RNA–Protein interactions for RNA: ENST00000567285.1

CNOT1-212, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-212ENST00000567285 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.8□□□□□ -1.8
CNOT1-212ENST00000567285 ZNF818PQ6ZRF7 136 aa3.8□□□□□ -1.8
CNOT1-212ENST00000567285 TMEM17Q86X19 198 aa3.8□□□□□ -1.8
CNOT1-212ENST00000567285 C11orf72Q8NBR9 251 aa3.8□□□□□ -1.8
CNOT1-212ENST00000567285 INO80EQ8NBZ0 244 aaPredicted RBP3.8□□□□□ -1.8
CNOT1-212ENST00000567285 SPACA4Q8TDM5 124 aa3.8□□□□□ -1.8
CNOT1-212ENST00000567285 RPUSD4Q96CM3 377 aaKnown RBP3.8□□□□□ -1.8
CNOT1-212ENST00000567285 CCDC124Q96CT7 223 aaKnown RBP3.8□□□□□ -1.8
CNOT1-212ENST00000567285 SH3BGRL3Q9H299 93 aa3.8□□□□□ -1.8
CNOT1-212ENST00000567285 OR51M1Q9H341 326 aa3.8□□□□□ -1.8
CNOT1-212ENST00000567285 RRP15Q9Y3B9 282 aaKnown RBP3.8□□□□□ -1.8
CNOT1-212ENST00000567285 IGKV3D-20A0A0C4DH25 116 aa3.79□□□□□ -1.8
CNOT1-212ENST00000567285 ZFP92A6NM28 416 aa3.79□□□□□ -1.8
CNOT1-212ENST00000567285 M0R2T5 61 aa3.79□□□□□ -1.8
CNOT1-212ENST00000567285 FKBP6O75344 327 aa3.79□□□□□ -1.8
CNOT1-212ENST00000567285 PGLYRP1O75594 196 aaPredicted RBP3.79□□□□□ -1.8
CNOT1-212ENST00000567285 PPYP01298 95 aa3.79□□□□□ -1.8
CNOT1-212ENST00000567285 FABP1P07148 127 aa3.79□□□□□ -1.8
CNOT1-212ENST00000567285 PTHLHP12272 177 aa3.79□□□□□ -1.8
CNOT1-212ENST00000567285 MYL12AP19105 171 aa3.79□□□□□ -1.8
CNOT1-212ENST00000567285 DTYMKP23919 212 aa3.79□□□□□ -1.8
CNOT1-212ENST00000567285 TCL1AP56279 114 aa3.79□□□□□ -1.8
CNOT1-212ENST00000567285 C2orf76Q3KRA6 126 aa3.79□□□□□ -1.8
CNOT1-212ENST00000567285 KCNIP4Q6PIL6 250 aa3.79□□□□□ -1.8
CNOT1-212ENST00000567285 Q6ZQT7 251 aa3.79□□□□□ -1.8
CNOT1-212ENST00000567285 SPATA24Q86W54 205 aa3.79□□□□□ -1.8
CNOT1-212ENST00000567285 HOGA1Q86XE5 327 aa3.79□□□□□ -1.8
CNOT1-212ENST00000567285 ARRDC1Q8N5I2 433 aa3.79□□□□□ -1.8
CNOT1-212ENST00000567285 EIF4E3Q8N5X7 224 aaKnown RBP3.79□□□□□ -1.8
CNOT1-212ENST00000567285 PHYHIPQ92561 330 aa3.79□□□□□ -1.8
CNOT1-212ENST00000567285 BORCS5Q969J3 196 aa3.79□□□□□ -1.8
CNOT1-212ENST00000567285 FAM3DQ96BQ1 224 aa3.79□□□□□ -1.8
CNOT1-212ENST00000567285 ATP6V1G3Q96LB4 118 aa3.79□□□□□ -1.8
CNOT1-212ENST00000567285 GTSF1LQ9H1H1 148 aa3.79□□□□□ -1.8
CNOT1-212ENST00000567285 ANXA10Q9UJ72 324 aa3.79□□□□□ -1.8
CNOT1-212ENST00000567285 RAB22AQ9UL26 194 aa3.79□□□□□ -1.8
CNOT1-212ENST00000567285 IGLV7-46A0A075B6I9 117 aa3.78□□□□□ -1.8
CNOT1-212ENST00000567285 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.78□□□□□ -1.8
CNOT1-212ENST00000567285 IGHV3-16A0A0C4DH30 117 aa3.78□□□□□ -1.8
CNOT1-212ENST00000567285 IGKV2-24A0A0C4DH68 120 aa3.78□□□□□ -1.8
CNOT1-212ENST00000567285 WBP4O75554 376 aaKnown RBP3.78□□□□□ -1.8
CNOT1-212ENST00000567285 LEPP41159 167 aa3.78□□□□□ -1.8
CNOT1-212ENST00000567285 HTR2BP41595 481 aa3.78□□□□□ -1.8
CNOT1-212ENST00000567285 HERV-K104P61576 105 aa3.78□□□□□ -1.8
CNOT1-212ENST00000567285 CDNFQ49AH0 187 aa3.78□□□□□ -1.8
CNOT1-212ENST00000567285 CROCCP3Q8IVE0 287 aa3.78□□□□□ -1.8
CNOT1-212ENST00000567285 OR4C5Q8NGB2 326 aa3.78□□□□□ -1.8
CNOT1-212ENST00000567285 OR10P1Q8NGE3 313 aa3.78□□□□□ -1.8
CNOT1-212ENST00000567285 SLC25A38Q96DW6 304 aa3.78□□□□□ -1.8
CNOT1-212ENST00000567285 ELF5Q9UKW6 265 aaPredicted RBP3.78□□□□□ -1.8
CNOT1-212ENST00000567285 USH2AO75445 5202 aa3.77□□□□□ -1.81
CNOT1-212ENST00000567285 IGHV1OR15-1A0A075B7D0 117 aa3.77□□□□□ -1.81
CNOT1-212ENST00000567285 A0A087WX48 190 aa3.77□□□□□ -1.81
CNOT1-212ENST00000567285 MUC21A0A0G2JKD1 596 aa3.77□□□□□ -1.81
CNOT1-212ENST00000567285 PGPA6NDG6 321 aa3.77□□□□□ -1.81
CNOT1-212ENST00000567285 METTL21EPA6NDL7 271 aa3.77□□□□□ -1.81
CNOT1-212ENST00000567285 RNASE4P34096 147 aaKnown RBP3.77□□□□□ -1.81
CNOT1-212ENST00000567285 RANBP1P43487 201 aa3.77□□□□□ -1.81
CNOT1-212ENST00000567285 ZNF90Q03938 601 aa3.77□□□□□ -1.81
CNOT1-212ENST00000567285 ELOBQ15370 118 aa3.77□□□□□ -1.81
CNOT1-212ENST00000567285 ZNF431Q8TF32 576 aaPredicted RBP3.77□□□□□ -1.81
CNOT1-212ENST00000567285 CENPNQ96H22 339 aaPredicted RBP3.77□□□□□ -1.81
CNOT1-212ENST00000567285 ZNF486Q96H40 463 aaPredicted RBP3.77□□□□□ -1.81
CNOT1-212ENST00000567285 GPR82Q96P67 336 aa3.77□□□□□ -1.81
CNOT1-212ENST00000567285 PRADC1Q9BSG0 188 aa3.77□□□□□ -1.81
CNOT1-212ENST00000567285 GABARAPL3Q9BY60 117 aa3.77□□□□□ -1.81
CNOT1-212ENST00000567285 CCDC90BQ9GZT6 254 aa3.77□□□□□ -1.81
CNOT1-212ENST00000567285 TMEM222Q9H0R3 208 aa3.77□□□□□ -1.81
CNOT1-212ENST00000567285 SSR3Q9UNL2 185 aa3.77□□□□□ -1.81
CNOT1-212ENST00000567285 ORC6Q9Y5N6 252 aa3.77□□□□□ -1.81
CNOT1-212ENST00000567285 MACF1Q9UPN3 7388 aaKnown RBP3.76□□□□□ -1.81
CNOT1-212ENST00000567285 IGLV1-50A0A075B6I6 118 aa3.76□□□□□ -1.81
CNOT1-212ENST00000567285 GABARAPH6UMI1 98 aa3.76□□□□□ -1.81
CNOT1-212ENST00000567285 SLC17A2O00624 439 aa3.76□□□□□ -1.81
CNOT1-212ENST00000567285 GABARAPO95166 117 aa3.76□□□□□ -1.81
CNOT1-212ENST00000567285 GATA1P15976 413 aaPredicted RBP3.76□□□□□ -1.81
CNOT1-212ENST00000567285 CXCL3P19876 107 aa3.76□□□□□ -1.81
CNOT1-212ENST00000567285 PSMA1P25786 263 aaKnown RBP3.76□□□□□ -1.81
CNOT1-212ENST00000567285 S100A7P31151 101 aa3.76□□□□□ -1.81
CNOT1-212ENST00000567285 GNG2P59768 71 aa3.76□□□□□ -1.81
CNOT1-212ENST00000567285 POLR2GP62487 172 aaKnown RBP eCLIP3.76□□□□□ -1.81
CNOT1-212ENST00000567285 RPS25P62851 125 aaKnown RBP3.76□□□□□ -1.81
CNOT1-212ENST00000567285 Q0VG73 95 aa3.76□□□□□ -1.81
CNOT1-212ENST00000567285 ARL6IP1Q15041 203 aa3.76□□□□□ -1.81
CNOT1-212ENST00000567285 TRIM16LQ309B1 348 aa3.76□□□□□ -1.81
CNOT1-212ENST00000567285 KRTAP20-1Q3LI63 56 aa3.76□□□□□ -1.81
CNOT1-212ENST00000567285 FAM162BQ5T6X4 162 aa3.76□□□□□ -1.81
CNOT1-212ENST00000567285 BPIFCQ8NFQ6 507 aa3.76□□□□□ -1.81
CNOT1-212ENST00000567285 OR4D5Q8NGN0 318 aa3.76□□□□□ -1.81
CNOT1-212ENST00000567285 OR10G4Q8NGN3 311 aa3.76□□□□□ -1.81
CNOT1-212ENST00000567285 RNASEH2CQ8TDP1 164 aaKnown RBP3.76□□□□□ -1.81
CNOT1-212ENST00000567285 MRGPRFQ96AM1 343 aa3.76□□□□□ -1.81
CNOT1-212ENST00000567285 ATG5Q9H1Y0 275 aa3.76□□□□□ -1.81
CNOT1-212ENST00000567285 TP53TG3Q9ULZ0 132 aa3.76□□□□□ -1.81
CNOT1-212ENST00000567285 WDR83OSQ9Y284 106 aa3.76□□□□□ -1.81
CNOT1-212ENST00000567285 AK6Q9Y3D8 172 aaKnown RBP3.76□□□□□ -1.81
CNOT1-212ENST00000567285 C7orf71A4D174 169 aa3.75□□□□□ -1.81
CNOT1-212ENST00000567285 INS-IGF2F8WCM5 200 aa3.75□□□□□ -1.81
CNOT1-212ENST00000567285 MPDU1O75352 247 aa3.75□□□□□ -1.81
CNOT1-212ENST00000567285 TCRBP04435 133 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms