RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 IGF2BP2-AS1Q96M15 143 aa8.88□□□□□ -0.99
SF3B3-208ENST00000567250 LINC00477Q96M19 166 aa8.88□□□□□ -0.99
SF3B3-208ENST00000567250 IGKV2-40A0A087WW87 121 aaPredicted RBP8.87□□□□□ -0.99
SF3B3-208ENST00000567250 DIRC3C9JPN6 131 aa8.87□□□□□ -0.99
SF3B3-208ENST00000567250 PRAC2D3DTV9 90 aa8.87□□□□□ -0.99
SF3B3-208ENST00000567250 M0R2Z0 102 aa8.87□□□□□ -0.99
SF3B3-208ENST00000567250 IGKV2D-40P01614 121 aaPredicted RBP8.87□□□□□ -0.99
SF3B3-208ENST00000567250 MIFP14174 115 aa8.87□□□□□ -0.99
SF3B3-208ENST00000567250 FHITP49789 147 aa8.87□□□□□ -0.99
SF3B3-208ENST00000567250 NKX2-5P52952 324 aaPredicted RBP8.87□□□□□ -0.99
SF3B3-208ENST00000567250 C9orf47Q6ZRZ4 202 aa8.87□□□□□ -0.99
SF3B3-208ENST00000567250 CSNK1G2-AS1Q8NCQ2 148 aa8.87□□□□□ -0.99
SF3B3-208ENST00000567250 MBD3L1Q8WWY6 194 aa8.87□□□□□ -0.99
SF3B3-208ENST00000567250 WWC2-AS2Q96NR7 200 aa8.87□□□□□ -0.99
SF3B3-208ENST00000567250 C20orf144Q9BQM9 153 aa8.87□□□□□ -0.99
SF3B3-208ENST00000567250 TMEM208Q9BTX3 173 aa8.87□□□□□ -0.99
SF3B3-208ENST00000567250 RPH3ALQ9UNE2 315 aa8.87□□□□□ -0.99
SF3B3-208ENST00000567250 TRBV7-9A0A0J9YWB2 115 aa8.86□□□□□ -0.99
SF3B3-208ENST00000567250 ZNF705EA8MWA4 302 aaPredicted RBP8.86□□□□□ -0.99
SF3B3-208ENST00000567250 HBE1P02100 147 aa8.86□□□□□ -0.99
SF3B3-208ENST00000567250 ZNF705AQ6ZN79 300 aaPredicted RBP8.86□□□□□ -0.99
SF3B3-208ENST00000567250 TMEM256Q8N2U0 113 aa8.86□□□□□ -0.99
SF3B3-208ENST00000567250 TCEAL7Q9BRU2 100 aa8.86□□□□□ -0.99
SF3B3-208ENST00000567250 C11orf68Q9H3H3 251 aaKnown RBP8.86□□□□□ -0.99
SF3B3-208ENST00000567250 DNAH9Q9NYC9 4486 aa8.85□□□□□ -0.99
SF3B3-208ENST00000567250 SMIM9A6NGZ8 99 aa8.85□□□□□ -0.99
SF3B3-208ENST00000567250 FBLL1A6NHQ2 334 aaKnown RBP8.85□□□□□ -0.99
SF3B3-208ENST00000567250 GGTLC3B5MD39 225 aa8.85□□□□□ -0.99
SF3B3-208ENST00000567250 NMBP08949 121 aa8.85□□□□□ -0.99
SF3B3-208ENST00000567250 ZNF138P52744 262 aa8.85□□□□□ -0.99
SF3B3-208ENST00000567250 UBE2G2P60604 165 aa8.85□□□□□ -0.99
SF3B3-208ENST00000567250 GOLT1AQ6ZVE7 132 aa8.85□□□□□ -0.99
SF3B3-208ENST00000567250 NEU1Q99519 415 aa8.85□□□□□ -0.99
SF3B3-208ENST00000567250 TMPRSS5Q9H3S3 457 aa8.85□□□□□ -0.99
SF3B3-208ENST00000567250 MANBALQ9NQG1 85 aa8.85□□□□□ -0.99
SF3B3-208ENST00000567250 LENEPQ9Y5L5 61 aa8.85□□□□□ -0.99
SF3B3-208ENST00000567250 TRAV12-2A0A075B6T6 113 aa8.84□□□□□ -0.99
SF3B3-208ENST00000567250 IGHV3OR16-12A0A075B7B8 117 aa8.84□□□□□ -0.99
SF3B3-208ENST00000567250 TRAV1-1A0A0B4J248 108 aa8.84□□□□□ -0.99
SF3B3-208ENST00000567250 FAM74A7A6NL05 159 aa8.84□□□□□ -0.99
SF3B3-208ENST00000567250 F6UZH7 168 aa8.84□□□□□ -0.99
SF3B3-208ENST00000567250 TCRAP04437 139 aa8.84□□□□□ -0.99
SF3B3-208ENST00000567250 CT45A10P0DMU9 189 aa8.84□□□□□ -0.99
SF3B3-208ENST00000567250 PRB4P10163 310 aaPredicted RBP8.84□□□□□ -0.99
SF3B3-208ENST00000567250 SUMO1P63165 101 aaKnown RBP8.84□□□□□ -0.99
SF3B3-208ENST00000567250 ERCC8Q13216 396 aa8.84□□□□□ -0.99
SF3B3-208ENST00000567250 ALKAL2Q6UX46 152 aa8.84□□□□□ -0.99
SF3B3-208ENST00000567250 CYB561D1Q8N8Q1 229 aa8.84□□□□□ -0.99
SF3B3-208ENST00000567250 IL17DQ8TAD2 202 aa8.84□□□□□ -0.99
SF3B3-208ENST00000567250 NIPSNAP3BQ9BS92 247 aa8.84□□□□□ -0.99
SF3B3-208ENST00000567250 ATG101Q9BSB4 218 aa8.84□□□□□ -0.99
SF3B3-208ENST00000567250 NDFIP1Q9BT67 221 aa8.84□□□□□ -0.99
SF3B3-208ENST00000567250 AGPAT4-IT1Q9H0P7 198 aa8.84□□□□□ -0.99
SF3B3-208ENST00000567250 EDA2RQ9HAV5 297 aa8.84□□□□□ -0.99
SF3B3-208ENST00000567250 ZNF492Q9P255 531 aa8.84□□□□□ -0.99
SF3B3-208ENST00000567250 A0A1B0GV50 99 aa8.83□□□□□ -1
SF3B3-208ENST00000567250 TMEM189A5PLL7 270 aa8.83□□□□□ -1
SF3B3-208ENST00000567250 CRXO43186 299 aaPredicted RBP8.83□□□□□ -1
SF3B3-208ENST00000567250 IFNA1P01562 189 aa8.83□□□□□ -1
SF3B3-208ENST00000567250 IFNA7P01567 189 aa8.83□□□□□ -1
SF3B3-208ENST00000567250 CRISP2P16562 243 aa8.83□□□□□ -1
SF3B3-208ENST00000567250 GNG5P63218 68 aa8.83□□□□□ -1
SF3B3-208ENST00000567250 RRN3P1Q2M238 152 aa8.83□□□□□ -1
SF3B3-208ENST00000567250 GFI1BQ5VTD9 330 aa8.83□□□□□ -1
SF3B3-208ENST00000567250 CST9LP1Q5W188 147 aa8.83□□□□□ -1
SF3B3-208ENST00000567250 HIST1H2BAQ96A08 127 aa8.83□□□□□ -1
SF3B3-208ENST00000567250 VGLL1Q99990 258 aa8.83□□□□□ -1
SF3B3-208ENST00000567250 YTHDF2Q9Y5A9 579 aaKnown RBP8.83□□□□□ -1
SF3B3-208ENST00000567250 X6R8D5 127 aa8.83□□□□□ -1
SF3B3-208ENST00000567250 IGHV4-28A0A0C4DH34 117 aa8.82□□□□□ -1
SF3B3-208ENST00000567250 A0A0J9YWU9 116 aa8.82□□□□□ -1
SF3B3-208ENST00000567250 C7orf71A4D174 169 aa8.82□□□□□ -1
SF3B3-208ENST00000567250 KLLNB2CW77 178 aa8.82□□□□□ -1
SF3B3-208ENST00000567250 H7BYZ3 331 aa8.82□□□□□ -1
SF3B3-208ENST00000567250 J3KRW8 73 aa8.82□□□□□ -1
SF3B3-208ENST00000567250 GPX1P07203 203 aa8.82□□□□□ -1
SF3B3-208ENST00000567250 BLOC1S1P78537 153 aa8.82□□□□□ -1
SF3B3-208ENST00000567250 C1orf158Q8N1D5 194 aa8.82□□□□□ -1
SF3B3-208ENST00000567250 TMEM75Q8N9X5 138 aa8.82□□□□□ -1
SF3B3-208ENST00000567250 Q8NAQ8 132 aa8.82□□□□□ -1
SF3B3-208ENST00000567250 Q8TAT8 98 aa8.82□□□□□ -1
SF3B3-208ENST00000567250 FAM19A4Q96LR4 140 aa8.82□□□□□ -1
SF3B3-208ENST00000567250 EPDR1Q9UM22 224 aa8.82□□□□□ -1
SF3B3-208ENST00000567250 TEX48A0A1B0GUV7 120 aa8.81□□□□□ -1
SF3B3-208ENST00000567250 PEX7O00628 323 aa8.81□□□□□ -1
SF3B3-208ENST00000567250 TAGLN2P37802 199 aaKnown RBP8.81□□□□□ -1
SF3B3-208ENST00000567250 LINC01587Q99440 93 aa8.81□□□□□ -1
SF3B3-208ENST00000567250 TXNDC17Q9BRA2 123 aa8.81□□□□□ -1
SF3B3-208ENST00000567250 TRAV8-1A0A0A6YYK1 113 aa8.8□□□□□ -1
SF3B3-208ENST00000567250 TRAV12-3A0A0B4J271 114 aa8.8□□□□□ -1
SF3B3-208ENST00000567250 PAGE4O60829 102 aa8.8□□□□□ -1
SF3B3-208ENST00000567250 AKR1C3P42330 323 aa8.8□□□□□ -1
SF3B3-208ENST00000567250 TAS2R60P59551 318 aa8.8□□□□□ -1
SF3B3-208ENST00000567250 UBE2G1P62253 170 aa8.8□□□□□ -1
SF3B3-208ENST00000567250 FLI1Q01543 452 aaPredicted RBP8.8□□□□□ -1
SF3B3-208ENST00000567250 BTN1A1Q13410 526 aa8.8□□□□□ -1
SF3B3-208ENST00000567250 ZFAND2AQ8N6M9 145 aa8.8□□□□□ -1
SF3B3-208ENST00000567250 FMC1Q96HJ9 113 aa8.8□□□□□ -1
SF3B3-208ENST00000567250 PYGO2Q9BRQ0 406 aa8.8□□□□□ -1
SF3B3-208ENST00000567250 GNG13Q9P2W3 67 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms