RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 UBE2D3P61077 147 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 UBE2D2P62837 147 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 CCL8P80075 99 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 DAZ2Q13117 558 aaKnown RBP3.39□□□□□ -1.87
CHD9-206ENST00000562791 RSPO1Q2MKA7 263 aaPredicted RBP3.39□□□□□ -1.87
CHD9-206ENST00000562791 SP6Q3SY56 376 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 TMEM170BQ5T4T1 132 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 LGALS9CQ6DKI2 356 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 C6orf201Q7Z4U5 140 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 DAZ4Q86SG3 579 aaKnown RBP3.39□□□□□ -1.87
CHD9-206ENST00000562791 HMGN2P46Q86SG4 172 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 RNF182Q8N6D2 247 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 FAM3DQ96BQ1 224 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 GPX7Q96SL4 187 aaPredicted RBP3.39□□□□□ -1.87
CHD9-206ENST00000562791 PLA2G12AQ9BZM1 189 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 GLIPR2Q9H4G4 154 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 DPH3P1Q9H4G8 78 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 ZNF286AQ9HBT8 521 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 DAZ3Q9NR90 486 aaKnown RBP3.39□□□□□ -1.87
CHD9-206ENST00000562791 TP73-AS1Q9UF72 201 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 AMMECR1Q9Y4X0 333 aaPredicted RBP3.39□□□□□ -1.87
CHD9-206ENST00000562791 SELENOKQ9Y6D0 94 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 KIAA1671Q9BY89 1806 aa3.38□□□□□ -1.87
CHD9-206ENST00000562791 CTXND1A0A1B0GTU2 59 aa3.38□□□□□ -1.87
CHD9-206ENST00000562791 LYRM9A8MSI8 78 aa3.38□□□□□ -1.87
CHD9-206ENST00000562791 PPYP01298 95 aa3.38□□□□□ -1.87
CHD9-206ENST00000562791 CXCL8P10145 99 aa3.38□□□□□ -1.87
CHD9-206ENST00000562791 CD59P13987 128 aa3.38□□□□□ -1.87
CHD9-206ENST00000562791 GCHFRP30047 84 aa3.38□□□□□ -1.87
CHD9-206ENST00000562791 FXYD6P3P58550 94 aa3.38□□□□□ -1.87
CHD9-206ENST00000562791 FKBP1AP62942 108 aaKnown RBP3.38□□□□□ -1.87
CHD9-206ENST00000562791 UBE2L3P68036 154 aaKnown RBP3.38□□□□□ -1.87
CHD9-206ENST00000562791 ERCC8Q13216 396 aa3.38□□□□□ -1.87
CHD9-206ENST00000562791 MLF2Q15773 248 aaPredicted RBP3.38□□□□□ -1.87
CHD9-206ENST00000562791 ZNF726P1Q15940 193 aa3.38□□□□□ -1.87
CHD9-206ENST00000562791 C15orf32Q32M92 178 aa3.38□□□□□ -1.87
CHD9-206ENST00000562791 HIGD2BQ4VC39 106 aa3.38□□□□□ -1.87
CHD9-206ENST00000562791 DEFB121Q5J5C9 76 aa3.38□□□□□ -1.87
CHD9-206ENST00000562791 PCP2Q8IVA1 136 aa3.38□□□□□ -1.87
CHD9-206ENST00000562791 TMEM252Q8N6L7 170 aa3.38□□□□□ -1.87
CHD9-206ENST00000562791 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.38□□□□□ -1.87
CHD9-206ENST00000562791 BRK1Q8WUW1 75 aa3.38□□□□□ -1.87
CHD9-206ENST00000562791 DSCR8Q96T75 97 aa3.38□□□□□ -1.87
CHD9-206ENST00000562791 UPK3BQ9BT76 320 aa3.38□□□□□ -1.87
CHD9-206ENST00000562791 SLC25A2Q9BXI2 301 aa3.38□□□□□ -1.87
CHD9-206ENST00000562791 OSTCQ9NRP0 149 aa3.38□□□□□ -1.87
CHD9-206ENST00000562791 NHP2Q9NX24 153 aaKnown RBP3.38□□□□□ -1.87
CHD9-206ENST00000562791 HHLA3Q9XRX5 114 aa3.38□□□□□ -1.87
CHD9-206ENST00000562791 F11RQ9Y624 299 aaKnown RBP3.38□□□□□ -1.87
CHD9-206ENST00000562791 RALGAPA2Q2PPJ7 1873 aa3.38□□□□□ -1.87
CHD9-206ENST00000562791 COL11A1P12107 1806 aaPredicted RBP3.37□□□□□ -1.87
CHD9-206ENST00000562791 OBSL1O75147 1896 aa3.37□□□□□ -1.87
CHD9-206ENST00000562791 TRAV8-1A0A0A6YYK1 113 aa3.37□□□□□ -1.87
CHD9-206ENST00000562791 PIGBOS1A0A0B4J2F0 54 aa3.37□□□□□ -1.87
CHD9-206ENST00000562791 hADV29S1A0JD25 119 aa3.37□□□□□ -1.87
CHD9-206ENST00000562791 PLAC8L1A1L4L8 177 aa3.37□□□□□ -1.87
CHD9-206ENST00000562791 CRYM-AS1A6NIL9 109 aa3.37□□□□□ -1.87
CHD9-206ENST00000562791 KLLNB2CW77 178 aa3.37□□□□□ -1.87
CHD9-206ENST00000562791 NPYP01303 97 aa3.37□□□□□ -1.87
CHD9-206ENST00000562791 IL4P05112 153 aa3.37□□□□□ -1.87
CHD9-206ENST00000562791 CCL1P22362 96 aa3.37□□□□□ -1.87
CHD9-206ENST00000562791 AQP1P29972 269 aa3.37□□□□□ -1.87
CHD9-206ENST00000562791 ATP5EP56381 51 aaPredicted RBP3.37□□□□□ -1.87
CHD9-206ENST00000562791 FHL5Q5TD97 284 aa3.37□□□□□ -1.87
CHD9-206ENST00000562791 ATP5L2Q7Z4Y8 100 aa3.37□□□□□ -1.87
CHD9-206ENST00000562791 C5orf38Q86SI9 138 aa3.37□□□□□ -1.87
CHD9-206ENST00000562791 SERP2Q8N6R1 65 aa3.37□□□□□ -1.87
CHD9-206ENST00000562791 RFESDQ8TAC1 157 aa3.37□□□□□ -1.87
CHD9-206ENST00000562791 KLK6Q92876 244 aa3.37□□□□□ -1.87
CHD9-206ENST00000562791 TRGV9Q99603 122 aa3.37□□□□□ -1.87
CHD9-206ENST00000562791 CHAC1Q9BUX1 264 aa3.37□□□□□ -1.87
CHD9-206ENST00000562791 CXCL16Q9H2A7 254 aa3.37□□□□□ -1.87
CHD9-206ENST00000562791 LINC00527Q9UJ94 153 aa3.37□□□□□ -1.87
CHD9-206ENST00000562791 NOTCH2Q04721 2471 aa3.37□□□□□ -1.87
CHD9-206ENST00000562791 BRWD3Q6RI45 1802 aa3.37□□□□□ -1.87
CHD9-206ENST00000562791 ZNF236Q9UL36 1845 aa3.37□□□□□ -1.87
CHD9-206ENST00000562791 NHSQ6T4R5 1651 aa3.36□□□□□ -1.87
CHD9-206ENST00000562791 IGHV3OR15-7A0A075B7D8 119 aa3.36□□□□□ -1.87
CHD9-206ENST00000562791 IGHV4-30-2A0A087WSY4 118 aa3.36□□□□□ -1.87
CHD9-206ENST00000562791 IGHV1-58A0A0C4DH39 117 aa3.36□□□□□ -1.87
CHD9-206ENST00000562791 MYMXA0A1B0GTQ4 84 aa3.36□□□□□ -1.87
CHD9-206ENST00000562791 PGPA6NDG6 321 aa3.36□□□□□ -1.87
CHD9-206ENST00000562791 SMKR1H3BMG3 65 aa3.36□□□□□ -1.87
CHD9-206ENST00000562791 LGALS9O00182 355 aa3.36□□□□□ -1.87
CHD9-206ENST00000562791 UPK2O00526 184 aa3.36□□□□□ -1.87
CHD9-206ENST00000562791 SYNGR2O43760 224 aa3.36□□□□□ -1.87
CHD9-206ENST00000562791 SS18L1O75177 396 aaPredicted RBP3.36□□□□□ -1.87
CHD9-206ENST00000562791 EFNA4P52798 201 aa3.36□□□□□ -1.87
CHD9-206ENST00000562791 C1orf140Q5VVS0 124 aa3.36□□□□□ -1.87
CHD9-206ENST00000562791 LINC00305Q7Z4B0 112 aa3.36□□□□□ -1.87
CHD9-206ENST00000562791 LINC00643Q86TS7 51 aa3.36□□□□□ -1.87
CHD9-206ENST00000562791 PDPNQ86YL7 162 aa3.36□□□□□ -1.87
CHD9-206ENST00000562791 SLC22A24Q8N4F4 322 aa3.36□□□□□ -1.87
CHD9-206ENST00000562791 WFDC11Q8NEX6 87 aa3.36□□□□□ -1.87
CHD9-206ENST00000562791 OR5C1Q8NGR4 320 aa3.36□□□□□ -1.87
CHD9-206ENST00000562791 NT5CQ8TCD5 201 aa3.36□□□□□ -1.87
CHD9-206ENST00000562791 ZNF799Q96GE5 643 aa3.36□□□□□ -1.87
CHD9-206ENST00000562791 C1orf147Q96MC9 270 aaPredicted RBP3.36□□□□□ -1.87
CHD9-206ENST00000562791 NMNAT3Q96T66 252 aa3.36□□□□□ -1.87
CHD9-206ENST00000562791 TM2D3Q9BRN9 247 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms