RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 HLA-DMBP28068 263 aa11.8□□□□□ -0.52
COMMD4-210ENST00000564587 TMEM78Q5T7P6 136 aa11.8□□□□□ -0.52
COMMD4-210ENST00000564587 C9orf47Q6ZRZ4 202 aa11.8□□□□□ -0.52
COMMD4-210ENST00000564587 TSKUQ8WUA8 353 aa11.8□□□□□ -0.52
COMMD4-210ENST00000564587 GFRA4Q9GZZ7 299 aa11.8□□□□□ -0.52
COMMD4-210ENST00000564587 A0A1B0GUS0 222 aa11.79□□□□□ -0.52
COMMD4-210ENST00000564587 ZNF705FA8MVS1 300 aaPredicted RBP11.79□□□□□ -0.52
COMMD4-210ENST00000564587 INAFM1C9JVW0 142 aa11.79□□□□□ -0.52
COMMD4-210ENST00000564587 NPIPB6E9PJ23 425 aa11.79□□□□□ -0.52
COMMD4-210ENST00000564587 IGFL4Q6B9Z1 124 aa11.79□□□□□ -0.52
COMMD4-210ENST00000564587 RNF182Q8N6D2 247 aa11.79□□□□□ -0.52
COMMD4-210ENST00000564587 ZNF738Q8NE65 137 aa11.79□□□□□ -0.52
COMMD4-210ENST00000564587 LINC00477Q96M19 166 aa11.79□□□□□ -0.52
COMMD4-210ENST00000564587 SAV1Q9H4B6 383 aaPredicted RBP11.79□□□□□ -0.52
COMMD4-210ENST00000564587 NAT8BQ9UHF3 227 aa11.79□□□□□ -0.52
COMMD4-210ENST00000564587 RNF114Q9Y508 228 aa11.79□□□□□ -0.52
COMMD4-210ENST00000564587 SVEP1Q4LDE5 3571 aa11.79□□□□□ -0.52
COMMD4-210ENST00000564587 IZUMO1RA6ND01 250 aa11.78□□□□□ -0.52
COMMD4-210ENST00000564587 CRLF1O75462 422 aa11.78□□□□□ -0.52
COMMD4-210ENST00000564587 ZNF138P52744 262 aa11.78□□□□□ -0.52
COMMD4-210ENST00000564587 PAFAH1B2P68402 229 aa11.78□□□□□ -0.52
COMMD4-210ENST00000564587 SMUG1Q53HV7 270 aa11.78□□□□□ -0.52
COMMD4-210ENST00000564587 RASL11AQ6T310 242 aa11.78□□□□□ -0.52
COMMD4-210ENST00000564587 OR10J6PQ8NGY7 276 aa11.78□□□□□ -0.52
COMMD4-210ENST00000564587 ZC2HC1AQ96GY0 325 aa11.78□□□□□ -0.52
COMMD4-210ENST00000564587 VGLL1Q99990 258 aa11.78□□□□□ -0.52
COMMD4-210ENST00000564587 MXRA5Q9NR99 2828 aa11.77□□□□□ -0.53
COMMD4-210ENST00000564587 TRAV2A0A0B4J234 112 aa11.77□□□□□ -0.53
COMMD4-210ENST00000564587 TRBV7-9A0A0J9YWB2 115 aa11.77□□□□□ -0.53
COMMD4-210ENST00000564587 XKRY2A2RUG3 117 aa11.77□□□□□ -0.53
COMMD4-210ENST00000564587 SLURP1P55000 103 aa11.77□□□□□ -0.53
COMMD4-210ENST00000564587 SRSF2Q01130 221 aaKnown RBP11.77□□□□□ -0.53
COMMD4-210ENST00000564587 FAM162BQ5T6X4 162 aa11.77□□□□□ -0.53
COMMD4-210ENST00000564587 WDR73Q6P4I2 378 aa11.77□□□□□ -0.53
COMMD4-210ENST00000564587 OR9G4Q8NGQ1 327 aa11.77□□□□□ -0.53
COMMD4-210ENST00000564587 PRAC2D3DTV9 90 aa11.76□□□□□ -0.53
COMMD4-210ENST00000564587 MT-ND6P03923 174 aa11.76□□□□□ -0.53
COMMD4-210ENST00000564587 CD28P10747 220 aa11.76□□□□□ -0.53
COMMD4-210ENST00000564587 RPS20P60866 119 aaKnown RBP11.76□□□□□ -0.53
COMMD4-210ENST00000564587 SNRPD3P62318 126 aaKnown RBP11.76□□□□□ -0.53
COMMD4-210ENST00000564587 C18orf65Q6ZTR6 163 aa11.76□□□□□ -0.53
COMMD4-210ENST00000564587 DCANP1Q8TF63 244 aa11.76□□□□□ -0.53
COMMD4-210ENST00000564587 ASCL2Q99929 193 aa11.76□□□□□ -0.53
COMMD4-210ENST00000564587 AGPAT4-IT1Q9H0P7 198 aa11.76□□□□□ -0.53
COMMD4-210ENST00000564587 TRGC2P03986 189 aa11.75□□□□□ -0.53
COMMD4-210ENST00000564587 S100A6P06703 90 aa11.75□□□□□ -0.53
COMMD4-210ENST00000564587 PROK1P58294 105 aa11.75□□□□□ -0.53
COMMD4-210ENST00000564587 FHL3Q13643 280 aa11.75□□□□□ -0.53
COMMD4-210ENST00000564587 DEFB136Q30KP8 78 aa11.75□□□□□ -0.53
COMMD4-210ENST00000564587 Q6AWC8 147 aa11.75□□□□□ -0.53
COMMD4-210ENST00000564587 LINC00322Q6ZN03 302 aaPredicted RBP11.75□□□□□ -0.53
COMMD4-210ENST00000564587 ATP5L2Q7Z4Y8 100 aa11.75□□□□□ -0.53
COMMD4-210ENST00000564587 OR2D3Q8NGH3 330 aa11.75□□□□□ -0.53
COMMD4-210ENST00000564587 C8orf49Q96NF6 230 aa11.75□□□□□ -0.53
COMMD4-210ENST00000564587 MS4A6AQ9H2W1 248 aa11.75□□□□□ -0.53
COMMD4-210ENST00000564587 FABP5P3A8MUU1 101 aa11.74□□□□□ -0.53
COMMD4-210ENST00000564587 K7EQG2 157 aa11.74□□□□□ -0.53
COMMD4-210ENST00000564587 HAX1O00165 279 aa11.74□□□□□ -0.53
COMMD4-210ENST00000564587 CCL24O00175 119 aa11.74□□□□□ -0.53
COMMD4-210ENST00000564587 Q71RC1 249 aaPredicted RBP11.74□□□□□ -0.53
COMMD4-210ENST00000564587 C20orf173Q96LM9 149 aa11.74□□□□□ -0.53
COMMD4-210ENST00000564587 CITED2Q99967 270 aaPredicted RBP11.74□□□□□ -0.53
COMMD4-210ENST00000564587 GNB1LQ9BYB4 327 aa11.74□□□□□ -0.53
COMMD4-210ENST00000564587 ZNF469Q96JG9 3925 aaPredicted RBP11.74□□□□□ -0.53
COMMD4-210ENST00000564587 TMEM189A5PLL7 270 aa11.73□□□□□ -0.53
COMMD4-210ENST00000564587 CRIP1P50238 77 aa11.73□□□□□ -0.53
COMMD4-210ENST00000564587 FOXA3P55318 350 aaPredicted RBP11.73□□□□□ -0.53
COMMD4-210ENST00000564587 HIST1H1AQ02539 215 aaPredicted RBP11.73□□□□□ -0.53
COMMD4-210ENST00000564587 ERCC8Q13216 396 aa11.73□□□□□ -0.53
COMMD4-210ENST00000564587 ACTL10Q5JWF8 245 aa11.73□□□□□ -0.53
COMMD4-210ENST00000564587 RBPMS2Q6ZRY4 209 aaKnown RBP11.73□□□□□ -0.53
COMMD4-210ENST00000564587 NUP35Q8NFH5 326 aa11.73□□□□□ -0.53
COMMD4-210ENST00000564587 OR8A1Q8NGG7 326 aa11.73□□□□□ -0.53
COMMD4-210ENST00000564587 DLX4Q92988 240 aaPredicted RBP11.73□□□□□ -0.53
COMMD4-210ENST00000564587 RAX2Q96IS3 184 aa11.73□□□□□ -0.53
COMMD4-210ENST00000564587 NEU1Q99519 415 aa11.73□□□□□ -0.53
COMMD4-210ENST00000564587 SIGLEC8Q9NYZ4 499 aa11.73□□□□□ -0.53
COMMD4-210ENST00000564587 TRAPPC1Q9Y5R8 145 aa11.73□□□□□ -0.53
COMMD4-210ENST00000564587 IGKV3-7A0A075B6H7 116 aa11.72□□□□□ -0.53
COMMD4-210ENST00000564587 TRAV25A0A0B4J276 109 aa11.72□□□□□ -0.53
COMMD4-210ENST00000564587 HIGD1CA8MV81 97 aa11.72□□□□□ -0.53
COMMD4-210ENST00000564587 SH2D1AO60880 128 aa11.72□□□□□ -0.53
COMMD4-210ENST00000564587 CA1P00915 261 aaPredicted RBP11.72□□□□□ -0.53
COMMD4-210ENST00000564587 CSN3P07498 182 aa11.72□□□□□ -0.53
COMMD4-210ENST00000564587 TCL1AP56279 114 aa11.72□□□□□ -0.53
COMMD4-210ENST00000564587 ZFP82Q8N141 532 aa11.72□□□□□ -0.53
COMMD4-210ENST00000564587 Q8TAT8 98 aa11.72□□□□□ -0.53
COMMD4-210ENST00000564587 DYNLRB2Q8TF09 96 aa11.72□□□□□ -0.53
COMMD4-210ENST00000564587 LOC105371267A0A1B0GV96 52 aa11.71□□□□□ -0.53
COMMD4-210ENST00000564587 HLA-DQA1P01909 254 aa11.71□□□□□ -0.53
COMMD4-210ENST00000564587 EDN2P20800 178 aa11.71□□□□□ -0.53
COMMD4-210ENST00000564587 WFDC3Q8IUB2 231 aa11.71□□□□□ -0.53
COMMD4-210ENST00000564587 A0A1B0GW15 77 aa11.7□□□□□ -0.54
COMMD4-210ENST00000564587 PHOX2AO14813 284 aa11.7□□□□□ -0.54
COMMD4-210ENST00000564587 S100A8P05109 93 aa11.7□□□□□ -0.54
COMMD4-210ENST00000564587 ADAMTSL5Q6ZMM2 481 aa11.7□□□□□ -0.54
COMMD4-210ENST00000564587 NDUFA11Q86Y39 141 aa11.7□□□□□ -0.54
COMMD4-210ENST00000564587 FRZBQ92765 325 aa11.7□□□□□ -0.54
COMMD4-210ENST00000564587 BORCS7Q96B45 105 aa11.7□□□□□ -0.54
COMMD4-210ENST00000564587 ODF3Q96PU9 254 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms