RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 RNASE4P34096 147 aaKnown RBP11.07□□□□□ -0.64
CDH3-205ENST00000566808 GUK1Q16774 197 aa11.07□□□□□ -0.64
CDH3-205ENST00000566808 LINC01620Q4KN68 170 aa11.07□□□□□ -0.64
CDH3-205ENST00000566808 ZNF546Q86UE3 836 aa11.07□□□□□ -0.64
CDH3-205ENST00000566808 SMIM4Q8WVI0 70 aa11.07□□□□□ -0.64
CDH3-205ENST00000566808 ZNF479Q96JC4 524 aa11.07□□□□□ -0.64
CDH3-205ENST00000566808 FAM19A4Q96LR4 140 aa11.07□□□□□ -0.64
CDH3-205ENST00000566808 SCP2D1Q9UJQ7 156 aa11.07□□□□□ -0.64
CDH3-205ENST00000566808 IGHV1OR15-1A0A075B7D0 117 aa11.06□□□□□ -0.64
CDH3-205ENST00000566808 TRAV8-6A0A0B4J262 113 aa11.06□□□□□ -0.64
CDH3-205ENST00000566808 H3BQ15 152 aa11.06□□□□□ -0.64
CDH3-205ENST00000566808 CRISP2P16562 243 aa11.06□□□□□ -0.64
CDH3-205ENST00000566808 RPL37AP61513 92 aaKnown RBP11.06□□□□□ -0.64
CDH3-205ENST00000566808 VBP1P61758 197 aa11.06□□□□□ -0.64
CDH3-205ENST00000566808 ZNF846Q147U1 533 aa11.06□□□□□ -0.64
CDH3-205ENST00000566808 TMEM37Q8WXS4 190 aa11.06□□□□□ -0.64
CDH3-205ENST00000566808 VCX3AQ9NNX9 186 aa11.06□□□□□ -0.64
CDH3-205ENST00000566808 LECT2O14960 151 aa11.05□□□□□ -0.64
CDH3-205ENST00000566808 COX7A2P2O60397 106 aa11.05□□□□□ -0.64
CDH3-205ENST00000566808 GPX1P07203 203 aa11.05□□□□□ -0.64
CDH3-205ENST00000566808 SLC38A11Q08AI6 406 aa11.05□□□□□ -0.64
CDH3-205ENST00000566808 OPCMLQ14982 345 aa11.05□□□□□ -0.64
CDH3-205ENST00000566808 OR10P1Q8NGE3 313 aa11.05□□□□□ -0.64
CDH3-205ENST00000566808 FNDC10F2Z333 226 aa11.04□□□□□ -0.64
CDH3-205ENST00000566808 ZNF253O75346 499 aa11.04□□□□□ -0.64
CDH3-205ENST00000566808 IGLV2-11P01706 119 aa11.04□□□□□ -0.64
CDH3-205ENST00000566808 NMBP08949 121 aa11.04□□□□□ -0.64
CDH3-205ENST00000566808 ERCC8Q13216 396 aa11.04□□□□□ -0.64
CDH3-205ENST00000566808 NHLRC2Q8NBF2 726 aa11.04□□□□□ -0.64
CDH3-205ENST00000566808 LINC00477Q96M19 166 aa11.04□□□□□ -0.64
CDH3-205ENST00000566808 DNAJC4Q9NNZ3 241 aa11.04□□□□□ -0.64
CDH3-205ENST00000566808 RABL2BQ9UNT1 228 aa11.04□□□□□ -0.64
CDH3-205ENST00000566808 GOSR2O14653 212 aa11.03□□□□□ -0.64
CDH3-205ENST00000566808 IGHV3-30P01768 117 aa11.03□□□□□ -0.64
CDH3-205ENST00000566808 IGHV3-33P01772 117 aa11.03□□□□□ -0.64
CDH3-205ENST00000566808 IGHV3-30-3P0DP02 117 aa11.03□□□□□ -0.64
CDH3-205ENST00000566808 IGHV3-30-5P0DP03 117 aa11.03□□□□□ -0.64
CDH3-205ENST00000566808 HNRNPA3P51991 378 aaKnown RBP11.03□□□□□ -0.64
CDH3-205ENST00000566808 RRAS2P62070 204 aaPredicted RBP11.03□□□□□ -0.64
CDH3-205ENST00000566808 OR10J3Q5JRS4 329 aa11.03□□□□□ -0.64
CDH3-205ENST00000566808 NPVFQ9HCQ7 196 aa11.03□□□□□ -0.64
CDH3-205ENST00000566808 LOC100131303A0A0U1RQF7 123 aa11.02□□□□□ -0.65
CDH3-205ENST00000566808 M0R3E3 92 aa11.02□□□□□ -0.65
CDH3-205ENST00000566808 PRR9Q5T870 116 aa11.02□□□□□ -0.65
CDH3-205ENST00000566808 ZFAND2AQ8N6M9 145 aa11.02□□□□□ -0.65
CDH3-205ENST00000566808 RASL10AQ92737 203 aa11.02□□□□□ -0.65
CDH3-205ENST00000566808 FUNDC2Q9BWH2 189 aa11.02□□□□□ -0.65
CDH3-205ENST00000566808 MGAT4CQ9UBM8 478 aa11.02□□□□□ -0.65
CDH3-205ENST00000566808 TRAV4A0A0B4J268 109 aa11.01□□□□□ -0.65
CDH3-205ENST00000566808 ANKRD20A5PA0PJZ0 165 aa11.01□□□□□ -0.65
CDH3-205ENST00000566808 RBFOX3A6NFN3 312 aa11.01□□□□□ -0.65
CDH3-205ENST00000566808 POLR2GP62487 172 aaKnown RBP eCLIP11.01□□□□□ -0.65
CDH3-205ENST00000566808 TMEM128Q5BJH2 165 aa11.01□□□□□ -0.65
CDH3-205ENST00000566808 C10orf113Q5VZT2 155 aa11.01□□□□□ -0.65
CDH3-205ENST00000566808 DAZAP1Q96EP5 407 aaKnown RBP11.01□□□□□ -0.65
CDH3-205ENST00000566808 SRRQ9GZT4 340 aa11.01□□□□□ -0.65
CDH3-205ENST00000566808 AGPAT4-IT1Q9H0P7 198 aa11.01□□□□□ -0.65
CDH3-205ENST00000566808 CCDC59Q9P031 241 aaKnown RBP11.01□□□□□ -0.65
CDH3-205ENST00000566808 PRELID1Q9Y255 219 aa11.01□□□□□ -0.65
CDH3-205ENST00000566808 TRAV8-3A0A0A6YYJ7 113 aa11□□□□□ -0.65
CDH3-205ENST00000566808 VAMP1P23763 118 aa11□□□□□ -0.65
CDH3-205ENST00000566808 ASIPP42127 132 aa11□□□□□ -0.65
CDH3-205ENST00000566808 C9orf47Q6ZRZ4 202 aa11□□□□□ -0.65
CDH3-205ENST00000566808 MCUBQ9NWR8 336 aa11□□□□□ -0.65
CDH3-205ENST00000566808 PSENENQ9NZ42 101 aa11□□□□□ -0.65
CDH3-205ENST00000566808 AGPAT2O15120 278 aa10.99□□□□□ -0.65
CDH3-205ENST00000566808 CTDSPLO15194 276 aa10.99□□□□□ -0.65
CDH3-205ENST00000566808 CCNKO75909 580 aa10.99□□□□□ -0.65
CDH3-205ENST00000566808 Q6ZQT7 251 aa10.99□□□□□ -0.65
CDH3-205ENST00000566808 SPXQ9BT56 116 aa10.99□□□□□ -0.65
CDH3-205ENST00000566808 MIXL1Q9H2W2 232 aa10.99□□□□□ -0.65
CDH3-205ENST00000566808 PFN1P07737 140 aaKnown RBP10.98□□□□□ -0.65
CDH3-205ENST00000566808 TMEM78Q5T7P6 136 aa10.98□□□□□ -0.65
CDH3-205ENST00000566808 LELP1Q5T871 98 aa10.98□□□□□ -0.65
CDH3-205ENST00000566808 TRBV19A0A075B6N1 114 aa10.97□□□□□ -0.65
CDH3-205ENST00000566808 FABP12A6NFH5 140 aa10.97□□□□□ -0.65
CDH3-205ENST00000566808 SSSCA1O60232 199 aa10.97□□□□□ -0.65
CDH3-205ENST00000566808 HOXB5P09067 269 aa10.97□□□□□ -0.65
CDH3-205ENST00000566808 METTL15P1P0C7V9 234 aa10.97□□□□□ -0.65
CDH3-205ENST00000566808 HIST1H1EP10412 219 aaKnown RBP10.97□□□□□ -0.65
CDH3-205ENST00000566808 ID3Q02535 119 aa10.97□□□□□ -0.65
CDH3-205ENST00000566808 TMEM14EPQ6UXP3 125 aa10.97□□□□□ -0.65
CDH3-205ENST00000566808 Q8N976 141 aa10.97□□□□□ -0.65
CDH3-205ENST00000566808 OR4C5Q8NGB2 326 aa10.97□□□□□ -0.65
CDH3-205ENST00000566808 ATP6V0E2Q8NHE4 81 aa10.97□□□□□ -0.65
CDH3-205ENST00000566808 COX11Q9Y6N1 276 aa10.97□□□□□ -0.65
CDH3-205ENST00000566808 IGKV2-40A0A087WW87 121 aaPredicted RBP10.96□□□□□ -0.65
CDH3-205ENST00000566808 A0A087WXM4 84 aa10.96□□□□□ -0.65
CDH3-205ENST00000566808 RGS5O15539 181 aa10.96□□□□□ -0.65
CDH3-205ENST00000566808 IGKV2D-40P01614 121 aaPredicted RBP10.96□□□□□ -0.65
CDH3-205ENST00000566808 PDE6HQ13956 83 aa10.96□□□□□ -0.65
CDH3-205ENST00000566808 TOR2AQ5JU69 321 aa10.96□□□□□ -0.65
CDH3-205ENST00000566808 Q6ZRU5 148 aa10.96□□□□□ -0.65
CDH3-205ENST00000566808 BAALCQ8WXS3 180 aa10.96□□□□□ -0.65
CDH3-205ENST00000566808 SMIM8Q96KF7 97 aa10.96□□□□□ -0.65
CDH3-205ENST00000566808 MGST2Q99735 147 aa10.96□□□□□ -0.65
CDH3-205ENST00000566808 TRGV11A0A075B6L2 103 aa10.95□□□□□ -0.66
CDH3-205ENST00000566808 TRBV7-9A0A0J9YWB2 115 aa10.95□□□□□ -0.66
CDH3-205ENST00000566808 GATA1P15976 413 aaPredicted RBP10.95□□□□□ -0.66
CDH3-205ENST00000566808 IL18Q14116 193 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms