RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 ZNF324O75467 553 aaPredicted RBP5.47□□□□□ -1.53
CDH3-209ENST00000569080 ATP5G1P05496 136 aa5.47□□□□□ -1.53
CDH3-209ENST00000569080 OR10J4P0C629 311 aa5.47□□□□□ -1.53
CDH3-209ENST00000569080 PET100P0DJ07 73 aa5.47□□□□□ -1.53
CDH3-209ENST00000569080 HTN1P15515 57 aa5.47□□□□□ -1.53
CDH3-209ENST00000569080 RPL12P30050 165 aaKnown RBP5.47□□□□□ -1.53
CDH3-209ENST00000569080 LEPP41159 167 aa5.47□□□□□ -1.53
CDH3-209ENST00000569080 ATP5G3P48201 142 aa5.47□□□□□ -1.53
CDH3-209ENST00000569080 BTN1A1Q13410 526 aa5.47□□□□□ -1.53
CDH3-209ENST00000569080 ICAM4Q14773 271 aa5.47□□□□□ -1.53
CDH3-209ENST00000569080 RNF212Q495C1 297 aa5.47□□□□□ -1.53
CDH3-209ENST00000569080 C9orf47Q6ZRZ4 202 aa5.47□□□□□ -1.53
CDH3-209ENST00000569080 LINC00336Q6ZUF6 198 aa5.47□□□□□ -1.53
CDH3-209ENST00000569080 C11orf72Q8NBR9 251 aa5.47□□□□□ -1.53
CDH3-209ENST00000569080 BLNKQ8WV28 456 aa5.47□□□□□ -1.53
CDH3-209ENST00000569080 PYGO2Q9BRQ0 406 aa5.47□□□□□ -1.53
CDH3-209ENST00000569080 LINC00467Q9BRT7 94 aa5.47□□□□□ -1.53
CDH3-209ENST00000569080 AGPAT4-IT1Q9H0P7 198 aa5.47□□□□□ -1.53
CDH3-209ENST00000569080 WFDC1Q9HC57 220 aa5.47□□□□□ -1.53
CDH3-209ENST00000569080 FUT9Q9Y231 359 aa5.47□□□□□ -1.53
CDH3-209ENST00000569080 LRP1BQ9NZR2 4599 aa5.47□□□□□ -1.53
CDH3-209ENST00000569080 IGLV2-18A0A075B6J9 118 aa5.46□□□□□ -1.54
CDH3-209ENST00000569080 F5H768 121 aa5.46□□□□□ -1.54
CDH3-209ENST00000569080 M0R2N4 97 aa5.46□□□□□ -1.54
CDH3-209ENST00000569080 SLC25A5P05141 298 aaKnown RBP5.46□□□□□ -1.54
CDH3-209ENST00000569080 NBEAP1P0C6P0 100 aa5.46□□□□□ -1.54
CDH3-209ENST00000569080 HOXA5P20719 270 aa5.46□□□□□ -1.54
CDH3-209ENST00000569080 CD300CQ08708 224 aa5.46□□□□□ -1.54
CDH3-209ENST00000569080 DAZ2Q13117 558 aaKnown RBP5.46□□□□□ -1.54
CDH3-209ENST00000569080 Q6ZQT7 251 aa5.46□□□□□ -1.54
CDH3-209ENST00000569080 UBE2DNLQ8IWF7 75 aa5.46□□□□□ -1.54
CDH3-209ENST00000569080 Q8TAT8 98 aa5.46□□□□□ -1.54
CDH3-209ENST00000569080 RNF141Q8WVD5 230 aa5.46□□□□□ -1.54
CDH3-209ENST00000569080 LINC00477Q96M19 166 aa5.46□□□□□ -1.54
CDH3-209ENST00000569080 VGLL1Q99990 258 aa5.46□□□□□ -1.54
CDH3-209ENST00000569080 PAXXQ9BUH6 204 aa5.46□□□□□ -1.54
CDH3-209ENST00000569080 SMIM3Q9BZL3 60 aa5.46□□□□□ -1.54
CDH3-209ENST00000569080 OR51M1Q9H341 326 aa5.46□□□□□ -1.54
CDH3-209ENST00000569080 TIMM9Q9Y5J7 89 aa5.46□□□□□ -1.54
CDH3-209ENST00000569080 ALG5Q9Y673 324 aa5.46□□□□□ -1.54
CDH3-209ENST00000569080 DNAH5Q8TE73 4624 aa5.46□□□□□ -1.54
CDH3-209ENST00000569080 C17orf112F2Z3M2 114 aa5.45□□□□□ -1.54
CDH3-209ENST00000569080 OR7C2O60412 319 aa5.45□□□□□ -1.54
CDH3-209ENST00000569080 EIF3GO75821 320 aaKnown RBP eCLIP5.45□□□□□ -1.54
CDH3-209ENST00000569080 PTTG1O95997 202 aa5.45□□□□□ -1.54
CDH3-209ENST00000569080 NMBP08949 121 aa5.45□□□□□ -1.54
CDH3-209ENST00000569080 FAM3BP58499 235 aaPredicted RBP5.45□□□□□ -1.54
CDH3-209ENST00000569080 UBE2L3P68036 154 aaKnown RBP5.45□□□□□ -1.54
CDH3-209ENST00000569080 ANXA2RQ3ZCQ2 193 aa5.45□□□□□ -1.54
CDH3-209ENST00000569080 FFAR4Q5NUL3 377 aa5.45□□□□□ -1.54
CDH3-209ENST00000569080 FAM122CQ6P4D5 195 aa5.45□□□□□ -1.54
CDH3-209ENST00000569080 Q6ZTI0 123 aa5.45□□□□□ -1.54
CDH3-209ENST00000569080 ZNRF2Q8NHG8 242 aa5.45□□□□□ -1.54
CDH3-209ENST00000569080 C18orf15Q96N68 181 aa5.45□□□□□ -1.54
CDH3-209ENST00000569080 TMPRSS5Q9H3S3 457 aa5.45□□□□□ -1.54
CDH3-209ENST00000569080 AAMDCQ9H7C9 122 aa5.45□□□□□ -1.54
CDH3-209ENST00000569080 ZNF492Q9P255 531 aa5.45□□□□□ -1.54
CDH3-209ENST00000569080 HSPG2P98160 4391 aa5.44□□□□□ -1.54
CDH3-209ENST00000569080 TRBV7-9A0A0J9YWB2 115 aa5.44□□□□□ -1.54
CDH3-209ENST00000569080 GAGE12BA1L429 117 aa5.44□□□□□ -1.54
CDH3-209ENST00000569080 RBAKDNA6NC62 111 aa5.44□□□□□ -1.54
CDH3-209ENST00000569080 SNURFLB1AK76 121 aa5.44□□□□□ -1.54
CDH3-209ENST00000569080 GAGE7O76087 117 aa5.44□□□□□ -1.54
CDH3-209ENST00000569080 GAGE12FP0CL80 117 aa5.44□□□□□ -1.54
CDH3-209ENST00000569080 GAGE12GP0CL81 117 aa5.44□□□□□ -1.54
CDH3-209ENST00000569080 GAGE12IP0CL82 117 aa5.44□□□□□ -1.54
CDH3-209ENST00000569080 TCL1AP56279 114 aa5.44□□□□□ -1.54
CDH3-209ENST00000569080 KHDC3LQ587J8 217 aa5.44□□□□□ -1.54
CDH3-209ENST00000569080 CCDC28AQ8IWP9 274 aa5.44□□□□□ -1.54
CDH3-209ENST00000569080 LYPD1Q8N2G4 141 aa5.44□□□□□ -1.54
CDH3-209ENST00000569080 ZNF680Q8NEM1 530 aa5.44□□□□□ -1.54
CDH3-209ENST00000569080 MUC4Q99102 2169 aa5.44□□□□□ -1.54
CDH3-209ENST00000569080 Q9H3A6 140 aa5.44□□□□□ -1.54
CDH3-209ENST00000569080 GSN-AS1Q9NRJ2 163 aa5.44□□□□□ -1.54
CDH3-209ENST00000569080 LINC00588Q9Y4M8 146 aa5.44□□□□□ -1.54
CDH3-209ENST00000569080 APOBP04114 4563 aaKnown RBP5.43□□□□□ -1.54
CDH3-209ENST00000569080 TRAV26-1A0A087WT03 109 aa5.43□□□□□ -1.54
CDH3-209ENST00000569080 PRSS29PA6NIE9 313 aa5.43□□□□□ -1.54
CDH3-209ENST00000569080 SPINK4O60575 86 aa5.43□□□□□ -1.54
CDH3-209ENST00000569080 NUDT3O95989 172 aa5.43□□□□□ -1.54
CDH3-209ENST00000569080 IFNA5P01569 189 aa5.43□□□□□ -1.54
CDH3-209ENST00000569080 M6PRP20645 277 aa5.43□□□□□ -1.54
CDH3-209ENST00000569080 RNASE4P34096 147 aaKnown RBP5.43□□□□□ -1.54
CDH3-209ENST00000569080 ZNF138P52744 262 aa5.43□□□□□ -1.54
CDH3-209ENST00000569080 RAB2AP61019 212 aa5.43□□□□□ -1.54
CDH3-209ENST00000569080 Q5BKY6 102 aa5.43□□□□□ -1.54
CDH3-209ENST00000569080 IBA57Q5T440 356 aaKnown RBP5.43□□□□□ -1.54
CDH3-209ENST00000569080 TMEM78Q5T7P6 136 aa5.43□□□□□ -1.54
CDH3-209ENST00000569080 EIF4E3Q8N5X7 224 aaKnown RBP5.43□□□□□ -1.54
CDH3-209ENST00000569080 RXFP4Q8TDU9 374 aa5.43□□□□□ -1.54
CDH3-209ENST00000569080 VSIG2Q96IQ7 327 aa5.43□□□□□ -1.54
CDH3-209ENST00000569080 AQP10Q96PS8 301 aa5.43□□□□□ -1.54
CDH3-209ENST00000569080 KRTAP1-5Q9BYS1 174 aa5.43□□□□□ -1.54
CDH3-209ENST00000569080 TP53TG3Q9ULZ0 132 aa5.43□□□□□ -1.54
CDH3-209ENST00000569080 KLF12Q9Y4X4 402 aa5.43□□□□□ -1.54
CDH3-209ENST00000569080 NBDYA0A0U1RRE5 68 aa5.42□□□□□ -1.54
CDH3-209ENST00000569080 DIRC3C9JPN6 131 aa5.42□□□□□ -1.54
CDH3-209ENST00000569080 G3V3Q6 166 aa5.42□□□□□ -1.54
CDH3-209ENST00000569080 H3BNG1 76 aa5.42□□□□□ -1.54
CDH3-209ENST00000569080 GPX1P07203 203 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms