RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 NDUFB4O95168 129 aa10.36□□□□□ -0.75
RNF40-209ENST00000566703 H2AFB2P0C5Z0 115 aa10.36□□□□□ -0.75
RNF40-209ENST00000566703 CRISP2P16562 243 aa10.36□□□□□ -0.75
RNF40-209ENST00000566703 C9orf47Q6ZRZ4 202 aa10.36□□□□□ -0.75
RNF40-209ENST00000566703 Q6ZTI0 123 aa10.36□□□□□ -0.75
RNF40-209ENST00000566703 EIF4E3Q8N5X7 224 aaKnown RBP10.36□□□□□ -0.75
RNF40-209ENST00000566703 C11orf72Q8NBR9 251 aa10.36□□□□□ -0.75
RNF40-209ENST00000566703 TMPRSS5Q9H3S3 457 aa10.36□□□□□ -0.75
RNF40-209ENST00000566703 NUDT15Q9NV35 164 aa10.36□□□□□ -0.75
RNF40-209ENST00000566703 NDUFA13Q9P0J0 144 aa10.36□□□□□ -0.75
RNF40-209ENST00000566703 TRGV2A0A075B6R0 118 aa10.35□□□□□ -0.75
RNF40-209ENST00000566703 UBE2L5PA0A1B0GUS4 154 aa10.35□□□□□ -0.75
RNF40-209ENST00000566703 IGSF23A1L1A6 192 aa10.35□□□□□ -0.75
RNF40-209ENST00000566703 ERCC8Q13216 396 aa10.35□□□□□ -0.75
RNF40-209ENST00000566703 RAB32Q13637 225 aa10.35□□□□□ -0.75
RNF40-209ENST00000566703 VSIG2Q96IQ7 327 aa10.35□□□□□ -0.75
RNF40-209ENST00000566703 CCDC32Q9BV29 185 aa10.35□□□□□ -0.75
RNF40-209ENST00000566703 KRTAP1-5Q9BYS1 174 aa10.35□□□□□ -0.75
RNF40-209ENST00000566703 AAMDCQ9H7C9 122 aa10.35□□□□□ -0.75
RNF40-209ENST00000566703 GSN-AS1Q9NRJ2 163 aa10.35□□□□□ -0.75
RNF40-209ENST00000566703 A0A096LPF7 62 aa10.34□□□□□ -0.75
RNF40-209ENST00000566703 SPINK4O60575 86 aa10.34□□□□□ -0.75
RNF40-209ENST00000566703 FGF7P21781 194 aa10.34□□□□□ -0.75
RNF40-209ENST00000566703 S100A10P60903 97 aa10.34□□□□□ -0.75
RNF40-209ENST00000566703 IBA57Q5T440 356 aaKnown RBP10.34□□□□□ -0.75
RNF40-209ENST00000566703 SPATA12Q7Z6I5 190 aa10.34□□□□□ -0.75
RNF40-209ENST00000566703 FUT9Q9Y231 359 aa10.34□□□□□ -0.75
RNF40-209ENST00000566703 TRGV1A0A0A0MS02 117 aa10.33□□□□□ -0.76
RNF40-209ENST00000566703 GPX1P07203 203 aa10.33□□□□□ -0.76
RNF40-209ENST00000566703 TCL1AP56279 114 aa10.33□□□□□ -0.76
RNF40-209ENST00000566703 CD300CQ08708 224 aa10.33□□□□□ -0.76
RNF40-209ENST00000566703 SLAQ13239 276 aa10.33□□□□□ -0.76
RNF40-209ENST00000566703 MAPKAPK5-AS1Q8N8E1 139 aa10.33□□□□□ -0.76
RNF40-209ENST00000566703 GPN1Q9HCN4 374 aaPredicted RBP10.33□□□□□ -0.76
RNF40-209ENST00000566703 TRBV7-9A0A0J9YWB2 115 aa10.32□□□□□ -0.76
RNF40-209ENST00000566703 FAM240BA0A1B0GVZ2 78 aa10.32□□□□□ -0.76
RNF40-209ENST00000566703 NBEAP1P0C6P0 100 aa10.32□□□□□ -0.76
RNF40-209ENST00000566703 PYYP10082 97 aa10.32□□□□□ -0.76
RNF40-209ENST00000566703 RNASE4P34096 147 aaKnown RBP10.32□□□□□ -0.76
RNF40-209ENST00000566703 BTN1A1Q13410 526 aa10.32□□□□□ -0.76
RNF40-209ENST00000566703 TMEM78Q5T7P6 136 aa10.32□□□□□ -0.76
RNF40-209ENST00000566703 EXOC3-AS1Q8N2X6 119 aa10.32□□□□□ -0.76
RNF40-209ENST00000566703 ZFAND2AQ8N6M9 145 aa10.32□□□□□ -0.76
RNF40-209ENST00000566703 BLNKQ8WV28 456 aa10.32□□□□□ -0.76
RNF40-209ENST00000566703 FAM167A-AS1Q96KT0 104 aa10.32□□□□□ -0.76
RNF40-209ENST00000566703 NPCDR1Q9BY65 106 aa10.32□□□□□ -0.76
RNF40-209ENST00000566703 SLC25A31Q9H0C2 315 aa10.32□□□□□ -0.76
RNF40-209ENST00000566703 ZNF492Q9P255 531 aa10.32□□□□□ -0.76
RNF40-209ENST00000566703 KLF12Q9Y4X4 402 aa10.32□□□□□ -0.76
RNF40-209ENST00000566703 RYR1P21817 5038 aa10.31□□□□□ -0.76
RNF40-209ENST00000566703 ICAM4Q14773 271 aa10.31□□□□□ -0.76
RNF40-209ENST00000566703 MZT2BQ6NZ67 158 aa10.31□□□□□ -0.76
RNF40-209ENST00000566703 LINC00299Q6ZSB3 139 aa10.31□□□□□ -0.76
RNF40-209ENST00000566703 Q8N1X5 172 aa10.31□□□□□ -0.76
RNF40-209ENST00000566703 ST6GAL2Q96JF0 529 aa10.31□□□□□ -0.76
RNF40-209ENST00000566703 SLC25A2Q9BXI2 301 aa10.31□□□□□ -0.76
RNF40-209ENST00000566703 OR51M1Q9H341 326 aa10.31□□□□□ -0.76
RNF40-209ENST00000566703 RGS13O14921 159 aa10.3□□□□□ -0.76
RNF40-209ENST00000566703 SIVA1O15304 175 aa10.3□□□□□ -0.76
RNF40-209ENST00000566703 PAX4O43316 350 aa10.3□□□□□ -0.76
RNF40-209ENST00000566703 NHLH2Q02577 135 aa10.3□□□□□ -0.76
RNF40-209ENST00000566703 GCSAMLQ5JQS6 135 aa10.3□□□□□ -0.76
RNF40-209ENST00000566703 KCNIP2Q9NS61 270 aa10.3□□□□□ -0.76
RNF40-209ENST00000566703 PRO0255Q9UI72 69 aa10.3□□□□□ -0.76
RNF40-209ENST00000566703 ICOSQ9Y6W8 199 aa10.3□□□□□ -0.76
RNF40-209ENST00000566703 IGHV1OR15-1A0A075B7D0 117 aa10.29□□□□□ -0.76
RNF40-209ENST00000566703 E5RGE8 158 aa10.29□□□□□ -0.76
RNF40-209ENST00000566703 ZNF138P52744 262 aa10.29□□□□□ -0.76
RNF40-209ENST00000566703 MIR17HGQ75NE6 70 aa10.29□□□□□ -0.76
RNF40-209ENST00000566703 LYPD1Q8N2G4 141 aa10.29□□□□□ -0.76
RNF40-209ENST00000566703 VGLL1Q99990 258 aa10.29□□□□□ -0.76
RNF40-209ENST00000566703 MRPL32Q9BYC8 188 aaKnown RBP10.29□□□□□ -0.76
RNF40-209ENST00000566703 PGPEP1Q9NXJ5 209 aa10.29□□□□□ -0.76
RNF40-209ENST00000566703 IGKV2-40A0A087WW87 121 aaPredicted RBP10.28□□□□□ -0.76
RNF40-209ENST00000566703 RBAKDNA6NC62 111 aa10.28□□□□□ -0.76
RNF40-209ENST00000566703 IGKV2D-40P01614 121 aaPredicted RBP10.28□□□□□ -0.76
RNF40-209ENST00000566703 LINC00315P59091 139 aa10.28□□□□□ -0.76
RNF40-209ENST00000566703 KRTAP10-2P60368 255 aa10.28□□□□□ -0.76
RNF40-209ENST00000566703 MRPL23Q16540 153 aaKnown RBP10.28□□□□□ -0.76
RNF40-209ENST00000566703 FAM122CQ6P4D5 195 aa10.28□□□□□ -0.76
RNF40-209ENST00000566703 Q6ZRN7 208 aaPredicted RBP10.28□□□□□ -0.76
RNF40-209ENST00000566703 OR5C1Q8NGR4 320 aa10.28□□□□□ -0.76
RNF40-209ENST00000566703 ARPC5LQ9BPX5 153 aa10.28□□□□□ -0.76
RNF40-209ENST00000566703 PAXXQ9BUH6 204 aa10.28□□□□□ -0.76
RNF40-209ENST00000566703 HHLA3Q9XRX5 114 aa10.28□□□□□ -0.76
RNF40-209ENST00000566703 CSN1S1P47710 185 aa10.27□□□□□ -0.77
RNF40-209ENST00000566703 CRYBA4P53673 196 aa10.27□□□□□ -0.77
RNF40-209ENST00000566703 CYCSP99999 105 aaKnown RBP10.27□□□□□ -0.77
RNF40-209ENST00000566703 ZNF415Q09FC8 603 aa10.27□□□□□ -0.77
RNF40-209ENST00000566703 ASAH1Q13510 395 aa10.27□□□□□ -0.77
RNF40-209ENST00000566703 IQCF2Q8IXL9 164 aa10.27□□□□□ -0.77
RNF40-209ENST00000566703 THAP6Q8TBB0 222 aa10.27□□□□□ -0.77
RNF40-209ENST00000566703 FXYD5Q96DB9 178 aa10.27□□□□□ -0.77
RNF40-209ENST00000566703 NMES1Q9C002 83 aa10.27□□□□□ -0.77
RNF40-209ENST00000566703 WDR61Q9GZS3 305 aaKnown RBP10.27□□□□□ -0.77
RNF40-209ENST00000566703 SCRT2Q9NQ03 307 aa10.27□□□□□ -0.77
RNF40-209ENST00000566703 TP53TG3Q9ULZ0 132 aa10.27□□□□□ -0.77
RNF40-209ENST00000566703 LENEPQ9Y5L5 61 aa10.27□□□□□ -0.77
RNF40-209ENST00000566703 C17orf112F2Z3M2 114 aa10.26□□□□□ -0.77
RNF40-209ENST00000566703 NXPH4O95158 308 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms