ENST00000570287 MUC6Q6W4X9 2439 aa6.29□□□□□ -1.4
TCF4-246ENST00000570287 SHISA9B4DS77 424 aa6.29□□□□□ -1.4
TCF4-246ENST00000570287 KLRB1Q12918 225 aa6.29□□□□□ -1.4
TCF4-246ENST00000570287 SOX21Q9Y651 276 aaPredicted RBP6.29□□□□□ -1.4
TCF4-246ENST00000570287 ACACAQ13085 2346 aa6.29□□□□□ -1.4
TCF4-246ENST00000570287 INS-IGF2F8WCM5 200 aa6.28□□□□□ -1.4
TCF4-246ENST00000570287 PRTN3P24158 256 aa6.28□□□□□ -1.4
TCF4-246ENST00000570287 RPL13AP40429 203 aaKnown RBP6.28□□□□□ -1.4
TCF4-246ENST00000570287 MIR17HGQ75NE6 70 aa6.28□□□□□ -1.4
TCF4-246ENST00000570287 RITA1Q96K30 269 aa6.28□□□□□ -1.4
TCF4-246ENST00000570287 MAP6D1Q9H9H5 199 aa6.28□□□□□ -1.4
TCF4-246ENST00000570287 DYNLRB1Q9NP97 96 aa6.28□□□□□ -1.4
TCF4-246ENST00000570287 CENPVL3A0A0U1RRI6 287 aa6.28□□□□□ -1.4
TCF4-246ENST00000570287 E7EQL1 145 aa6.28□□□□□ -1.4
TCF4-246ENST00000570287 COL8A2P25067 703 aa6.28□□□□□ -1.4
TCF4-246ENST00000570287 PRR30Q53SZ7 412 aaPredicted RBP6.28□□□□□ -1.4
TCF4-246ENST00000570287 LYPD2Q6UXB3 125 aa6.28□□□□□ -1.4
TCF4-246ENST00000570287 LCNL1Q6ZST4 164 aa6.28□□□□□ -1.4
TCF4-246ENST00000570287 PDPNQ86YL7 162 aa6.28□□□□□ -1.4
TCF4-246ENST00000570287 NDUFA4L2Q9NRX3 87 aa6.28□□□□□ -1.4
TCF4-246ENST00000570287 SPANXB1Q9NS25 103 aaPredicted RBP6.28□□□□□ -1.4
TCF4-246ENST00000570287 ZNF355PQ9NSJ1 428 aa6.28□□□□□ -1.4
TCF4-246ENST00000570287 HIGD1CA8MV81 97 aa6.28□□□□□ -1.4
TCF4-246ENST00000570287 RNASE2P10153 161 aaKnown RBP6.28□□□□□ -1.4
TCF4-246ENST00000570287 HBBP68871 147 aa6.28□□□□□ -1.4
TCF4-246ENST00000570287 OR4C13Q8NGP0 309 aa6.28□□□□□ -1.4
TCF4-246ENST00000570287 NABP2Q9BQ15 211 aa6.28□□□□□ -1.4
TCF4-246ENST00000570287 C19orf24Q9BVV8 132 aa6.28□□□□□ -1.4
TCF4-246ENST00000570287 SSBP3Q9BWW4 388 aaPredicted RBP6.28□□□□□ -1.4
TCF4-246ENST00000570287 C1QTNF4Q9BXJ3 329 aa6.28□□□□□ -1.4
TCF4-246ENST00000570287 MAP1BP46821 2468 aaKnown RBP6.28□□□□□ -1.4
TCF4-246ENST00000570287 APC2O95996 2303 aa6.27□□□□□ -1.41
TCF4-246ENST00000570287 FABP5P3A8MUU1 101 aa6.27□□□□□ -1.41
TCF4-246ENST00000570287 LOXP28300 417 aaPredicted RBP6.27□□□□□ -1.41
TCF4-246ENST00000570287 ZNF137PP52743 207 aa6.27□□□□□ -1.41
TCF4-246ENST00000570287 DLX6P56179 175 aa6.27□□□□□ -1.41
TCF4-246ENST00000570287 ERHP84090 104 aaKnown RBP6.27□□□□□ -1.41
TCF4-246ENST00000570287 TMEM167AQ8TBQ9 72 aa6.27□□□□□ -1.41
TCF4-246ENST00000570287 TMEM133Q9H2Q1 129 aa6.27□□□□□ -1.41
TCF4-246ENST00000570287 CTSZQ9UBR2 303 aa6.27□□□□□ -1.41
TCF4-246ENST00000570287 MGST1P10620 155 aaKnown RBP6.27□□□□□ -1.41
TCF4-246ENST00000570287 FABP2P12104 132 aa6.27□□□□□ -1.41
TCF4-246ENST00000570287 TMEM155Q4W5P6 130 aa6.27□□□□□ -1.41
TCF4-246ENST00000570287 OR4X2Q8NGF9 303 aa6.27□□□□□ -1.41
TCF4-246ENST00000570287 F8W1H4 67 aa6.26□□□□□ -1.41
TCF4-246ENST00000570287 OR9G1Q8NH87 305 aa6.26□□□□□ -1.41
TCF4-246ENST00000570287 ZNF747Q9BV97 191 aa6.26□□□□□ -1.41
TCF4-246ENST00000570287 ATMQ13315 3056 aa6.26□□□□□ -1.41
TCF4-246ENST00000570287 PRSS22Q9GZN4 317 aa6.26□□□□□ -1.41
TCF4-246ENST00000570287 TNCP24821 2201 aa6.26□□□□□ -1.41
TCF4-246ENST00000570287 IGKV1OR2-108A0A075B7D4 117 aa6.26□□□□□ -1.41
TCF4-246ENST00000570287 PHLDA1Q8WV24 401 aaPredicted RBP6.26□□□□□ -1.41
TCF4-246ENST00000570287 VGLL1Q99990 258 aa6.26□□□□□ -1.41
TCF4-246ENST00000570287 GFRA4Q9GZZ7 299 aa6.26□□□□□ -1.41
TCF4-246ENST00000570287 TMEM126AQ9H061 195 aa6.26□□□□□ -1.41
TCF4-246ENST00000570287 V9GYY9 64 aa6.26□□□□□ -1.41
TCF4-246ENST00000570287 CACNA1AO00555 2505 aa6.25□□□□□ -1.41
TCF4-246ENST00000570287 IGLV2-23P01705 113 aa6.25□□□□□ -1.41
TCF4-246ENST00000570287 IGHV1-8P0DP01 117 aa6.25□□□□□ -1.41
TCF4-246ENST00000570287 GTSF1Q8WW33 167 aa6.25□□□□□ -1.41
TCF4-246ENST00000570287 INSIG2Q9Y5U4 225 aa6.25□□□□□ -1.41
TCF4-246ENST00000570287 PIEZO2Q9H5I5 2752 aa6.25□□□□□ -1.41
TCF4-246ENST00000570287 J3QR89 54 aa6.25□□□□□ -1.41
TCF4-246ENST00000570287 FSTL3O95633 263 aa6.25□□□□□ -1.41
TCF4-246ENST00000570287 OXTP01178 125 aa6.25□□□□□ -1.41
TCF4-246ENST00000570287 SUB1P53999 127 aaKnown RBP eCLIP6.25□□□□□ -1.41
TCF4-246ENST00000570287 TCTAP57738 103 aa6.25□□□□□ -1.41
TCF4-246ENST00000570287 TAS2R45P59539 299 aa6.25□□□□□ -1.41
TCF4-246ENST00000570287 DIAPH2-AS1Q14236 149 aa6.25□□□□□ -1.41
TCF4-246ENST00000570287 VMA21Q3ZAQ7 101 aa6.25□□□□□ -1.41
TCF4-246ENST00000570287 FBXL19-AS1Q494R0 122 aa6.25□□□□□ -1.41
TCF4-246ENST00000570287 GATD1Q8NB37 220 aa6.25□□□□□ -1.41
TCF4-246ENST00000570287 PIFOQ8TCI5 191 aa6.25□□□□□ -1.41
TCF4-246ENST00000570287 PCNX1Q96RV3 2341 aa6.25□□□□□ -1.41
TCF4-246ENST00000570287 ZNF207O43670 478 aaKnown RBP6.24□□□□□ -1.41
TCF4-246ENST00000570287 NCR2O95944 276 aa6.24□□□□□ -1.41
TCF4-246ENST00000570287 RPL24P83731 157 aaKnown RBP6.24□□□□□ -1.41
TCF4-246ENST00000570287 ODF3L2Q3SX64 289 aa6.24□□□□□ -1.41
TCF4-246ENST00000570287 RPEQ96AT9 228 aa6.24□□□□□ -1.41
TCF4-246ENST00000570287 FAM167A-AS1Q96KT0 104 aa6.24□□□□□ -1.41
TCF4-246ENST00000570287 NAA38Q9BRA0 125 aaKnown RBP6.24□□□□□ -1.41
TCF4-246ENST00000570287 MRPL32Q9BYC8 188 aaKnown RBP6.24□□□□□ -1.41
TCF4-246ENST00000570287 SMG1Q96Q15 3661 aaKnown RBP6.24□□□□□ -1.41
TCF4-246ENST00000570287 ROS1P08922 2347 aa6.24□□□□□ -1.41
TCF4-246ENST00000570287 DMXL2Q8TDJ6 3036 aa6.24□□□□□ -1.41
TCF4-246ENST00000570287 APOHP02749 345 aaPredicted RBP6.24□□□□□ -1.41
TCF4-246ENST00000570287 MYCNOSP40205 109 aa6.24□□□□□ -1.41
TCF4-246ENST00000570287 FOXA3P55318 350 aaPredicted RBP6.24□□□□□ -1.41
TCF4-246ENST00000570287 Q6ZSV7 163 aa6.24□□□□□ -1.41
TCF4-246ENST00000570287 SLC25A33Q9BSK2 321 aa6.24□□□□□ -1.41
TCF4-246ENST00000570287 MLST8Q9BVC4 326 aa6.24□□□□□ -1.41
TCF4-246ENST00000570287 RALYQ9UKM9 306 aaKnown RBP6.24□□□□□ -1.41
TCF4-246ENST00000570287 PTPRZ1P23471 2315 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms