RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 FAM78BQ5VT40 261 aa3.53□□□□□ -1.84
CNOT1-219ENST00000569882 MIC13Q5XKP0 118 aa3.53□□□□□ -1.84
CNOT1-219ENST00000569882 LCN15Q6UWW0 184 aa3.53□□□□□ -1.84
CNOT1-219ENST00000569882 RNF182Q8N6D2 247 aa3.53□□□□□ -1.84
CNOT1-219ENST00000569882 TMEM252Q8N6L7 170 aa3.53□□□□□ -1.84
CNOT1-219ENST00000569882 OR5C1Q8NGR4 320 aa3.53□□□□□ -1.84
CNOT1-219ENST00000569882 PPP1R1CQ8WVI7 109 aa3.53□□□□□ -1.84
CNOT1-219ENST00000569882 MGST2Q99735 147 aa3.53□□□□□ -1.84
CNOT1-219ENST00000569882 MARVELD1Q9BSK0 173 aa3.53□□□□□ -1.84
CNOT1-219ENST00000569882 SMIM3Q9BZL3 60 aa3.53□□□□□ -1.84
CNOT1-219ENST00000569882 AAMDCQ9H7C9 122 aa3.53□□□□□ -1.84
CNOT1-219ENST00000569882 DNAJC4Q9NNZ3 241 aa3.53□□□□□ -1.84
CNOT1-219ENST00000569882 SLC39A9Q9NUM3 307 aa3.53□□□□□ -1.84
CNOT1-219ENST00000569882 PXMP4Q9Y6I8 212 aa3.53□□□□□ -1.84
CNOT1-219ENST00000569882 HLA-DRB4X5D2U9 266 aa3.53□□□□□ -1.84
CNOT1-219ENST00000569882 IGHV4-28A0A0C4DH34 117 aa3.52□□□□□ -1.85
CNOT1-219ENST00000569882 TEX48A0A1B0GUV7 120 aa3.52□□□□□ -1.85
CNOT1-219ENST00000569882 TMEM189A5PLL7 270 aa3.52□□□□□ -1.85
CNOT1-219ENST00000569882 GAGE10A6NGK3 116 aa3.52□□□□□ -1.85
CNOT1-219ENST00000569882 C5orf52A6NGY3 159 aa3.52□□□□□ -1.85
CNOT1-219ENST00000569882 PMS2P5A8MQ11 134 aa3.52□□□□□ -1.85
CNOT1-219ENST00000569882 F6UB75 175 aa3.52□□□□□ -1.85
CNOT1-219ENST00000569882 H3BMM0 161 aa3.52□□□□□ -1.85
CNOT1-219ENST00000569882 SMLR1H3BR10 107 aa3.52□□□□□ -1.85
CNOT1-219ENST00000569882 ARPC5O15511 151 aa3.52□□□□□ -1.85
CNOT1-219ENST00000569882 OR7C2O60412 319 aa3.52□□□□□ -1.85
CNOT1-219ENST00000569882 SNRPCP09234 159 aaKnown RBP3.52□□□□□ -1.85
CNOT1-219ENST00000569882 GYPEP15421 78 aa3.52□□□□□ -1.85
CNOT1-219ENST00000569882 HTN3P15516 51 aa3.52□□□□□ -1.85
CNOT1-219ENST00000569882 C4BPBP20851 252 aa3.52□□□□□ -1.85
CNOT1-219ENST00000569882 TSPOP30536 169 aa3.52□□□□□ -1.85
CNOT1-219ENST00000569882 CNN1P51911 297 aaKnown RBP3.52□□□□□ -1.85
CNOT1-219ENST00000569882 TAS2R45P59539 299 aa3.52□□□□□ -1.85
CNOT1-219ENST00000569882 NHLH2Q02577 135 aa3.52□□□□□ -1.85
CNOT1-219ENST00000569882 ARL16Q0P5N6 197 aa3.52□□□□□ -1.85
CNOT1-219ENST00000569882 RRN3P1Q2M238 152 aa3.52□□□□□ -1.85
CNOT1-219ENST00000569882 C5orf47Q569G3 176 aa3.52□□□□□ -1.85
CNOT1-219ENST00000569882 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.52□□□□□ -1.85
CNOT1-219ENST00000569882 TMEM182Q6ZP80 229 aaPredicted RBP3.52□□□□□ -1.85
CNOT1-219ENST00000569882 INO80EQ8NBZ0 244 aaPredicted RBP3.52□□□□□ -1.85
CNOT1-219ENST00000569882 PHLDA1Q8WV24 401 aaPredicted RBP3.52□□□□□ -1.85
CNOT1-219ENST00000569882 BLNKQ8WV28 456 aa3.52□□□□□ -1.85
CNOT1-219ENST00000569882 ATP5SQ99766 215 aa3.52□□□□□ -1.85
CNOT1-219ENST00000569882 SLC35B3Q9H1N7 401 aa3.52□□□□□ -1.85
CNOT1-219ENST00000569882 C11orf68Q9H3H3 251 aaKnown RBP3.52□□□□□ -1.85
CNOT1-219ENST00000569882 WDR83OSQ9Y284 106 aa3.52□□□□□ -1.85
CNOT1-219ENST00000569882 RFNGQ9Y644 331 aa3.52□□□□□ -1.85
CNOT1-219ENST00000569882 ALG5Q9Y673 324 aa3.52□□□□□ -1.85
CNOT1-219ENST00000569882 STAB2Q8WWQ8 2551 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 A0A0J9YX75 114 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 SMIM9A6NGZ8 99 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 IGLL5B9A064 214 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 C11orf94C9JXX5 98 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 H3BTX0 84 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 M0R2Z0 102 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 MPC2O95563 127 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 S100A8P05109 93 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 ZNF705DP0CH99 300 aaPredicted RBP3.51□□□□□ -1.85
CNOT1-219ENST00000569882 ZNF705BP0CI00 300 aaPredicted RBP3.51□□□□□ -1.85
CNOT1-219ENST00000569882 SPART-AS1P0CW21 52 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 CXCL2P19875 107 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 RPL12P30050 165 aaKnown RBP3.51□□□□□ -1.85
CNOT1-219ENST00000569882 CSN1S1P47710 185 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 RPL29P47914 159 aaKnown RBP3.51□□□□□ -1.85
CNOT1-219ENST00000569882 FGF8P55075 233 aaPredicted RBP3.51□□□□□ -1.85
CNOT1-219ENST00000569882 DEFB1P60022 68 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 PLP1P60201 277 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 NANOS2P60321 138 aaKnown RBP3.51□□□□□ -1.85
CNOT1-219ENST00000569882 BLOC1S1P78537 153 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 IFITM3Q01628 133 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 ZNF266Q14584 549 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 OPCMLQ14982 345 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 SPINK13Q1W4C9 94 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 KHDC3LQ587J8 217 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 FFAR4Q5NUL3 377 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 FAM74A1Q5RGS3 127 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 GDF5OSQ5U4N7 250 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 CEMP1Q6PRD7 247 aaPredicted RBP3.51□□□□□ -1.85
CNOT1-219ENST00000569882 ZFP82Q8N141 532 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 OR4C5Q8NGB2 326 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 C2CD4CQ8TF44 421 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 RPUSD4Q96CM3 377 aaKnown RBP3.51□□□□□ -1.85
CNOT1-219ENST00000569882 LINC01587Q99440 93 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 NPCDR1Q9BY65 106 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 OR5AC2Q9NZP5 309 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 URGCP-MRPS24S4R325 110 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 COL7A1Q02388 2944 aa3.51□□□□□ -1.85
CNOT1-219ENST00000569882 TRAV12-2A0A075B6T6 113 aa3.5□□□□□ -1.85
CNOT1-219ENST00000569882 FXYD6-FXYD2A0A087WZ82 144 aa3.5□□□□□ -1.85
CNOT1-219ENST00000569882 A0A087X0K7 114 aa3.5□□□□□ -1.85
CNOT1-219ENST00000569882 BORCS7-ASMTA0A0B4J1R7 106 aa3.5□□□□□ -1.85
CNOT1-219ENST00000569882 TRAV10A0A0B4J240 114 aa3.5□□□□□ -1.85
CNOT1-219ENST00000569882 LCE6AA0A183 80 aa3.5□□□□□ -1.85
CNOT1-219ENST00000569882 LOC102723971A0A1B0GUV8 181 aa3.5□□□□□ -1.85
CNOT1-219ENST00000569882 NUDT3O95989 172 aa3.5□□□□□ -1.85
CNOT1-219ENST00000569882 HIST1H1EP10412 219 aaKnown RBP3.5□□□□□ -1.85
CNOT1-219ENST00000569882 CXCL3P19876 107 aa3.5□□□□□ -1.85
CNOT1-219ENST00000569882 HLA-DMBP28068 263 aa3.5□□□□□ -1.85
CNOT1-219ENST00000569882 LEPP41159 167 aa3.5□□□□□ -1.85
CNOT1-219ENST00000569882 H2BFSP57053 126 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms