RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 PEMTQ9UBM1 199 aa8.25□□□□□ -1.09
VPS9D1-206ENST00000567379 SVEP1Q4LDE5 3571 aa8.25□□□□□ -1.09
VPS9D1-206ENST00000567379 PRAC2D3DTV9 90 aa8.24□□□□□ -1.09
VPS9D1-206ENST00000567379 TCF21O43680 179 aa8.24□□□□□ -1.09
VPS9D1-206ENST00000567379 TYMSP04818 313 aa8.24□□□□□ -1.09
VPS9D1-206ENST00000567379 ZNF738Q8NE65 137 aa8.24□□□□□ -1.09
VPS9D1-206ENST00000567379 OR11H1Q8NG94 326 aa8.24□□□□□ -1.09
VPS9D1-206ENST00000567379 VGLL1Q99990 258 aa8.24□□□□□ -1.09
VPS9D1-206ENST00000567379 RPP21Q9H633 154 aaKnown RBP8.24□□□□□ -1.09
VPS9D1-206ENST00000567379 HIVEP2P31629 2446 aa8.24□□□□□ -1.09
VPS9D1-206ENST00000567379 SMIM27A0A1W2PRY6 76 aa8.23□□□□□ -1.09
VPS9D1-206ENST00000567379 C19orf71A6NCJ1 209 aa8.23□□□□□ -1.09
VPS9D1-206ENST00000567379 C2orf70A6NJV1 201 aa8.23□□□□□ -1.09
VPS9D1-206ENST00000567379 A8MWL6 223 aa8.23□□□□□ -1.09
VPS9D1-206ENST00000567379 HAX1O00165 279 aa8.23□□□□□ -1.09
VPS9D1-206ENST00000567379 SOCS3O14543 225 aa8.23□□□□□ -1.09
VPS9D1-206ENST00000567379 OVOL1O14753 267 aa8.23□□□□□ -1.09
VPS9D1-206ENST00000567379 PRB4P10163 310 aaPredicted RBP8.23□□□□□ -1.09
VPS9D1-206ENST00000567379 CD28P10747 220 aa8.23□□□□□ -1.09
VPS9D1-206ENST00000567379 CBLN1P23435 193 aa8.23□□□□□ -1.09
VPS9D1-206ENST00000567379 SLURP1P55000 103 aa8.23□□□□□ -1.09
VPS9D1-206ENST00000567379 DEFB136Q30KP8 78 aa8.23□□□□□ -1.09
VPS9D1-206ENST00000567379 CT83Q5H943 113 aa8.23□□□□□ -1.09
VPS9D1-206ENST00000567379 TMEM78Q5T7P6 136 aa8.23□□□□□ -1.09
VPS9D1-206ENST00000567379 ZFP82Q8N141 532 aa8.23□□□□□ -1.09
VPS9D1-206ENST00000567379 TSKUQ8WUA8 353 aa8.23□□□□□ -1.09
VPS9D1-206ENST00000567379 ZC2HC1AQ96GY0 325 aa8.23□□□□□ -1.09
VPS9D1-206ENST00000567379 C8orf49Q96NF6 230 aa8.23□□□□□ -1.09
VPS9D1-206ENST00000567379 PRR25Q96S07 402 aa8.23□□□□□ -1.09
VPS9D1-206ENST00000567379 RNF114Q9Y508 228 aa8.23□□□□□ -1.09
VPS9D1-206ENST00000567379 TSSC4Q9Y5U2 329 aaPredicted RBP8.23□□□□□ -1.09
VPS9D1-206ENST00000567379 IGKV3-7A0A075B6H7 116 aa8.22□□□□□ -1.09
VPS9D1-206ENST00000567379 IZUMO1RA6ND01 250 aa8.22□□□□□ -1.09
VPS9D1-206ENST00000567379 EDN2P20800 178 aa8.22□□□□□ -1.09
VPS9D1-206ENST00000567379 ZNF138P52744 262 aa8.22□□□□□ -1.09
VPS9D1-206ENST00000567379 TCL1AP56279 114 aa8.22□□□□□ -1.09
VPS9D1-206ENST00000567379 ERCC8Q13216 396 aa8.22□□□□□ -1.09
VPS9D1-206ENST00000567379 COX19Q49B96 90 aa8.22□□□□□ -1.09
VPS9D1-206ENST00000567379 SMUG1Q53HV7 270 aa8.22□□□□□ -1.09
VPS9D1-206ENST00000567379 LINC00322Q6ZN03 302 aaPredicted RBP8.22□□□□□ -1.09
VPS9D1-206ENST00000567379 C9orf47Q6ZRZ4 202 aa8.22□□□□□ -1.09
VPS9D1-206ENST00000567379 COX8CQ7Z4L0 72 aa8.22□□□□□ -1.09
VPS9D1-206ENST00000567379 OR10J6PQ8NGY7 276 aa8.22□□□□□ -1.09
VPS9D1-206ENST00000567379 C20orf173Q96LM9 149 aa8.22□□□□□ -1.09
VPS9D1-206ENST00000567379 NAT8BQ9UHF3 227 aa8.22□□□□□ -1.09
VPS9D1-206ENST00000567379 NPIPB6E9PJ23 425 aa8.21□□□□□ -1.1
VPS9D1-206ENST00000567379 CRLF1O75462 422 aa8.21□□□□□ -1.1
VPS9D1-206ENST00000567379 TRGC2P03986 189 aa8.21□□□□□ -1.1
VPS9D1-206ENST00000567379 S100A6P06703 90 aa8.21□□□□□ -1.1
VPS9D1-206ENST00000567379 PAFAH1B2P68402 229 aa8.21□□□□□ -1.1
VPS9D1-206ENST00000567379 FAM162BQ5T6X4 162 aa8.21□□□□□ -1.1
VPS9D1-206ENST00000567379 WFDC3Q8IUB2 231 aa8.21□□□□□ -1.1
VPS9D1-206ENST00000567379 C11orf44Q8N8P7 122 aa8.21□□□□□ -1.1
VPS9D1-206ENST00000567379 OR2D3Q8NGH3 330 aa8.21□□□□□ -1.1
VPS9D1-206ENST00000567379 OR9G4Q8NGQ1 327 aa8.21□□□□□ -1.1
VPS9D1-206ENST00000567379 Q8TAT8 98 aa8.21□□□□□ -1.1
VPS9D1-206ENST00000567379 LINC00477Q96M19 166 aa8.21□□□□□ -1.1
VPS9D1-206ENST00000567379 ASCL2Q99929 193 aa8.21□□□□□ -1.1
VPS9D1-206ENST00000567379 GFRA4Q9GZZ7 299 aa8.21□□□□□ -1.1
VPS9D1-206ENST00000567379 AGPAT4-IT1Q9H0P7 198 aa8.21□□□□□ -1.1
VPS9D1-206ENST00000567379 PPP1R14DQ9NXH3 145 aa8.21□□□□□ -1.1
VPS9D1-206ENST00000567379 LOC105371267A0A1B0GV96 52 aa8.2□□□□□ -1.1
VPS9D1-206ENST00000567379 A0A1W2PRX2 142 aa8.2□□□□□ -1.1
VPS9D1-206ENST00000567379 XKRY2A2RUG3 117 aa8.2□□□□□ -1.1
VPS9D1-206ENST00000567379 FAM231BA6NCW3 169 aa8.2□□□□□ -1.1
VPS9D1-206ENST00000567379 CCL24O00175 119 aa8.2□□□□□ -1.1
VPS9D1-206ENST00000567379 SH2D1AO60880 128 aa8.2□□□□□ -1.1
VPS9D1-206ENST00000567379 CA1P00915 261 aaPredicted RBP8.2□□□□□ -1.1
VPS9D1-206ENST00000567379 WDR73Q6P4I2 378 aa8.2□□□□□ -1.1
VPS9D1-206ENST00000567379 RAX2Q96IS3 184 aa8.2□□□□□ -1.1
VPS9D1-206ENST00000567379 DUX3Q96PT4 197 aa8.2□□□□□ -1.1
VPS9D1-206ENST00000567379 CITED2Q99967 270 aaPredicted RBP8.2□□□□□ -1.1
VPS9D1-206ENST00000567379 MS4A6AQ9H2W1 248 aa8.2□□□□□ -1.1
VPS9D1-206ENST00000567379 LENEPQ9Y5L5 61 aa8.2□□□□□ -1.1
VPS9D1-206ENST00000567379 TRAPPC1Q9Y5R8 145 aa8.2□□□□□ -1.1
VPS9D1-206ENST00000567379 SELENOKQ9Y6D0 94 aa8.2□□□□□ -1.1
VPS9D1-206ENST00000567379 ANK2Q01484 3957 aa8.19□□□□□ -1.1
VPS9D1-206ENST00000567379 TMEM189A5PLL7 270 aa8.19□□□□□ -1.1
VPS9D1-206ENST00000567379 CRIP1P50238 77 aa8.19□□□□□ -1.1
VPS9D1-206ENST00000567379 PROK1P58294 105 aa8.19□□□□□ -1.1
VPS9D1-206ENST00000567379 RPS20P60866 119 aaKnown RBP8.19□□□□□ -1.1
VPS9D1-206ENST00000567379 SNRPD3P62318 126 aaKnown RBP8.19□□□□□ -1.1
VPS9D1-206ENST00000567379 ACTL10Q5JWF8 245 aa8.19□□□□□ -1.1
VPS9D1-206ENST00000567379 NUP35Q8NFH5 326 aa8.19□□□□□ -1.1
VPS9D1-206ENST00000567379 DYNLRB2Q8TF09 96 aa8.19□□□□□ -1.1
VPS9D1-206ENST00000567379 DCANP1Q8TF63 244 aa8.19□□□□□ -1.1
VPS9D1-206ENST00000567379 DLX4Q92988 240 aaPredicted RBP8.19□□□□□ -1.1
VPS9D1-206ENST00000567379 NEU1Q99519 415 aa8.19□□□□□ -1.1
VPS9D1-206ENST00000567379 GPR61Q9BZJ8 451 aa8.19□□□□□ -1.1
VPS9D1-206ENST00000567379 ANK3Q12955 4377 aaKnown RBP8.19□□□□□ -1.1
VPS9D1-206ENST00000567379 A0A1B0GUS0 222 aa8.18□□□□□ -1.1
VPS9D1-206ENST00000567379 FABP5P3A8MUU1 101 aa8.18□□□□□ -1.1
VPS9D1-206ENST00000567379 HIGD1CA8MV81 97 aa8.18□□□□□ -1.1
VPS9D1-206ENST00000567379 K7EQG2 157 aa8.18□□□□□ -1.1
VPS9D1-206ENST00000567379 SPINK4O60575 86 aa8.18□□□□□ -1.1
VPS9D1-206ENST00000567379 MT-ND6P03923 174 aa8.18□□□□□ -1.1
VPS9D1-206ENST00000567379 CSN3P07498 182 aa8.18□□□□□ -1.1
VPS9D1-206ENST00000567379 TFPI2P48307 235 aa8.18□□□□□ -1.1
VPS9D1-206ENST00000567379 SRSF2Q01130 221 aaKnown RBP8.18□□□□□ -1.1
VPS9D1-206ENST00000567379 HIST1H1AQ02539 215 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms