RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 KLLNB2CW77 178 aa3.48□□□□□ -1.85
UBR1-203ENST00000562173 PANO1I0J062 215 aa3.48□□□□□ -1.85
UBR1-203ENST00000562173 M6PRP20645 277 aa3.48□□□□□ -1.85
UBR1-203ENST00000562173 LYZP61626 148 aa3.48□□□□□ -1.85
UBR1-203ENST00000562173 SNRPD3P62318 126 aaKnown RBP3.48□□□□□ -1.85
UBR1-203ENST00000562173 HIST1H1AQ02539 215 aaPredicted RBP3.48□□□□□ -1.85
UBR1-203ENST00000562173 BSXQ3C1V8 233 aa3.48□□□□□ -1.85
UBR1-203ENST00000562173 TTC32Q5I0X7 151 aa3.48□□□□□ -1.85
UBR1-203ENST00000562173 SPANXN2Q5MJ10 180 aa3.48□□□□□ -1.85
UBR1-203ENST00000562173 Q6ZSA8 131 aa3.48□□□□□ -1.85
UBR1-203ENST00000562173 H2BFWTQ7Z2G1 175 aa3.48□□□□□ -1.85
UBR1-203ENST00000562173 DHRSXQ8N5I4 330 aa3.48□□□□□ -1.85
UBR1-203ENST00000562173 SLC35G3Q8N808 338 aa3.48□□□□□ -1.85
UBR1-203ENST00000562173 CIRBP-AS1Q8TBR5 109 aa3.48□□□□□ -1.85
UBR1-203ENST00000562173 DEFB104AQ8WTQ1 72 aa3.48□□□□□ -1.85
UBR1-203ENST00000562173 LINC00477Q96M19 166 aa3.48□□□□□ -1.85
UBR1-203ENST00000562173 AUNIPQ9H7T9 357 aa3.48□□□□□ -1.85
UBR1-203ENST00000562173 SLC25A22Q9H936 323 aa3.48□□□□□ -1.85
UBR1-203ENST00000562173 RHBDL2Q9NX52 303 aa3.48□□□□□ -1.85
UBR1-203ENST00000562173 DOK5Q9P104 306 aa3.48□□□□□ -1.85
UBR1-203ENST00000562173 RPH3ALQ9UNE2 315 aa3.48□□□□□ -1.85
UBR1-203ENST00000562173 IRGMA1A4Y4 181 aa3.47□□□□□ -1.85
UBR1-203ENST00000562173 ANKRD65E5RJM6 399 aa3.47□□□□□ -1.85
UBR1-203ENST00000562173 SLC22A5O76082 557 aa3.47□□□□□ -1.85
UBR1-203ENST00000562173 INSP01308 110 aa3.47□□□□□ -1.85
UBR1-203ENST00000562173 CTXN2P0C2S0 81 aa3.47□□□□□ -1.85
UBR1-203ENST00000562173 SFTA3P0C7M3 94 aa3.47□□□□□ -1.85
UBR1-203ENST00000562173 CT45A10P0DMU9 189 aa3.47□□□□□ -1.85
UBR1-203ENST00000562173 HRH1P35367 487 aa3.47□□□□□ -1.85
UBR1-203ENST00000562173 TAS2R20P59543 309 aa3.47□□□□□ -1.85
UBR1-203ENST00000562173 NUTF2P61970 127 aaKnown RBP3.47□□□□□ -1.85
UBR1-203ENST00000562173 THOC7Q6I9Y2 204 aaKnown RBP3.47□□□□□ -1.85
UBR1-203ENST00000562173 LYPD5Q6UWN5 251 aa3.47□□□□□ -1.85
UBR1-203ENST00000562173 C2orf66Q6UXQ4 117 aa3.47□□□□□ -1.85
UBR1-203ENST00000562173 C8orf59Q8N0T1 100 aaPredicted RBP3.47□□□□□ -1.85
UBR1-203ENST00000562173 Q8N814 137 aa3.47□□□□□ -1.85
UBR1-203ENST00000562173 MGLLQ99685 303 aa3.47□□□□□ -1.85
UBR1-203ENST00000562173 RSG1Q9BU20 258 aa3.47□□□□□ -1.85
UBR1-203ENST00000562173 TMEM70Q9BUB7 260 aa3.47□□□□□ -1.85
UBR1-203ENST00000562173 CCDC90BQ9GZT6 254 aa3.47□□□□□ -1.85
UBR1-203ENST00000562173 MRPL16Q9NX20 251 aaKnown RBP3.47□□□□□ -1.85
UBR1-203ENST00000562173 KLF12Q9Y4X4 402 aa3.47□□□□□ -1.85
UBR1-203ENST00000562173 KIF25-AS1Q9Y6Z4 181 aa3.47□□□□□ -1.85
UBR1-203ENST00000562173 FAM168BA1KXE4 195 aa3.46□□□□□ -1.86
UBR1-203ENST00000562173 METTL21EPA6NDL7 271 aa3.46□□□□□ -1.86
UBR1-203ENST00000562173 GPR31O00270 319 aa3.46□□□□□ -1.86
UBR1-203ENST00000562173 SDC2P34741 201 aa3.46□□□□□ -1.86
UBR1-203ENST00000562173 SNCAP37840 140 aa3.46□□□□□ -1.86
UBR1-203ENST00000562173 ALDH3B2P48448 385 aa3.46□□□□□ -1.86
UBR1-203ENST00000562173 PSMB3P49720 205 aa3.46□□□□□ -1.86
UBR1-203ENST00000562173 MEOX2P50222 304 aa3.46□□□□□ -1.86
UBR1-203ENST00000562173 ERHP84090 104 aaKnown RBP3.46□□□□□ -1.86
UBR1-203ENST00000562173 MLLT11Q13015 90 aaPredicted RBP3.46□□□□□ -1.86
UBR1-203ENST00000562173 PRR9Q5T870 116 aa3.46□□□□□ -1.86
UBR1-203ENST00000562173 HSD17B13Q7Z5P4 300 aaPredicted RBP3.46□□□□□ -1.86
UBR1-203ENST00000562173 OR4C5Q8NGB2 326 aa3.46□□□□□ -1.86
UBR1-203ENST00000562173 OR1S2Q8NGQ3 325 aa3.46□□□□□ -1.86
UBR1-203ENST00000562173 Q8WTZ3 238 aa3.46□□□□□ -1.86
UBR1-203ENST00000562173 TXNL4BQ9NX01 149 aaKnown RBP3.46□□□□□ -1.86
UBR1-203ENST00000562173 TRAV1-2A0A0B4J238 106 aa3.45□□□□□ -1.86
UBR1-203ENST00000562173 TRAV12-3A0A0B4J271 114 aa3.45□□□□□ -1.86
UBR1-203ENST00000562173 TRBV7-9A0A0J9YWB2 115 aa3.45□□□□□ -1.86
UBR1-203ENST00000562173 SLC17A3O00476 420 aa3.45□□□□□ -1.86
UBR1-203ENST00000562173 CYB5BO43169 146 aa3.45□□□□□ -1.86
UBR1-203ENST00000562173 ARL6IP5O75915 188 aa3.45□□□□□ -1.86
UBR1-203ENST00000562173 OXTP01178 125 aa3.45□□□□□ -1.86
UBR1-203ENST00000562173 IGHV3-30P01768 117 aa3.45□□□□□ -1.86
UBR1-203ENST00000562173 IGHV3-33P01772 117 aa3.45□□□□□ -1.86
UBR1-203ENST00000562173 CD5P06127 495 aa3.45□□□□□ -1.86
UBR1-203ENST00000562173 RD3LP0DJH9 198 aa3.45□□□□□ -1.86
UBR1-203ENST00000562173 IGHV3-30-3P0DP02 117 aa3.45□□□□□ -1.86
UBR1-203ENST00000562173 IGHV3-30-5P0DP03 117 aa3.45□□□□□ -1.86
UBR1-203ENST00000562173 HSPA13P48723 471 aa3.45□□□□□ -1.86
UBR1-203ENST00000562173 EIF2B2P49770 351 aaKnown RBP3.45□□□□□ -1.86
UBR1-203ENST00000562173 AQP4P55087 323 aa3.45□□□□□ -1.86
UBR1-203ENST00000562173 YPEL3P61236 119 aaPredicted RBP3.45□□□□□ -1.86
UBR1-203ENST00000562173 RHOBP62745 196 aa3.45□□□□□ -1.86
UBR1-203ENST00000562173 MSMO1Q15800 293 aa3.45□□□□□ -1.86
UBR1-203ENST00000562173 IDNKQ5T6J7 187 aa3.45□□□□□ -1.86
UBR1-203ENST00000562173 EBLN2Q6P2I7 272 aa3.45□□□□□ -1.86
UBR1-203ENST00000562173 SFXN4Q6P4A7 337 aa3.45□□□□□ -1.86
UBR1-203ENST00000562173 TMEM144Q7Z5S9 345 aa3.45□□□□□ -1.86
UBR1-203ENST00000562173 C10orf67Q8IYJ2 551 aa3.45□□□□□ -1.86
UBR1-203ENST00000562173 C11orf72Q8NBR9 251 aa3.45□□□□□ -1.86
UBR1-203ENST00000562173 ZNF738Q8NE65 137 aa3.45□□□□□ -1.86
UBR1-203ENST00000562173 LINC00467Q9BRT7 94 aa3.45□□□□□ -1.86
UBR1-203ENST00000562173 DUSP21Q9H596 190 aa3.45□□□□□ -1.86
UBR1-203ENST00000562173 ANAPC10Q9UM13 185 aa3.45□□□□□ -1.86
UBR1-203ENST00000562173 TIMM8BQ9Y5J9 83 aaPredicted RBP3.45□□□□□ -1.86
UBR1-203ENST00000562173 TRDV1A0A1B0GX56 115 aa3.44□□□□□ -1.86
UBR1-203ENST00000562173 PGAM2P15259 253 aa3.44□□□□□ -1.86
UBR1-203ENST00000562173 MYL9P24844 172 aa3.44□□□□□ -1.86
UBR1-203ENST00000562173 TSPOP30536 169 aa3.44□□□□□ -1.86
UBR1-203ENST00000562173 CDKN1BP46527 198 aa3.44□□□□□ -1.86
UBR1-203ENST00000562173 SEC61GP60059 68 aa3.44□□□□□ -1.86
UBR1-203ENST00000562173 CXCL6P80162 114 aa3.44□□□□□ -1.86
UBR1-203ENST00000562173 ERCC8Q13216 396 aa3.44□□□□□ -1.86
UBR1-203ENST00000562173 BTN1A1Q13410 526 aa3.44□□□□□ -1.86
UBR1-203ENST00000562173 BAALCQ8WXS3 180 aa3.44□□□□□ -1.86
UBR1-203ENST00000562173 MBD2Q9UBB5 411 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms