RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 TMEM75Q8N9X5 138 aa12.79□□□□□ -0.36
AP4E1-205ENST00000561393 C1orf159Q96HA4 380 aa12.79□□□□□ -0.36
AP4E1-205ENST00000561393 RNF224P0DH78 156 aa12.79□□□□□ -0.36
AP4E1-205ENST00000561393 TSPOP30536 169 aa12.79□□□□□ -0.36
AP4E1-205ENST00000561393 PAX1P15863 534 aa12.78□□□□□ -0.36
AP4E1-205ENST00000561393 C8orf86Q6ZUL3 223 aa12.78□□□□□ -0.36
AP4E1-205ENST00000561393 SMIM12Q96EX1 92 aa12.78□□□□□ -0.36
AP4E1-205ENST00000561393 TRAV21A0A0B4J279 112 aa12.78□□□□□ -0.36
AP4E1-205ENST00000561393 IFITM10A6NMD0 228 aa12.78□□□□□ -0.36
AP4E1-205ENST00000561393 ZNF502Q8TBZ5 544 aa12.78□□□□□ -0.36
AP4E1-205ENST00000561393 C14orf144Q96I85 54 aa12.78□□□□□ -0.36
AP4E1-205ENST00000561393 PRR25Q96S07 402 aa12.78□□□□□ -0.36
AP4E1-205ENST00000561393 ZNF492Q9P255 531 aa12.78□□□□□ -0.36
AP4E1-205ENST00000561393 FRMD6-AS1P0C7T7 363 aa12.78□□□□□ -0.36
AP4E1-205ENST00000561393 EVI2AP22794 236 aa12.78□□□□□ -0.36
AP4E1-205ENST00000561393 RASL11AQ6T310 242 aa12.78□□□□□ -0.36
AP4E1-205ENST00000561393 SMIM27A0A1W2PRY6 76 aa12.77□□□□□ -0.36
AP4E1-205ENST00000561393 OVOL1O14753 267 aa12.77□□□□□ -0.36
AP4E1-205ENST00000561393 AMN1Q8IY45 258 aa12.77□□□□□ -0.36
AP4E1-205ENST00000561393 SPOCK3Q9BQ16 436 aa12.77□□□□□ -0.36
AP4E1-205ENST00000561393 D6R8Y8 96 aa12.77□□□□□ -0.37
AP4E1-205ENST00000561393 CD7P09564 240 aa12.77□□□□□ -0.37
AP4E1-205ENST00000561393 ZNF418Q8TF45 676 aaPredicted RBP12.77□□□□□ -0.37
AP4E1-205ENST00000561393 TMEM213A2RRL7 107 aa12.77□□□□□ -0.37
AP4E1-205ENST00000561393 NUDT3O95989 172 aa12.77□□□□□ -0.37
AP4E1-205ENST00000561393 REC114Q7Z4M0 266 aa12.77□□□□□ -0.37
AP4E1-205ENST00000561393 NMUP48645 174 aa12.76□□□□□ -0.37
AP4E1-205ENST00000561393 GOLT1BQ9Y3E0 138 aa12.76□□□□□ -0.37
AP4E1-205ENST00000561393 OR4C46A6NHA9 309 aa12.76□□□□□ -0.37
AP4E1-205ENST00000561393 LTAP01374 205 aa12.75□□□□□ -0.37
AP4E1-205ENST00000561393 FXYD7P58549 80 aa12.75□□□□□ -0.37
AP4E1-205ENST00000561393 RAI1Q7Z5J4 1906 aaPredicted RBP12.75□□□□□ -0.37
AP4E1-205ENST00000561393 J3QKU1 62 aa12.75□□□□□ -0.37
AP4E1-205ENST00000561393 HOXA3O43365 443 aaPredicted RBP12.75□□□□□ -0.37
AP4E1-205ENST00000561393 ZNF56Q15929 161 aa12.75□□□□□ -0.37
AP4E1-205ENST00000561393 C18orf32Q8TCD1 76 aa12.75□□□□□ -0.37
AP4E1-205ENST00000561393 ACANP16112 2415 aa12.75□□□□□ -0.37
AP4E1-205ENST00000561393 F2Z2F3 143 aa12.75□□□□□ -0.37
AP4E1-205ENST00000561393 SMKR1H3BMG3 65 aa12.75□□□□□ -0.37
AP4E1-205ENST00000561393 PTTG1IPP53801 180 aa12.75□□□□□ -0.37
AP4E1-205ENST00000561393 RAX2Q96IS3 184 aa12.75□□□□□ -0.37
AP4E1-205ENST00000561393 UQCR10Q9UDW1 63 aa12.75□□□□□ -0.37
AP4E1-205ENST00000561393 SYT8Q8NBV8 401 aa12.74□□□□□ -0.37
AP4E1-205ENST00000561393 IGF2BP2-AS1Q96M15 143 aa12.74□□□□□ -0.37
AP4E1-205ENST00000561393 TET2Q6N021 2002 aaPredicted RBP12.74□□□□□ -0.37
AP4E1-205ENST00000561393 DEFB113Q30KQ7 82 aa12.74□□□□□ -0.37
AP4E1-205ENST00000561393 C1orf194Q5T5A4 169 aa12.74□□□□□ -0.37
AP4E1-205ENST00000561393 PRDM13Q9H4Q3 707 aa12.74□□□□□ -0.37
AP4E1-205ENST00000561393 VAMP3Q15836 100 aa12.74□□□□□ -0.37
AP4E1-205ENST00000561393 BCL6BQ8N143 479 aaPredicted RBP12.74□□□□□ -0.37
AP4E1-205ENST00000561393 J3QLI3 93 aa12.73□□□□□ -0.37
AP4E1-205ENST00000561393 NDUFA4O00483 81 aa12.73□□□□□ -0.37
AP4E1-205ENST00000561393 CT83Q5H943 113 aa12.73□□□□□ -0.37
AP4E1-205ENST00000561393 HINT1P49773 126 aaPredicted RBP12.73□□□□□ -0.37
AP4E1-205ENST00000561393 TMEM190Q8WZ59 177 aa12.73□□□□□ -0.37
AP4E1-205ENST00000561393 PEMTQ9UBM1 199 aa12.73□□□□□ -0.37
AP4E1-205ENST00000561393 KLHL30-AS1Q8NEE0 82 aa12.73□□□□□ -0.37
AP4E1-205ENST00000561393 A8MWP6 167 aa12.72□□□□□ -0.37
AP4E1-205ENST00000561393 C3orf79P0CE67 100 aa12.72□□□□□ -0.37
AP4E1-205ENST00000561393 Q0VG73 95 aa12.72□□□□□ -0.37
AP4E1-205ENST00000561393 LINC00477Q96M19 166 aa12.72□□□□□ -0.37
AP4E1-205ENST00000561393 GFRA4Q9GZZ7 299 aa12.72□□□□□ -0.37
AP4E1-205ENST00000561393 MUC3AQ02505 3323 aa12.72□□□□□ -0.37
AP4E1-205ENST00000561393 TRAV12-3A0A0B4J271 114 aa12.72□□□□□ -0.37
AP4E1-205ENST00000561393 WI2-2373I1.2A0A1W2PRP0 233 aa12.72□□□□□ -0.37
AP4E1-205ENST00000561393 BUB3O43684 328 aa12.72□□□□□ -0.37
AP4E1-205ENST00000561393 FRYQ5TBA9 3013 aa12.72□□□□□ -0.37
AP4E1-205ENST00000561393 ANKRD17O75179 2603 aaKnown RBP12.72□□□□□ -0.37
AP4E1-205ENST00000561393 LOC102724200A0A096LPH7 203 aaPredicted RBP12.72□□□□□ -0.37
AP4E1-205ENST00000561393 CBY3A6NI87 242 aa12.72□□□□□ -0.37
AP4E1-205ENST00000561393 SAMD13Q5VXD3 122 aa12.71□□□□□ -0.37
AP4E1-205ENST00000561393 SNAI2O43623 268 aa12.71□□□□□ -0.37
AP4E1-205ENST00000561393 DGAT2L7PQ6IED9 249 aa12.71□□□□□ -0.37
AP4E1-205ENST00000561393 CDPF1Q6NVV7 123 aa12.71□□□□□ -0.37
AP4E1-205ENST00000561393 COL27A1Q8IZC6 1860 aaPredicted RBP12.71□□□□□ -0.37
AP4E1-205ENST00000561393 MCRIP2Q9BUT9 160 aaKnown RBP12.71□□□□□ -0.37
AP4E1-205ENST00000561393 FAM231BA6NCW3 169 aa12.71□□□□□ -0.38
AP4E1-205ENST00000561393 F6UB75 175 aa12.7□□□□□ -0.38
AP4E1-205ENST00000561393 ZNF124Q15973 351 aa12.7□□□□□ -0.38
AP4E1-205ENST00000561393 DEFB104AQ8WTQ1 72 aa12.7□□□□□ -0.38
AP4E1-205ENST00000561393 RCHY1Q96PM5 261 aa12.7□□□□□ -0.38
AP4E1-205ENST00000561393 C7orf71A4D174 169 aa12.7□□□□□ -0.38
AP4E1-205ENST00000561393 AGPAT4-IT1Q9H0P7 198 aa12.7□□□□□ -0.38
AP4E1-205ENST00000561393 ZNF664Q8N3J9 261 aa12.7□□□□□ -0.38
AP4E1-205ENST00000561393 DUX3Q96PT4 197 aa12.7□□□□□ -0.38
AP4E1-205ENST00000561393 FN1P02751 2386 aaKnown RBP12.69□□□□□ -0.38
AP4E1-205ENST00000561393 NUPR1O60356 82 aa12.69□□□□□ -0.38
AP4E1-205ENST00000561393 PF4P02776 101 aa12.69□□□□□ -0.38
AP4E1-205ENST00000561393 ZNF843Q8N446 348 aa12.69□□□□□ -0.38
AP4E1-205ENST00000561393 ALKBH7Q9BT30 221 aaPredicted RBP12.69□□□□□ -0.38
AP4E1-205ENST00000561393 VPREB3Q9UKI3 123 aa12.69□□□□□ -0.38
AP4E1-205ENST00000561393 RPLP1P05386 114 aaKnown RBP12.69□□□□□ -0.38
AP4E1-205ENST00000561393 IGLC2P0DOY2 106 aa12.69□□□□□ -0.38
AP4E1-205ENST00000561393 SLC25A34Q6PIV7 304 aa12.69□□□□□ -0.38
AP4E1-205ENST00000561393 TRBV12-3P01733 135 aa12.69□□□□□ -0.38
AP4E1-205ENST00000561393 LEPP41159 167 aa12.69□□□□□ -0.38
AP4E1-205ENST00000561393 EBI3Q14213 229 aa12.69□□□□□ -0.38
AP4E1-205ENST00000561393 CHCHD1Q96BP2 118 aaKnown RBP12.69□□□□□ -0.38
AP4E1-205ENST00000561393 FAM181BA6NEQ2 426 aa12.68□□□□□ -0.38
AP4E1-205ENST00000561393 PPBPP02775 128 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms