RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 TAS2R60P59551 318 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 RELQ04864 619 aaPredicted RBP4.34□□□□□ -1.71
SF3B3-210ENST00000567654 C16orf54Q6UWD8 224 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 Q86TA4 180 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 LURAP1LQ8IV03 231 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 OR8I2Q8N0Y5 310 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 TMEM86BQ8N661 226 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 RNF182Q8N6D2 247 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 OR4F17Q8NGA8 305 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 OR10G8Q8NGN5 311 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 GLMPQ8WWB7 406 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 TMEM190Q8WZ59 177 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 ATP6V0BQ99437 205 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 PYGO2Q9BRQ0 406 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 NPFFR1Q9GZQ6 430 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 TMEM242Q9NWH2 141 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 GAR1Q9NY12 217 aaKnown RBP4.34□□□□□ -1.71
SF3B3-210ENST00000567654 PEF1Q9UBV8 284 aaKnown RBP4.34□□□□□ -1.71
SF3B3-210ENST00000567654 KLF12Q9Y4X4 402 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 LY96Q9Y6Y9 160 aa4.34□□□□□ -1.71
SF3B3-210ENST00000567654 FLNBO75369 2602 aaKnown RBP4.34□□□□□ -1.72
SF3B3-210ENST00000567654 SORL1Q92673 2214 aa4.33□□□□□ -1.72
SF3B3-210ENST00000567654 TRBV24-1A0A075B6N3 115 aa4.33□□□□□ -1.72
SF3B3-210ENST00000567654 A0A1W2PPQ1 181 aa4.33□□□□□ -1.72
SF3B3-210ENST00000567654 TMEM89A2RUT3 159 aa4.33□□□□□ -1.72
SF3B3-210ENST00000567654 CXorf65A6NEN9 183 aa4.33□□□□□ -1.72
SF3B3-210ENST00000567654 CHEK1O14757 476 aa4.33□□□□□ -1.72
SF3B3-210ENST00000567654 GGCTO75223 188 aaKnown RBP4.33□□□□□ -1.72
SF3B3-210ENST00000567654 SCGB2A1O75556 95 aa4.33□□□□□ -1.72
SF3B3-210ENST00000567654 LTAP01374 205 aa4.33□□□□□ -1.72
SF3B3-210ENST00000567654 RPL7P18124 248 aaKnown RBP4.33□□□□□ -1.72
SF3B3-210ENST00000567654 DEFB1P60022 68 aa4.33□□□□□ -1.72
SF3B3-210ENST00000567654 PDE6HQ13956 83 aa4.33□□□□□ -1.72
SF3B3-210ENST00000567654 DEFB136Q30KP8 78 aa4.33□□□□□ -1.72
SF3B3-210ENST00000567654 PRNTQ86SH4 94 aa4.33□□□□□ -1.72
SF3B3-210ENST00000567654 BAGE2Q86Y30 109 aa4.33□□□□□ -1.72
SF3B3-210ENST00000567654 WIPF2Q8TF74 440 aaPredicted RBP4.33□□□□□ -1.72
SF3B3-210ENST00000567654 DUX3Q96PT4 197 aa4.33□□□□□ -1.72
SF3B3-210ENST00000567654 METTL26Q96S19 204 aa4.33□□□□□ -1.72
SF3B3-210ENST00000567654 ZNF331Q9NQX6 463 aaPredicted RBP4.33□□□□□ -1.72
SF3B3-210ENST00000567654 IL36BQ9NZH7 164 aa4.33□□□□□ -1.72
SF3B3-210ENST00000567654 MTORP42345 2549 aa4.33□□□□□ -1.72
SF3B3-210ENST00000567654 A0A0G2JLM5 398 aa4.32□□□□□ -1.72
SF3B3-210ENST00000567654 IGHV7-4-1A0A0J9YVY3 117 aa4.32□□□□□ -1.72
SF3B3-210ENST00000567654 TRBV6-1A0A0K0K1D8 114 aa4.32□□□□□ -1.72
SF3B3-210ENST00000567654 TMEM213A2RRL7 107 aa4.32□□□□□ -1.72
SF3B3-210ENST00000567654 C19orf71A6NCJ1 209 aa4.32□□□□□ -1.72
SF3B3-210ENST00000567654 SOCS3O14543 225 aa4.32□□□□□ -1.72
SF3B3-210ENST00000567654 LGALS1P09382 135 aaKnown RBP4.32□□□□□ -1.72
SF3B3-210ENST00000567654 CD99P14209 185 aa4.32□□□□□ -1.72
SF3B3-210ENST00000567654 RPS10P46783 165 aaKnown RBP4.32□□□□□ -1.72
SF3B3-210ENST00000567654 CRIP1P50238 77 aa4.32□□□□□ -1.72
SF3B3-210ENST00000567654 TCL1AP56279 114 aa4.32□□□□□ -1.72
SF3B3-210ENST00000567654 ERVFC1-1P60608 527 aa4.32□□□□□ -1.72
SF3B3-210ENST00000567654 UBE2G1P62253 170 aa4.32□□□□□ -1.72
SF3B3-210ENST00000567654 FLI1Q01543 452 aaPredicted RBP4.32□□□□□ -1.72
SF3B3-210ENST00000567654 ERCC8Q13216 396 aa4.32□□□□□ -1.72
SF3B3-210ENST00000567654 PSG3Q16557 428 aa4.32□□□□□ -1.72
SF3B3-210ENST00000567654 IBA57Q5T440 356 aaKnown RBP4.32□□□□□ -1.72
SF3B3-210ENST00000567654 PRR27Q6MZM9 219 aa4.32□□□□□ -1.72
SF3B3-210ENST00000567654 LYPD1Q8N2G4 141 aa4.32□□□□□ -1.72
SF3B3-210ENST00000567654 KLHDC1Q8N7A1 406 aa4.32□□□□□ -1.72
SF3B3-210ENST00000567654 TMEM75Q8N9X5 138 aa4.32□□□□□ -1.72
SF3B3-210ENST00000567654 Q8TAT8 98 aa4.32□□□□□ -1.72
SF3B3-210ENST00000567654 ZC2HC1AQ96GY0 325 aa4.32□□□□□ -1.72
SF3B3-210ENST00000567654 FMC1Q96HJ9 113 aa4.32□□□□□ -1.72
SF3B3-210ENST00000567654 FAM210BQ96KR6 192 aa4.32□□□□□ -1.72
SF3B3-210ENST00000567654 VGLL1Q99990 258 aa4.32□□□□□ -1.72
SF3B3-210ENST00000567654 TCEAL7Q9BRU2 100 aa4.32□□□□□ -1.72
SF3B3-210ENST00000567654 GPR61Q9BZJ8 451 aa4.32□□□□□ -1.72
SF3B3-210ENST00000567654 OSTCQ9NRP0 149 aa4.32□□□□□ -1.72
SF3B3-210ENST00000567654 PSG8Q9UQ74 426 aa4.32□□□□□ -1.72
SF3B3-210ENST00000567654 FN1P02751 2386 aaKnown RBP4.32□□□□□ -1.72
SF3B3-210ENST00000567654 IGKV3-7A0A075B6H7 116 aa4.31□□□□□ -1.72
SF3B3-210ENST00000567654 INAFM1C9JVW0 142 aa4.31□□□□□ -1.72
SF3B3-210ENST00000567654 PPP1R2P9O14990 202 aa4.31□□□□□ -1.72
SF3B3-210ENST00000567654 SPINK4O60575 86 aa4.31□□□□□ -1.72
SF3B3-210ENST00000567654 ZNF253O75346 499 aa4.31□□□□□ -1.72
SF3B3-210ENST00000567654 TRGC2P03986 189 aa4.31□□□□□ -1.72
SF3B3-210ENST00000567654 SRD5A1P18405 259 aa4.31□□□□□ -1.72
SF3B3-210ENST00000567654 ZNF80P51504 273 aaPredicted RBP4.31□□□□□ -1.72
SF3B3-210ENST00000567654 SLC35B1P78383 322 aa4.31□□□□□ -1.72
SF3B3-210ENST00000567654 RPL19P84098 196 aaKnown RBP4.31□□□□□ -1.72
SF3B3-210ENST00000567654 PSG9Q00887 426 aa4.31□□□□□ -1.72
SF3B3-210ENST00000567654 C1orf194Q5T5A4 169 aa4.31□□□□□ -1.72
SF3B3-210ENST00000567654 LCN12Q6JVE5 192 aa4.31□□□□□ -1.72
SF3B3-210ENST00000567654 ADAMTSL5Q6ZMM2 481 aa4.31□□□□□ -1.72
SF3B3-210ENST00000567654 FAM231DQ6ZW35 169 aa4.31□□□□□ -1.72
SF3B3-210ENST00000567654 TCF24Q7RTU0 167 aa4.31□□□□□ -1.72
SF3B3-210ENST00000567654 TMEM183AQ8IXX5 376 aa4.31□□□□□ -1.72
SF3B3-210ENST00000567654 CMTM2Q8TAZ6 248 aa4.31□□□□□ -1.72
SF3B3-210ENST00000567654 FRZBQ92765 325 aa4.31□□□□□ -1.72
SF3B3-210ENST00000567654 UBE2E2Q96LR5 201 aa4.31□□□□□ -1.72
SF3B3-210ENST00000567654 GPR82Q96P67 336 aa4.31□□□□□ -1.72
SF3B3-210ENST00000567654 RHPN1-AS1Q9BWJ2 59 aa4.31□□□□□ -1.72
SF3B3-210ENST00000567654 TMEM160Q9NX00 188 aa4.31□□□□□ -1.72
SF3B3-210ENST00000567654 MLXQ9UH92 298 aa4.31□□□□□ -1.72
SF3B3-210ENST00000567654 SMPXQ9UHP9 88 aa4.31□□□□□ -1.72
SF3B3-210ENST00000567654 HIVEP1P15822 2718 aa4.3□□□□□ -1.72
SF3B3-210ENST00000567654 NSD1Q96L73 2696 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms