RNA–Protein interactions for RNA: ENST00000563396.1

SMPD3-204, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-204ENST00000563396 OR51M1Q9H341 326 aa9.89□□□□□ -0.83
SMPD3-204ENST00000563396 C7orf71A4D174 169 aa9.88□□□□□ -0.83
SMPD3-204ENST00000563396 NMBP08949 121 aa9.88□□□□□ -0.83
SMPD3-204ENST00000563396 FCN2Q15485 313 aa9.88□□□□□ -0.83
SMPD3-204ENST00000563396 LINC00336Q6ZUF6 198 aa9.88□□□□□ -0.83
SMPD3-204ENST00000563396 PAXXQ9BUH6 204 aa9.88□□□□□ -0.83
SMPD3-204ENST00000563396 AGPAT4-IT1Q9H0P7 198 aa9.88□□□□□ -0.83
SMPD3-204ENST00000563396 NOP10Q9NPE3 64 aaKnown RBP9.88□□□□□ -0.83
SMPD3-204ENST00000563396 ALG5Q9Y673 324 aa9.88□□□□□ -0.83
SMPD3-204ENST00000563396 TRAV12-3A0A0B4J271 114 aa9.87□□□□□ -0.83
SMPD3-204ENST00000563396 TRBV7-9A0A0J9YWB2 115 aa9.87□□□□□ -0.83
SMPD3-204ENST00000563396 HTN1P15515 57 aa9.87□□□□□ -0.83
SMPD3-204ENST00000563396 FAM3BP58499 235 aaPredicted RBP9.87□□□□□ -0.83
SMPD3-204ENST00000563396 DAZ2Q13117 558 aaKnown RBP9.87□□□□□ -0.83
SMPD3-204ENST00000563396 ERCC8Q13216 396 aa9.87□□□□□ -0.83
SMPD3-204ENST00000563396 ICAM4Q14773 271 aa9.87□□□□□ -0.83
SMPD3-204ENST00000563396 FFAR4Q5NUL3 377 aa9.87□□□□□ -0.83
SMPD3-204ENST00000563396 Q6ZR54 194 aa9.87□□□□□ -0.83
SMPD3-204ENST00000563396 UBE2DNLQ8IWF7 75 aa9.87□□□□□ -0.83
SMPD3-204ENST00000563396 CCDC28AQ8IWP9 274 aa9.87□□□□□ -0.83
SMPD3-204ENST00000563396 LYPD1Q8N2G4 141 aa9.87□□□□□ -0.83
SMPD3-204ENST00000563396 ZFAND2AQ8N6M9 145 aa9.87□□□□□ -0.83
SMPD3-204ENST00000563396 RNF141Q8WVD5 230 aa9.87□□□□□ -0.83
SMPD3-204ENST00000563396 IGKV2-40A0A087WW87 121 aaPredicted RBP9.86□□□□□ -0.83
SMPD3-204ENST00000563396 OR7C2O60412 319 aa9.86□□□□□ -0.83
SMPD3-204ENST00000563396 ZNF324O75467 553 aaPredicted RBP9.86□□□□□ -0.83
SMPD3-204ENST00000563396 IFNA5P01569 189 aa9.86□□□□□ -0.83
SMPD3-204ENST00000563396 IGKV2D-40P01614 121 aaPredicted RBP9.86□□□□□ -0.83
SMPD3-204ENST00000563396 OR10J4P0C629 311 aa9.86□□□□□ -0.83
SMPD3-204ENST00000563396 UBE2L3P68036 154 aaKnown RBP9.86□□□□□ -0.83
SMPD3-204ENST00000563396 BTN1A1Q13410 526 aa9.86□□□□□ -0.83
SMPD3-204ENST00000563396 ANXA2RQ3ZCQ2 193 aa9.86□□□□□ -0.83
SMPD3-204ENST00000563396 KHDC3LQ587J8 217 aa9.86□□□□□ -0.83
SMPD3-204ENST00000563396 FAM122CQ6P4D5 195 aa9.86□□□□□ -0.83
SMPD3-204ENST00000563396 C11orf72Q8NBR9 251 aa9.86□□□□□ -0.83
SMPD3-204ENST00000563396 ZNF680Q8NEM1 530 aa9.86□□□□□ -0.83
SMPD3-204ENST00000563396 SMIM3Q9BZL3 60 aa9.86□□□□□ -0.83
SMPD3-204ENST00000563396 ZNF492Q9P255 531 aa9.86□□□□□ -0.83
SMPD3-204ENST00000563396 RBAKDNA6NC62 111 aa9.85□□□□□ -0.83
SMPD3-204ENST00000563396 SNURFLB1AK76 121 aa9.85□□□□□ -0.83
SMPD3-204ENST00000563396 F5H768 121 aa9.85□□□□□ -0.83
SMPD3-204ENST00000563396 J3KRW8 73 aa9.85□□□□□ -0.83
SMPD3-204ENST00000563396 CD300CQ08708 224 aa9.85□□□□□ -0.83
SMPD3-204ENST00000563396 TMEM78Q5T7P6 136 aa9.85□□□□□ -0.83
SMPD3-204ENST00000563396 PRR9Q5T870 116 aa9.85□□□□□ -0.83
SMPD3-204ENST00000563396 C18orf15Q96N68 181 aa9.85□□□□□ -0.83
SMPD3-204ENST00000563396 WFDC1Q9HC57 220 aa9.85□□□□□ -0.83
SMPD3-204ENST00000563396 A0A1B0GVY2 172 aa9.84□□□□□ -0.83
SMPD3-204ENST00000563396 RTL8CO15255 209 aa9.84□□□□□ -0.83
SMPD3-204ENST00000563396 TAS2R45P59539 299 aa9.84□□□□□ -0.83
SMPD3-204ENST00000563396 IBA57Q5T440 356 aaKnown RBP9.84□□□□□ -0.83
SMPD3-204ENST00000563396 EIF4E3Q8N5X7 224 aaKnown RBP9.84□□□□□ -0.83
SMPD3-204ENST00000563396 SCGB1C1Q8TD33 95 aa9.84□□□□□ -0.83
SMPD3-204ENST00000563396 VGLL1Q99990 258 aa9.84□□□□□ -0.83
SMPD3-204ENST00000563396 Q9H3A6 140 aa9.84□□□□□ -0.83
SMPD3-204ENST00000563396 M6PRP20645 277 aa9.83□□□□□ -0.84
SMPD3-204ENST00000563396 ZNF138P52744 262 aa9.83□□□□□ -0.84
SMPD3-204ENST00000563396 ASB13Q8WXK3 278 aa9.83□□□□□ -0.84
SMPD3-204ENST00000563396 AQP10Q96PS8 301 aa9.83□□□□□ -0.84
SMPD3-204ENST00000563396 LENEPQ9Y5L5 61 aa9.83□□□□□ -0.84
SMPD3-204ENST00000563396 PKD1P98161 4303 aa9.83□□□□□ -0.84
SMPD3-204ENST00000563396 PKHD1P08F94 4074 aa9.82□□□□□ -0.84
SMPD3-204ENST00000563396 H3BNG1 76 aa9.82□□□□□ -0.84
SMPD3-204ENST00000563396 HOXA5P20719 270 aa9.82□□□□□ -0.84
SMPD3-204ENST00000563396 TCL1AP56279 114 aa9.82□□□□□ -0.84
SMPD3-204ENST00000563396 ZNF266Q14584 549 aa9.82□□□□□ -0.84
SMPD3-204ENST00000563396 PQLC2Q6ZP29 291 aa9.82□□□□□ -0.84
SMPD3-204ENST00000563396 ARL6IP6Q8N6S5 226 aa9.82□□□□□ -0.84
SMPD3-204ENST00000563396 OR2G3Q8NGZ4 309 aa9.82□□□□□ -0.84
SMPD3-204ENST00000563396 ZNRF2Q8NHG8 242 aa9.82□□□□□ -0.84
SMPD3-204ENST00000563396 Q8TAT8 98 aa9.82□□□□□ -0.84
SMPD3-204ENST00000563396 IGLV2-18A0A075B6J9 118 aa9.81□□□□□ -0.84
SMPD3-204ENST00000563396 GAGE12BA1L429 117 aa9.81□□□□□ -0.84
SMPD3-204ENST00000563396 M0R2N4 97 aa9.81□□□□□ -0.84
SMPD3-204ENST00000563396 GAGE7O76087 117 aa9.81□□□□□ -0.84
SMPD3-204ENST00000563396 GPX1P07203 203 aa9.81□□□□□ -0.84
SMPD3-204ENST00000563396 GIPP09681 153 aaPredicted RBP9.81□□□□□ -0.84
SMPD3-204ENST00000563396 GAGE12FP0CL80 117 aa9.81□□□□□ -0.84
SMPD3-204ENST00000563396 GAGE12GP0CL81 117 aa9.81□□□□□ -0.84
SMPD3-204ENST00000563396 GAGE12IP0CL82 117 aa9.81□□□□□ -0.84
SMPD3-204ENST00000563396 CSN1S1P47710 185 aa9.81□□□□□ -0.84
SMPD3-204ENST00000563396 RANP62826 216 aaKnown RBP9.81□□□□□ -0.84
SMPD3-204ENST00000563396 ACOT6Q3I5F7 207 aaPredicted RBP9.81□□□□□ -0.84
SMPD3-204ENST00000563396 Q6ZTI0 123 aa9.81□□□□□ -0.84
SMPD3-204ENST00000563396 TMED6Q8WW62 240 aa9.81□□□□□ -0.84
SMPD3-204ENST00000563396 PSMG3Q9BT73 122 aaPredicted RBP9.81□□□□□ -0.84
SMPD3-204ENST00000563396 MED28Q9H204 178 aa9.81□□□□□ -0.84
SMPD3-204ENST00000563396 HERC2O95714 4834 aa9.81□□□□□ -0.84
SMPD3-204ENST00000563396 DIRC3C9JPN6 131 aa9.8□□□□□ -0.84
SMPD3-204ENST00000563396 SPINK4O60575 86 aa9.8□□□□□ -0.84
SMPD3-204ENST00000563396 NUDT3O95989 172 aa9.8□□□□□ -0.84
SMPD3-204ENST00000563396 RNASE4P34096 147 aaKnown RBP9.8□□□□□ -0.84
SMPD3-204ENST00000563396 RAB2AP61019 212 aa9.8□□□□□ -0.84
SMPD3-204ENST00000563396 RXFP4Q8TDU9 374 aa9.8□□□□□ -0.84
SMPD3-204ENST00000563396 ATG101Q9BSB4 218 aa9.8□□□□□ -0.84
SMPD3-204ENST00000563396 TMPRSS5Q9H3S3 457 aa9.8□□□□□ -0.84
SMPD3-204ENST00000563396 OTORQ9NRC9 128 aa9.8□□□□□ -0.84
SMPD3-204ENST00000563396 GSN-AS1Q9NRJ2 163 aa9.8□□□□□ -0.84
SMPD3-204ENST00000563396 IGHV1OR15-1A0A075B7D0 117 aa9.79□□□□□ -0.84
SMPD3-204ENST00000563396 TRAV26-1A0A087WT03 109 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms