RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 PAXXQ9BUH6 204 aa12.07□□□□□ -0.48
CDC42BPB-208ENST00000561271 AGPAT4-IT1Q9H0P7 198 aa12.07□□□□□ -0.48
CDC42BPB-208ENST00000561271 OR51M1Q9H341 326 aa12.07□□□□□ -0.48
CDC42BPB-208ENST00000561271 FUT9Q9Y231 359 aa12.07□□□□□ -0.48
CDC42BPB-208ENST00000561271 PKHD1P08F94 4074 aa12.06□□□□□ -0.48
CDC42BPB-208ENST00000561271 SNURFLB1AK76 121 aa12.06□□□□□ -0.48
CDC42BPB-208ENST00000561271 KLLNB2CW77 178 aa12.06□□□□□ -0.48
CDC42BPB-208ENST00000561271 RTL8CO15255 209 aa12.06□□□□□ -0.48
CDC42BPB-208ENST00000561271 OR7C2O60412 319 aa12.06□□□□□ -0.48
CDC42BPB-208ENST00000561271 SLC25A5P05141 298 aaKnown RBP12.06□□□□□ -0.48
CDC42BPB-208ENST00000561271 NBEAP1P0C6P0 100 aa12.06□□□□□ -0.48
CDC42BPB-208ENST00000561271 CD300CQ08708 224 aa12.06□□□□□ -0.48
CDC42BPB-208ENST00000561271 LGALS9BQ3B8N2 356 aa12.06□□□□□ -0.48
CDC42BPB-208ENST00000561271 FFAR4Q5NUL3 377 aa12.06□□□□□ -0.48
CDC42BPB-208ENST00000561271 LINC00336Q6ZUF6 198 aa12.06□□□□□ -0.48
CDC42BPB-208ENST00000561271 LINC00612Q8N6U2 182 aa12.06□□□□□ -0.48
CDC42BPB-208ENST00000561271 FAM19A4Q96LR4 140 aa12.06□□□□□ -0.48
CDC42BPB-208ENST00000561271 PYGO2Q9BRQ0 406 aa12.06□□□□□ -0.48
CDC42BPB-208ENST00000561271 GAGE12BA1L429 117 aa12.05□□□□□ -0.48
CDC42BPB-208ENST00000561271 GAGE7O76087 117 aa12.05□□□□□ -0.48
CDC42BPB-208ENST00000561271 GAGE12FP0CL80 117 aa12.05□□□□□ -0.48
CDC42BPB-208ENST00000561271 GAGE12GP0CL81 117 aa12.05□□□□□ -0.48
CDC42BPB-208ENST00000561271 GAGE12IP0CL82 117 aa12.05□□□□□ -0.48
CDC42BPB-208ENST00000561271 RPL12P30050 165 aaKnown RBP12.05□□□□□ -0.48
CDC42BPB-208ENST00000561271 PRR9Q5T870 116 aa12.05□□□□□ -0.48
CDC42BPB-208ENST00000561271 Q6ZR54 194 aa12.05□□□□□ -0.48
CDC42BPB-208ENST00000561271 C9orf47Q6ZRZ4 202 aa12.05□□□□□ -0.48
CDC42BPB-208ENST00000561271 RNF141Q8WVD5 230 aa12.05□□□□□ -0.48
CDC42BPB-208ENST00000561271 VGLL1Q99990 258 aa12.05□□□□□ -0.48
CDC42BPB-208ENST00000561271 ATG101Q9BSB4 218 aa12.05□□□□□ -0.48
CDC42BPB-208ENST00000561271 BATF3Q9NR55 127 aa12.05□□□□□ -0.48
CDC42BPB-208ENST00000561271 ALG5Q9Y673 324 aa12.05□□□□□ -0.48
CDC42BPB-208ENST00000561271 EIF3GO75821 320 aaKnown RBP eCLIP12.04□□□□□ -0.48
CDC42BPB-208ENST00000561271 UBE2L3P68036 154 aaKnown RBP12.04□□□□□ -0.48
CDC42BPB-208ENST00000561271 Q8TAT8 98 aa12.04□□□□□ -0.48
CDC42BPB-208ENST00000561271 ZNF503Q96F45 646 aa12.04□□□□□ -0.48
CDC42BPB-208ENST00000561271 LINC00477Q96M19 166 aa12.04□□□□□ -0.48
CDC42BPB-208ENST00000561271 A0A1B0GVY2 172 aa12.03□□□□□ -0.48
CDC42BPB-208ENST00000561271 PRSS29PA6NIE9 313 aa12.03□□□□□ -0.48
CDC42BPB-208ENST00000561271 IFNA5P01569 189 aa12.03□□□□□ -0.48
CDC42BPB-208ENST00000561271 RNASE4P34096 147 aaKnown RBP12.03□□□□□ -0.48
CDC42BPB-208ENST00000561271 TMEM78Q5T7P6 136 aa12.03□□□□□ -0.48
CDC42BPB-208ENST00000561271 Q6ZTI0 123 aa12.03□□□□□ -0.48
CDC42BPB-208ENST00000561271 SCGB1C1Q8TD33 95 aa12.03□□□□□ -0.48
CDC42BPB-208ENST00000561271 WFDC1Q9HC57 220 aa12.03□□□□□ -0.48
CDC42BPB-208ENST00000561271 GPX1P07203 203 aa12.02□□□□□ -0.49
CDC42BPB-208ENST00000561271 CRISP2P16562 243 aa12.02□□□□□ -0.49
CDC42BPB-208ENST00000561271 HOXA5P20719 270 aa12.02□□□□□ -0.49
CDC42BPB-208ENST00000561271 OR5I1Q13606 314 aa12.02□□□□□ -0.49
CDC42BPB-208ENST00000561271 ZFAND2AQ8N6M9 145 aa12.02□□□□□ -0.49
CDC42BPB-208ENST00000561271 C11orf72Q8NBR9 251 aa12.02□□□□□ -0.49
CDC42BPB-208ENST00000561271 TMPRSS5Q9H3S3 457 aa12.02□□□□□ -0.49
CDC42BPB-208ENST00000561271 GSN-AS1Q9NRJ2 163 aa12.02□□□□□ -0.49
CDC42BPB-208ENST00000561271 KIAA1109Q2LD37 5005 aa12.02□□□□□ -0.49
CDC42BPB-208ENST00000561271 PKD1P98161 4303 aa12.02□□□□□ -0.49
CDC42BPB-208ENST00000561271 TRAV26-1A0A087WT03 109 aa12.01□□□□□ -0.49
CDC42BPB-208ENST00000561271 ZNF324O75467 553 aaPredicted RBP12.01□□□□□ -0.49
CDC42BPB-208ENST00000561271 RANP62826 216 aaKnown RBP12.01□□□□□ -0.49
CDC42BPB-208ENST00000561271 KHDC3LQ587J8 217 aa12.01□□□□□ -0.49
CDC42BPB-208ENST00000561271 Q6ZQT7 251 aa12.01□□□□□ -0.49
CDC42BPB-208ENST00000561271 EIF4E3Q8N5X7 224 aaKnown RBP12.01□□□□□ -0.49
CDC42BPB-208ENST00000561271 ZNF680Q8NEM1 530 aa12.01□□□□□ -0.49
CDC42BPB-208ENST00000561271 Q9H3A6 140 aa12.01□□□□□ -0.49
CDC42BPB-208ENST00000561271 ZNF492Q9P255 531 aa12.01□□□□□ -0.49
CDC42BPB-208ENST00000561271 A0A0J9YY99 117 aa12□□□□□ -0.49
CDC42BPB-208ENST00000561271 FAM3BP58499 235 aaPredicted RBP12□□□□□ -0.49
CDC42BPB-208ENST00000561271 DAZ2Q13117 558 aaKnown RBP12□□□□□ -0.49
CDC42BPB-208ENST00000561271 HERC2O95714 4834 aa12□□□□□ -0.49
CDC42BPB-208ENST00000561271 PTTG1O95997 202 aa11.99□□□□□ -0.49
CDC42BPB-208ENST00000561271 M6PRP20645 277 aa11.99□□□□□ -0.49
CDC42BPB-208ENST00000561271 ZNF138P52744 262 aa11.99□□□□□ -0.49
CDC42BPB-208ENST00000561271 TAS2R45P59539 299 aa11.99□□□□□ -0.49
CDC42BPB-208ENST00000561271 ZNRF2Q8NHG8 242 aa11.99□□□□□ -0.49
CDC42BPB-208ENST00000561271 GNPNAT1Q96EK6 184 aaPredicted RBP11.99□□□□□ -0.49
CDC42BPB-208ENST00000561271 LINC00467Q9BRT7 94 aa11.99□□□□□ -0.49
CDC42BPB-208ENST00000561271 LINC00588Q9Y4M8 146 aa11.99□□□□□ -0.49
CDC42BPB-208ENST00000561271 TRGV1A0A0A0MS02 117 aa11.98□□□□□ -0.49
CDC42BPB-208ENST00000561271 RGS13O14921 159 aa11.98□□□□□ -0.49
CDC42BPB-208ENST00000561271 NMBP08949 121 aa11.98□□□□□ -0.49
CDC42BPB-208ENST00000561271 CSN1S1P47710 185 aa11.98□□□□□ -0.49
CDC42BPB-208ENST00000561271 CCL18P55774 89 aa11.98□□□□□ -0.49
CDC42BPB-208ENST00000561271 RAB2AP61019 212 aa11.98□□□□□ -0.49
CDC42BPB-208ENST00000561271 ANXA2RQ3ZCQ2 193 aa11.98□□□□□ -0.49
CDC42BPB-208ENST00000561271 TP53TG3Q9ULZ0 132 aa11.98□□□□□ -0.49
CDC42BPB-208ENST00000561271 KLF12Q9Y4X4 402 aa11.98□□□□□ -0.49
CDC42BPB-208ENST00000561271 TRGV2A0A075B6R0 118 aa11.97□□□□□ -0.49
CDC42BPB-208ENST00000561271 TCL1AP56279 114 aa11.97□□□□□ -0.49
CDC42BPB-208ENST00000561271 C1orf134Q5TEV5 83 aa11.97□□□□□ -0.49
CDC42BPB-208ENST00000561271 RXFP4Q8TDU9 374 aa11.97□□□□□ -0.49
CDC42BPB-208ENST00000561271 RPH3ALQ9UNE2 315 aa11.97□□□□□ -0.49
CDC42BPB-208ENST00000561271 IGHV1OR15-1A0A075B7D0 117 aa11.96□□□□□ -0.49
CDC42BPB-208ENST00000561271 RBAKDNA6NC62 111 aa11.96□□□□□ -0.49
CDC42BPB-208ENST00000561271 HMGB3O15347 200 aaKnown RBP11.96□□□□□ -0.49
CDC42BPB-208ENST00000561271 ACOT6Q3I5F7 207 aaPredicted RBP11.96□□□□□ -0.49
CDC42BPB-208ENST00000561271 SOHLH1Q5JUK2 328 aa11.96□□□□□ -0.49
CDC42BPB-208ENST00000561271 SSX7Q7RTT5 188 aa11.96□□□□□ -0.49
CDC42BPB-208ENST00000561271 LYPD1Q8N2G4 141 aa11.96□□□□□ -0.49
CDC42BPB-208ENST00000561271 HYLS1Q96M11 299 aa11.96□□□□□ -0.49
CDC42BPB-208ENST00000561271 ARPC5LQ9BPX5 153 aa11.96□□□□□ -0.49
CDC42BPB-208ENST00000561271 MED28Q9H204 178 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms