RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 GOLT1BQ9Y3E0 138 aa11.91□□□□□ -0.5
USB1-206ENST00000562534 ARL2-SNX15V9GYD0 113 aa11.91□□□□□ -0.5
USB1-206ENST00000562534 IGKV2-40A0A087WW87 121 aaPredicted RBP11.9□□□□□ -0.5
USB1-206ENST00000562534 TRBV7-9A0A0J9YWB2 115 aa11.9□□□□□ -0.5
USB1-206ENST00000562534 FAM74A7A6NL05 159 aa11.9□□□□□ -0.5
USB1-206ENST00000562534 ZNF705EA8MWA4 302 aaPredicted RBP11.9□□□□□ -0.5
USB1-206ENST00000562534 IGKV2D-40P01614 121 aaPredicted RBP11.9□□□□□ -0.5
USB1-206ENST00000562534 NMBP08949 121 aa11.9□□□□□ -0.5
USB1-206ENST00000562534 ZNF138P52744 262 aa11.9□□□□□ -0.5
USB1-206ENST00000562534 UBE2G2P60604 165 aa11.9□□□□□ -0.5
USB1-206ENST00000562534 ALKAL2Q6UX46 152 aa11.9□□□□□ -0.5
USB1-206ENST00000562534 ZNF492Q9P255 531 aa11.9□□□□□ -0.5
USB1-206ENST00000562534 LENEPQ9Y5L5 61 aa11.9□□□□□ -0.5
USB1-206ENST00000562534 SMIM9A6NGZ8 99 aa11.89□□□□□ -0.51
USB1-206ENST00000562534 CRXO43186 299 aaPredicted RBP11.89□□□□□ -0.51
USB1-206ENST00000562534 IFNA7P01567 189 aa11.89□□□□□ -0.51
USB1-206ENST00000562534 TCRAP04437 139 aa11.89□□□□□ -0.51
USB1-206ENST00000562534 BLOC1S1P78537 153 aa11.89□□□□□ -0.51
USB1-206ENST00000562534 ZNF705AQ6ZN79 300 aaPredicted RBP11.89□□□□□ -0.51
USB1-206ENST00000562534 NEU1Q99519 415 aa11.89□□□□□ -0.51
USB1-206ENST00000562534 C20orf144Q9BQM9 153 aa11.89□□□□□ -0.51
USB1-206ENST00000562534 YTHDF2Q9Y5A9 579 aaKnown RBP11.89□□□□□ -0.51
USB1-206ENST00000562534 NBEAL2Q6ZNJ1 2754 aa11.88□□□□□ -0.51
USB1-206ENST00000562534 FBLL1A6NHQ2 334 aaKnown RBP11.88□□□□□ -0.51
USB1-206ENST00000562534 GGTLC3B5MD39 225 aa11.88□□□□□ -0.51
USB1-206ENST00000562534 F6UZH7 168 aa11.88□□□□□ -0.51
USB1-206ENST00000562534 INSP01308 110 aa11.88□□□□□ -0.51
USB1-206ENST00000562534 MIFP14174 115 aa11.88□□□□□ -0.51
USB1-206ENST00000562534 CST9LP1Q5W188 147 aa11.88□□□□□ -0.51
USB1-206ENST00000562534 GOLT1AQ6ZVE7 132 aa11.88□□□□□ -0.51
USB1-206ENST00000562534 TMEM256Q8N2U0 113 aa11.88□□□□□ -0.51
USB1-206ENST00000562534 HIST1H2BAQ96A08 127 aa11.88□□□□□ -0.51
USB1-206ENST00000562534 FAM19A4Q96LR4 140 aa11.88□□□□□ -0.51
USB1-206ENST00000562534 TCEAL7Q9BRU2 100 aa11.88□□□□□ -0.51
USB1-206ENST00000562534 TMEM208Q9BTX3 173 aa11.88□□□□□ -0.51
USB1-206ENST00000562534 RPH3ALQ9UNE2 315 aa11.88□□□□□ -0.51
USB1-206ENST00000562534 TRAV12-2A0A075B6T6 113 aa11.87□□□□□ -0.51
USB1-206ENST00000562534 A0A1B0GV50 99 aa11.87□□□□□ -0.51
USB1-206ENST00000562534 PAGE4O60829 102 aa11.87□□□□□ -0.51
USB1-206ENST00000562534 GPX1P07203 203 aa11.87□□□□□ -0.51
USB1-206ENST00000562534 CRISP2P16562 243 aa11.87□□□□□ -0.51
USB1-206ENST00000562534 PMS2P11Q13670 270 aa11.87□□□□□ -0.51
USB1-206ENST00000562534 C1orf158Q8N1D5 194 aa11.87□□□□□ -0.51
USB1-206ENST00000562534 ATG101Q9BSB4 218 aa11.87□□□□□ -0.51
USB1-206ENST00000562534 IGHV3OR16-12A0A075B7B8 117 aa11.86□□□□□ -0.51
USB1-206ENST00000562534 GNG5P63218 68 aa11.86□□□□□ -0.51
USB1-206ENST00000562534 CCL20P78556 96 aa11.86□□□□□ -0.51
USB1-206ENST00000562534 CCDC28AQ8IWP9 274 aa11.86□□□□□ -0.51
USB1-206ENST00000562534 CYB561D1Q8N8Q1 229 aa11.86□□□□□ -0.51
USB1-206ENST00000562534 WWC2-AS2Q96NR7 200 aa11.86□□□□□ -0.51
USB1-206ENST00000562534 MANBALQ9NQG1 85 aa11.86□□□□□ -0.51
USB1-206ENST00000562534 X6R8D5 127 aa11.86□□□□□ -0.51
USB1-206ENST00000562534 TGP01266 2768 aa11.85□□□□□ -0.51
USB1-206ENST00000562534 KLLNB2CW77 178 aa11.85□□□□□ -0.51
USB1-206ENST00000562534 LINC01587Q99440 93 aa11.85□□□□□ -0.51
USB1-206ENST00000562534 TXNDC17Q9BRA2 123 aa11.85□□□□□ -0.51
USB1-206ENST00000562534 EDA2RQ9HAV5 297 aa11.85□□□□□ -0.51
USB1-206ENST00000562534 DNAH9Q9NYC9 4486 aa11.85□□□□□ -0.51
USB1-206ENST00000562534 COL7A1Q02388 2944 aa11.84□□□□□ -0.51
USB1-206ENST00000562534 H7BYZ3 331 aa11.84□□□□□ -0.51
USB1-206ENST00000562534 IFNA1P01562 189 aa11.84□□□□□ -0.51
USB1-206ENST00000562534 RNASE4P34096 147 aaKnown RBP11.84□□□□□ -0.51
USB1-206ENST00000562534 GFI1BQ5VTD9 330 aa11.84□□□□□ -0.51
USB1-206ENST00000562534 TEX261Q6UWH6 196 aa11.84□□□□□ -0.51
USB1-206ENST00000562534 NIPSNAP3BQ9BS92 247 aa11.84□□□□□ -0.51
USB1-206ENST00000562534 GNG13Q9P2W3 67 aa11.84□□□□□ -0.51
USB1-206ENST00000562534 A0A0J9YWU9 116 aa11.83□□□□□ -0.52
USB1-206ENST00000562534 C7orf71A4D174 169 aa11.83□□□□□ -0.52
USB1-206ENST00000562534 J3KRW8 73 aa11.83□□□□□ -0.52
USB1-206ENST00000562534 PEX7O00628 323 aa11.83□□□□□ -0.52
USB1-206ENST00000562534 TAGLN2P37802 199 aaKnown RBP11.83□□□□□ -0.52
USB1-206ENST00000562534 TAS2R60P59551 318 aa11.83□□□□□ -0.52
USB1-206ENST00000562534 FLI1Q01543 452 aaPredicted RBP11.83□□□□□ -0.52
USB1-206ENST00000562534 KIR3DS1Q14943 382 aa11.83□□□□□ -0.52
USB1-206ENST00000562534 RRN3P1Q2M238 152 aa11.83□□□□□ -0.52
USB1-206ENST00000562534 SAPCD1Q5SSQ6 148 aa11.83□□□□□ -0.52
USB1-206ENST00000562534 ZFAND2AQ8N6M9 145 aa11.83□□□□□ -0.52
USB1-206ENST00000562534 TMEM75Q8N9X5 138 aa11.83□□□□□ -0.52
USB1-206ENST00000562534 Q8NAQ8 132 aa11.83□□□□□ -0.52
USB1-206ENST00000562534 Q8TAT8 98 aa11.83□□□□□ -0.52
USB1-206ENST00000562534 NDFIP1Q9BT67 221 aa11.83□□□□□ -0.52
USB1-206ENST00000562534 C11orf68Q9H3H3 251 aaKnown RBP11.83□□□□□ -0.52
USB1-206ENST00000562534 PSG8Q9UQ74 426 aa11.83□□□□□ -0.52
USB1-206ENST00000562534 TRAV8-1A0A0A6YYK1 113 aa11.82□□□□□ -0.52
USB1-206ENST00000562534 TRAV12-3A0A0B4J271 114 aa11.82□□□□□ -0.52
USB1-206ENST00000562534 TMEM189A5PLL7 270 aa11.82□□□□□ -0.52
USB1-206ENST00000562534 C11orf94C9JXX5 98 aa11.82□□□□□ -0.52
USB1-206ENST00000562534 ATP5G3P48201 142 aa11.82□□□□□ -0.52
USB1-206ENST00000562534 LYPD6BQ8NI32 183 aa11.82□□□□□ -0.52
USB1-206ENST00000562534 IL17DQ8TAD2 202 aa11.82□□□□□ -0.52
USB1-206ENST00000562534 TREM1Q9NP99 234 aa11.82□□□□□ -0.52
USB1-206ENST00000562534 IGHV4-28A0A0C4DH34 117 aa11.81□□□□□ -0.52
USB1-206ENST00000562534 ZNF324O75467 553 aaPredicted RBP11.81□□□□□ -0.52
USB1-206ENST00000562534 IGLV2-11P01706 119 aa11.81□□□□□ -0.52
USB1-206ENST00000562534 S100A9P06702 114 aaKnown RBP11.81□□□□□ -0.52
USB1-206ENST00000562534 ZNF680Q8NEM1 530 aa11.81□□□□□ -0.52
USB1-206ENST00000562534 SGK494Q96LW2 274 aa11.81□□□□□ -0.52
USB1-206ENST00000562534 LINC00479Q96M42 142 aa11.81□□□□□ -0.52
USB1-206ENST00000562534 PYGO2Q9BRQ0 406 aa11.81□□□□□ -0.52
USB1-206ENST00000562534 KLF12Q9Y4X4 402 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms