RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 FBN2P35556 2912 aa0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 N4BP2Q86UW6 1770 aaPredicted RBP0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 CCDC160A6NGH7 325 aa0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 UQCRQO14949 82 aa0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 CCL25O15444 150 aa0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 TRACP01848 142 aa0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 LYNX1P0DP58 116 aa0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 FABP2P12104 132 aa0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 TPT1P13693 172 aaKnown RBP0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 CIRBPQ14011 172 aaKnown RBP0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 OR8B8Q15620 311 aa0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 VMA21Q3ZAQ7 101 aa0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 CCDC153Q494R4 210 aa0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 FOXI2Q6ZQN5 318 aa0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 LINC00299Q6ZSB3 139 aa0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 OR8I2Q8N0Y5 310 aa0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 PLPP5Q8NEB5 264 aa0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 OR4S1Q8NGB4 309 aa0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 OR5H6Q8NGV6 325 aa0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 GRPEL2Q8TAA5 225 aa0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 MAGOHBQ96A72 148 aaKnown RBP0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 ZC2HC1AQ96GY0 325 aa0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 OR4C12Q96R67 309 aa0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 BATF3Q9NR55 127 aa0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 CDC42SE1Q9NRR8 79 aa0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 MPC1Q9Y5U8 109 aa0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 MYO5AQ9Y4I1 1855 aaKnown RBP0.56□□□□□ -2.32
HMGB1P33-201ENST00000563485 FHAD1B1AJZ9 1412 aa0.55□□□□□ -2.32
HMGB1P33-201ENST00000563485 MUC5BQ9HC84 5762 aaPredicted RBP0.55□□□□□ -2.32
HMGB1P33-201ENST00000563485 FANCMQ8IYD8 2048 aa0.55□□□□□ -2.32
HMGB1P33-201ENST00000563485 NCOA6Q14686 2063 aaPredicted RBP0.55□□□□□ -2.32
HMGB1P33-201ENST00000563485 DLC1Q96QB1 1528 aa0.55□□□□□ -2.32
HMGB1P33-201ENST00000563485 TRBV6-7A0A0A0MS04 114 aa0.55□□□□□ -2.32
HMGB1P33-201ENST00000563485 TMEM189A5PLL7 270 aa0.55□□□□□ -2.32
HMGB1P33-201ENST00000563485 F8W1H4 67 aa0.55□□□□□ -2.32
HMGB1P33-201ENST00000563485 H3BRM9 83 aa0.55□□□□□ -2.32
HMGB1P33-201ENST00000563485 DPM2O94777 84 aa0.55□□□□□ -2.32
HMGB1P33-201ENST00000563485 IGHV3-30P01768 117 aa0.55□□□□□ -2.32
HMGB1P33-201ENST00000563485 IGHV3-30-5P0DP03 117 aa0.55□□□□□ -2.32
HMGB1P33-201ENST00000563485 CRYGSP22914 178 aa0.55□□□□□ -2.32
HMGB1P33-201ENST00000563485 FOXA3P55318 350 aaPredicted RBP0.55□□□□□ -2.32
HMGB1P33-201ENST00000563485 PRB3Q04118 309 aaPredicted RBP0.55□□□□□ -2.32
HMGB1P33-201ENST00000563485 MIR22HGQ0VDD5 57 aa0.55□□□□□ -2.32
HMGB1P33-201ENST00000563485 GLIPR1L1Q6UWM5 242 aa0.55□□□□□ -2.32
HMGB1P33-201ENST00000563485 TEN1Q86WV5 123 aa0.55□□□□□ -2.32
HMGB1P33-201ENST00000563485 TAS2R7Q9NYW3 318 aa0.55□□□□□ -2.32
HMGB1P33-201ENST00000563485 TMEM14CQ9P0S9 112 aa0.55□□□□□ -2.32
HMGB1P33-201ENST00000563485 TRAPPC2LQ9UL33 140 aa0.55□□□□□ -2.32
HMGB1P33-201ENST00000563485 ZFP30Q9Y2G7 519 aa0.55□□□□□ -2.32
HMGB1P33-201ENST00000563485 DLG5Q8TDM6 1919 aa0.55□□□□□ -2.32
HMGB1P33-201ENST00000563485 TANC2Q9HCD6 1990 aa0.55□□□□□ -2.32
HMGB1P33-201ENST00000563485 NINQ8N4C6 2090 aa0.55□□□□□ -2.32
HMGB1P33-201ENST00000563485 ERBINQ96RT1 1412 aa0.55□□□□□ -2.32
HMGB1P33-201ENST00000563485 MED12Q93074 2177 aa0.55□□□□□ -2.32
HMGB1P33-201ENST00000563485 SIP14410 1827 aa0.54□□□□□ -2.32
HMGB1P33-201ENST00000563485 COL1A1P02452 1464 aaPredicted RBP0.54□□□□□ -2.32
HMGB1P33-201ENST00000563485 PTPRFP10586 1907 aa0.54□□□□□ -2.32
HMGB1P33-201ENST00000563485 ROS1P08922 2347 aa0.54□□□□□ -2.32
HMGB1P33-201ENST00000563485 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.54□□□□□ -2.32
HMGB1P33-201ENST00000563485 LOC107986453A0A1B0GWG9 222 aa0.54□□□□□ -2.32
HMGB1P33-201ENST00000563485 IFITM5A6NNB3 132 aa0.54□□□□□ -2.32
HMGB1P33-201ENST00000563485 ZNF727A8MUV8 499 aa0.54□□□□□ -2.32
HMGB1P33-201ENST00000563485 C9JAW5 83 aa0.54□□□□□ -2.32
HMGB1P33-201ENST00000563485 C5orf67F2Z3F1 127 aa0.54□□□□□ -2.32
HMGB1P33-201ENST00000563485 TNFSF15O95150 251 aa0.54□□□□□ -2.32
HMGB1P33-201ENST00000563485 HBDP02042 147 aa0.54□□□□□ -2.32
HMGB1P33-201ENST00000563485 MT-ND6P03923 174 aa0.54□□□□□ -2.32
HMGB1P33-201ENST00000563485 DNAJB13P59910 316 aa0.54□□□□□ -2.32
HMGB1P33-201ENST00000563485 TCTE3Q8IZS6 198 aa0.54□□□□□ -2.32
HMGB1P33-201ENST00000563485 OR51A4Q8NGJ6 313 aa0.54□□□□□ -2.32
HMGB1P33-201ENST00000563485 OR5AK2Q8NH90 309 aa0.54□□□□□ -2.32
HMGB1P33-201ENST00000563485 CLEC2BQ92478 149 aa0.54□□□□□ -2.32
HMGB1P33-201ENST00000563485 OBSCN-AS1Q96MR7 158 aa0.54□□□□□ -2.32
HMGB1P33-201ENST00000563485 ODF3Q96PU9 254 aa0.54□□□□□ -2.32
HMGB1P33-201ENST00000563485 CIB3Q96Q77 187 aaPredicted RBP0.54□□□□□ -2.32
HMGB1P33-201ENST00000563485 NABP2Q9BQ15 211 aa0.54□□□□□ -2.32
HMGB1P33-201ENST00000563485 GGACTQ9BVM4 153 aa0.54□□□□□ -2.32
HMGB1P33-201ENST00000563485 HIGD1AQ9Y241 93 aa0.54□□□□□ -2.32
HMGB1P33-201ENST00000563485 DSPPQ9NZW4 1301 aa0.54□□□□□ -2.32
HMGB1P33-201ENST00000563485 UHRF1BP1LA0JNW5 1464 aa0.54□□□□□ -2.32
HMGB1P33-201ENST00000563485 ZFC3H1O60293 1989 aaKnown RBP0.54□□□□□ -2.32
HMGB1P33-201ENST00000563485 SNRNP200O75643 2136 aaKnown RBP0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 SPAG17Q6Q759 2223 aa0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 USP54Q70EL1 1684 aa0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 CEP152O94986 1710 aa0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 CNTRLQ7Z7A1 2325 aa0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 AHNAKQ09666 5890 aaKnown RBP0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 PNMA8CA0A1B0GUJ8 204 aa0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 C9orf170A2RU37 121 aa0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 JMJD7-PLA2G4BH0Y9G9 81 aa0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 OR2H2O95918 312 aa0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 CD2P06729 351 aa0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 TSPAN19P0C672 248 aa0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 SLC25A4P12235 298 aa0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 ZNF25P17030 456 aaPredicted RBP0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 PDE6GP18545 87 aa0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 ETV6P41212 452 aa0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 PSPHP78330 225 aa0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 S100A12P80511 92 aa0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 DIAPH2-AS1Q14236 149 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms