RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 TAAR5O14804 337 aa7.04□□□□□ -1.28
CLK3-220ENST00000567992 HMGB3O15347 200 aaKnown RBP7.04□□□□□ -1.28
CLK3-220ENST00000567992 CDC34P49427 236 aaPredicted RBP7.04□□□□□ -1.28
CLK3-220ENST00000567992 TAS2R45P59539 299 aa7.04□□□□□ -1.28
CLK3-220ENST00000567992 PMS2P11Q13670 270 aa7.04□□□□□ -1.28
CLK3-220ENST00000567992 ZNF726P1Q15940 193 aa7.04□□□□□ -1.28
CLK3-220ENST00000567992 OR10J6PQ8NGY7 276 aa7.04□□□□□ -1.28
CLK3-220ENST00000567992 SUN5Q8TC36 379 aa7.04□□□□□ -1.28
CLK3-220ENST00000567992 GNPNAT1Q96EK6 184 aaPredicted RBP7.04□□□□□ -1.28
CLK3-220ENST00000567992 FAM19A4Q96LR4 140 aa7.04□□□□□ -1.28
CLK3-220ENST00000567992 ODF3Q96PU9 254 aa7.04□□□□□ -1.28
CLK3-220ENST00000567992 GOLT1BQ9Y3E0 138 aa7.04□□□□□ -1.28
CLK3-220ENST00000567992 IGHV3OR16-12A0A075B7B8 117 aa7.03□□□□□ -1.28
CLK3-220ENST00000567992 IGKV2-40A0A087WW87 121 aaPredicted RBP7.03□□□□□ -1.28
CLK3-220ENST00000567992 A0A1W2PPV4 95 aa7.03□□□□□ -1.28
CLK3-220ENST00000567992 SMIM9A6NGZ8 99 aa7.03□□□□□ -1.28
CLK3-220ENST00000567992 JTBO76095 146 aa7.03□□□□□ -1.28
CLK3-220ENST00000567992 IGKV2D-40P01614 121 aaPredicted RBP7.03□□□□□ -1.28
CLK3-220ENST00000567992 MBP02144 154 aa7.03□□□□□ -1.28
CLK3-220ENST00000567992 PRM2P04554 102 aa7.03□□□□□ -1.28
CLK3-220ENST00000567992 ARL14EPLP0DKL9 152 aa7.03□□□□□ -1.28
CLK3-220ENST00000567992 CDKN1BP46527 198 aa7.03□□□□□ -1.28
CLK3-220ENST00000567992 RANP62826 216 aaKnown RBP7.03□□□□□ -1.28
CLK3-220ENST00000567992 ERCC8Q13216 396 aa7.03□□□□□ -1.28
CLK3-220ENST00000567992 GFI1BQ5VTD9 330 aa7.03□□□□□ -1.28
CLK3-220ENST00000567992 PQLC2Q6ZP29 291 aa7.03□□□□□ -1.28
CLK3-220ENST00000567992 C9orf47Q6ZRZ4 202 aa7.03□□□□□ -1.28
CLK3-220ENST00000567992 C11orf45Q8TAV5 145 aa7.03□□□□□ -1.28
CLK3-220ENST00000567992 RAB24Q969Q5 203 aa7.03□□□□□ -1.28
CLK3-220ENST00000567992 ZNF471Q9BX82 626 aaPredicted RBP7.03□□□□□ -1.28
CLK3-220ENST00000567992 AGPAT4-IT1Q9H0P7 198 aa7.03□□□□□ -1.28
CLK3-220ENST00000567992 Q9H3A6 140 aa7.03□□□□□ -1.28
CLK3-220ENST00000567992 AAMDCQ9H7C9 122 aa7.03□□□□□ -1.28
CLK3-220ENST00000567992 PLAC8L1A1L4L8 177 aa7.02□□□□□ -1.29
CLK3-220ENST00000567992 CXorf65A6NEN9 183 aa7.02□□□□□ -1.29
CLK3-220ENST00000567992 TPT1P13693 172 aaKnown RBP7.02□□□□□ -1.29
CLK3-220ENST00000567992 EIF5AP63241 154 aaKnown RBP7.02□□□□□ -1.29
CLK3-220ENST00000567992 UQCC3Q6UW78 93 aa7.02□□□□□ -1.29
CLK3-220ENST00000567992 LYPD1Q8N2G4 141 aa7.02□□□□□ -1.29
CLK3-220ENST00000567992 VGLL1Q99990 258 aa7.02□□□□□ -1.29
CLK3-220ENST00000567992 DNAH6Q9C0G6 4158 aa7.02□□□□□ -1.29
CLK3-220ENST00000567992 LOC102723971A0A1B0GUV8 181 aa7.01□□□□□ -1.29
CLK3-220ENST00000567992 RAB19A4D1S5 217 aa7.01□□□□□ -1.29
CLK3-220ENST00000567992 NUPR2A6NF83 97 aa7.01□□□□□ -1.29
CLK3-220ENST00000567992 KLLNB2CW77 178 aa7.01□□□□□ -1.29
CLK3-220ENST00000567992 HBE1P02100 147 aa7.01□□□□□ -1.29
CLK3-220ENST00000567992 CRISP2P16562 243 aa7.01□□□□□ -1.29
CLK3-220ENST00000567992 GCHFRP30047 84 aa7.01□□□□□ -1.29
CLK3-220ENST00000567992 C12orf74Q32Q52 190 aa7.01□□□□□ -1.29
CLK3-220ENST00000567992 PRR9Q5T870 116 aa7.01□□□□□ -1.29
CLK3-220ENST00000567992 CEMP1Q6PRD7 247 aaPredicted RBP7.01□□□□□ -1.29
CLK3-220ENST00000567992 Q6ZTC4 211 aa7.01□□□□□ -1.29
CLK3-220ENST00000567992 PHLDA1Q8WV24 401 aaPredicted RBP7.01□□□□□ -1.29
CLK3-220ENST00000567992 ACTR3CQ9C0K3 210 aaPredicted RBP7.01□□□□□ -1.29
CLK3-220ENST00000567992 OTORQ9NRC9 128 aa7.01□□□□□ -1.29
CLK3-220ENST00000567992 PPP1R14DQ9NXH3 145 aa7.01□□□□□ -1.29
CLK3-220ENST00000567992 KMT2AQ03164 3969 aa7.01□□□□□ -1.29
CLK3-220ENST00000567992 CTXND1A0A1B0GTU2 59 aa7□□□□□ -1.29
CLK3-220ENST00000567992 TMEM189A5PLL7 270 aa7□□□□□ -1.29
CLK3-220ENST00000567992 ZNF705GA8MUZ8 300 aaPredicted RBP7□□□□□ -1.29
CLK3-220ENST00000567992 DIRC3C9JPN6 131 aa7□□□□□ -1.29
CLK3-220ENST00000567992 TEX46H3BTG2 121 aa7□□□□□ -1.29
CLK3-220ENST00000567992 AZU1P20160 251 aa7□□□□□ -1.29
CLK3-220ENST00000567992 TSPOP30536 169 aa7□□□□□ -1.29
CLK3-220ENST00000567992 LEPP41159 167 aa7□□□□□ -1.29
CLK3-220ENST00000567992 RRN3P1Q2M238 152 aa7□□□□□ -1.29
CLK3-220ENST00000567992 FAM74A1Q5RGS3 127 aa7□□□□□ -1.29
CLK3-220ENST00000567992 TMEM256Q8N2U0 113 aa7□□□□□ -1.29
CLK3-220ENST00000567992 ZFAND2AQ8N6M9 145 aa7□□□□□ -1.29
CLK3-220ENST00000567992 Q8TAT8 98 aa7□□□□□ -1.29
CLK3-220ENST00000567992 LINC00477Q96M19 166 aa7□□□□□ -1.29
CLK3-220ENST00000567992 C20orf144Q9BQM9 153 aa7□□□□□ -1.29
CLK3-220ENST00000567992 TMEM208Q9BTX3 173 aa7□□□□□ -1.29
CLK3-220ENST00000567992 ZNF492Q9P255 531 aa7□□□□□ -1.29
CLK3-220ENST00000567992 DKK2Q9UBU2 259 aa7□□□□□ -1.29
CLK3-220ENST00000567992 YTHDF2Q9Y5A9 579 aaKnown RBP7□□□□□ -1.29
CLK3-220ENST00000567992 LCE6AA0A183 80 aa6.99□□□□□ -1.29
CLK3-220ENST00000567992 RBAKDNA6NC62 111 aa6.99□□□□□ -1.29
CLK3-220ENST00000567992 PGPA6NDG6 321 aa6.99□□□□□ -1.29
CLK3-220ENST00000567992 GGTLC3B5MD39 225 aa6.99□□□□□ -1.29
CLK3-220ENST00000567992 H7BYZ3 331 aa6.99□□□□□ -1.29
CLK3-220ENST00000567992 J3KRW8 73 aa6.99□□□□□ -1.29
CLK3-220ENST00000567992 CXorf1O96002 111 aa6.99□□□□□ -1.29
CLK3-220ENST00000567992 SLC25A5P05141 298 aaKnown RBP6.99□□□□□ -1.29
CLK3-220ENST00000567992 FHITP49789 147 aa6.99□□□□□ -1.29
CLK3-220ENST00000567992 EMP1P54849 157 aa6.99□□□□□ -1.29
CLK3-220ENST00000567992 TAS2R60P59551 318 aa6.99□□□□□ -1.29
CLK3-220ENST00000567992 GNG5P63218 68 aa6.99□□□□□ -1.29
CLK3-220ENST00000567992 BTN1A1Q13410 526 aa6.99□□□□□ -1.29
CLK3-220ENST00000567992 FAM222AQ5U5X8 452 aa6.99□□□□□ -1.29
CLK3-220ENST00000567992 EIF5AL1Q6IS14 154 aaKnown RBP6.99□□□□□ -1.29
CLK3-220ENST00000567992 RNASE8Q8TDE3 154 aaKnown RBP6.99□□□□□ -1.29
CLK3-220ENST00000567992 LINC01587Q99440 93 aa6.99□□□□□ -1.29
CLK3-220ENST00000567992 TRAV12-3A0A0B4J271 114 aa6.98□□□□□ -1.29
CLK3-220ENST00000567992 TRBV7-9A0A0J9YWB2 115 aa6.98□□□□□ -1.29
CLK3-220ENST00000567992 C7orf71A4D174 169 aa6.98□□□□□ -1.29
CLK3-220ENST00000567992 ZNF324O75467 553 aaPredicted RBP6.98□□□□□ -1.29
CLK3-220ENST00000567992 SCO1O75880 301 aa6.98□□□□□ -1.29
CLK3-220ENST00000567992 SEC11BP0C7V7 166 aa6.98□□□□□ -1.29
CLK3-220ENST00000567992 CSN1S1P47710 185 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms