RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 TRBV6-1A0A0K0K1D8 114 aa5.19□□□□□ -1.58
SPG11-224ENST00000561268 TMEM213A2RRL7 107 aa5.19□□□□□ -1.58
SPG11-224ENST00000561268 C3orf84H3BNL1 204 aa5.19□□□□□ -1.58
SPG11-224ENST00000561268 M0R143 59 aa5.19□□□□□ -1.58
SPG11-224ENST00000561268 APELAP0DMC3 54 aa5.19□□□□□ -1.58
SPG11-224ENST00000561268 IGHV4-30-4P0DP06 118 aa5.19□□□□□ -1.58
SPG11-224ENST00000561268 ATP5G3P48201 142 aa5.19□□□□□ -1.58
SPG11-224ENST00000561268 PLP1P60201 277 aa5.19□□□□□ -1.58
SPG11-224ENST00000561268 NUTF2P61970 127 aaKnown RBP5.19□□□□□ -1.58
SPG11-224ENST00000561268 ZNF90Q03938 601 aa5.19□□□□□ -1.58
SPG11-224ENST00000561268 C15orf32Q32M92 178 aa5.19□□□□□ -1.58
SPG11-224ENST00000561268 MIC13Q5XKP0 118 aa5.19□□□□□ -1.58
SPG11-224ENST00000561268 LCN12Q6JVE5 192 aa5.19□□□□□ -1.58
SPG11-224ENST00000561268 C19orf35Q6ZS72 473 aa5.19□□□□□ -1.58
SPG11-224ENST00000561268 CMTM2Q8TAZ6 248 aa5.19□□□□□ -1.58
SPG11-224ENST00000561268 TMEM37Q8WXS4 190 aa5.19□□□□□ -1.58
SPG11-224ENST00000561268 ZNF414Q96IQ9 312 aa5.19□□□□□ -1.58
SPG11-224ENST00000561268 ATP6V0BQ99437 205 aa5.19□□□□□ -1.58
SPG11-224ENST00000561268 GFRA4Q9GZZ7 299 aa5.19□□□□□ -1.58
SPG11-224ENST00000561268 EDA2RQ9HAV5 297 aa5.19□□□□□ -1.58
SPG11-224ENST00000561268 SEPSECSQ9HD40 501 aaKnown RBP5.19□□□□□ -1.58
SPG11-224ENST00000561268 ZNF355PQ9NSJ1 428 aa5.19□□□□□ -1.58
SPG11-224ENST00000561268 PEMTQ9UBM1 199 aa5.19□□□□□ -1.58
SPG11-224ENST00000561268 RNF24Q9Y225 148 aa5.19□□□□□ -1.58
SPG11-224ENST00000561268 KLF12Q9Y4X4 402 aa5.19□□□□□ -1.58
SPG11-224ENST00000561268 YTHDF2Q9Y5A9 579 aaKnown RBP5.19□□□□□ -1.58
SPG11-224ENST00000561268 STARD9Q9P2P6 4700 aa5.19□□□□□ -1.58
SPG11-224ENST00000561268 RYR3Q15413 4870 aa5.19□□□□□ -1.58
SPG11-224ENST00000561268 TEX50A0A1B0GTY4 177 aa5.18□□□□□ -1.58
SPG11-224ENST00000561268 IZUMO1RA6ND01 250 aa5.18□□□□□ -1.58
SPG11-224ENST00000561268 C2orf70A6NJV1 201 aa5.18□□□□□ -1.58
SPG11-224ENST00000561268 OR2J3O76001 311 aa5.18□□□□□ -1.58
SPG11-224ENST00000561268 ACTL6BO94805 426 aa5.18□□□□□ -1.58
SPG11-224ENST00000561268 RNASE2P10153 161 aaKnown RBP5.18□□□□□ -1.58
SPG11-224ENST00000561268 S100A7AQ86SG5 101 aa5.18□□□□□ -1.58
SPG11-224ENST00000561268 GPHB5Q86YW7 130 aa5.18□□□□□ -1.58
SPG11-224ENST00000561268 MUC7Q8TAX7 377 aa5.18□□□□□ -1.58
SPG11-224ENST00000561268 IGF2BP2-AS1Q96M15 143 aa5.18□□□□□ -1.58
SPG11-224ENST00000561268 MIEN1Q9BRT3 115 aa5.18□□□□□ -1.58
SPG11-224ENST00000561268 MRPL18Q9H0U6 180 aaKnown RBP5.18□□□□□ -1.58
SPG11-224ENST00000561268 DNAJC4Q9NNZ3 241 aa5.18□□□□□ -1.58
SPG11-224ENST00000561268 ZNF586Q9NXT0 402 aa5.18□□□□□ -1.58
SPG11-224ENST00000561268 CBY1Q9Y3M2 126 aa5.18□□□□□ -1.58
SPG11-224ENST00000561268 TRAV3A0A0B4J244 114 aa5.17□□□□□ -1.58
SPG11-224ENST00000561268 F8W735 103 aaPredicted RBP5.17□□□□□ -1.58
SPG11-224ENST00000561268 K7EN84 100 aa5.17□□□□□ -1.58
SPG11-224ENST00000561268 NDUFB8O95169 186 aa5.17□□□□□ -1.58
SPG11-224ENST00000561268 GPX1P07203 203 aa5.17□□□□□ -1.58
SPG11-224ENST00000561268 HIST1H1EP10412 219 aaKnown RBP5.17□□□□□ -1.58
SPG11-224ENST00000561268 MYOD1P15172 320 aa5.17□□□□□ -1.58
SPG11-224ENST00000561268 EDN2P20800 178 aa5.17□□□□□ -1.58
SPG11-224ENST00000561268 ADMP35318 185 aa5.17□□□□□ -1.58
SPG11-224ENST00000561268 ATP5G2Q06055 141 aa5.17□□□□□ -1.58
SPG11-224ENST00000561268 ZNF124Q15973 351 aa5.17□□□□□ -1.58
SPG11-224ENST00000561268 PMCHL1Q16048 86 aa5.17□□□□□ -1.58
SPG11-224ENST00000561268 PDZD11Q5EBL8 140 aa5.17□□□□□ -1.58
SPG11-224ENST00000561268 GCSAMLQ5JQS6 135 aa5.17□□□□□ -1.58
SPG11-224ENST00000561268 IBA57Q5T440 356 aaKnown RBP5.17□□□□□ -1.58
SPG11-224ENST00000561268 TMEM116Q8NCL8 245 aa5.17□□□□□ -1.58
SPG11-224ENST00000561268 OR1L6Q8NGR2 347 aa5.17□□□□□ -1.58
SPG11-224ENST00000561268 ZNF502Q8TBZ5 544 aa5.17□□□□□ -1.58
SPG11-224ENST00000561268 KCNS1Q96KK3 526 aa5.17□□□□□ -1.58
SPG11-224ENST00000561268 NEU1Q99519 415 aa5.17□□□□□ -1.58
SPG11-224ENST00000561268 ASCL2Q99929 193 aa5.17□□□□□ -1.58
SPG11-224ENST00000561268 CHTOPQ9Y3Y2 248 aaKnown RBP5.17□□□□□ -1.58
SPG11-224ENST00000561268 SACSQ9NZJ4 4579 aa5.17□□□□□ -1.58
SPG11-224ENST00000561268 NBEAL2Q6ZNJ1 2754 aa5.17□□□□□ -1.58
SPG11-224ENST00000561268 LYSTQ99698 3801 aa5.16□□□□□ -1.58
SPG11-224ENST00000561268 TRBV7-1A0A0A6YYK4 115 aa5.16□□□□□ -1.58
SPG11-224ENST00000561268 A0A1B0GW15 77 aa5.16□□□□□ -1.58
SPG11-224ENST00000561268 FBLL1A6NHQ2 334 aaKnown RBP5.16□□□□□ -1.58
SPG11-224ENST00000561268 ZNF785A8K8V0 405 aa5.16□□□□□ -1.58
SPG11-224ENST00000561268 SCGB1D1O95968 90 aa5.16□□□□□ -1.58
SPG11-224ENST00000561268 PMCHP20382 165 aa5.16□□□□□ -1.58
SPG11-224ENST00000561268 FCGR2BP31994 310 aaPredicted RBP5.16□□□□□ -1.58
SPG11-224ENST00000561268 MFAP2P55001 183 aa5.16□□□□□ -1.58
SPG11-224ENST00000561268 UBE2G2P60604 165 aa5.16□□□□□ -1.58
SPG11-224ENST00000561268 WT1-ASQ06250 92 aa5.16□□□□□ -1.58
SPG11-224ENST00000561268 DEFB114Q30KQ6 69 aa5.16□□□□□ -1.58
SPG11-224ENST00000561268 CD300EQ496F6 205 aaPredicted RBP5.16□□□□□ -1.58
SPG11-224ENST00000561268 CENPWQ5EE01 88 aa5.16□□□□□ -1.58
SPG11-224ENST00000561268 CASC10Q5T4H9 136 aa5.16□□□□□ -1.58
SPG11-224ENST00000561268 CDPF1Q6NVV7 123 aa5.16□□□□□ -1.58
SPG11-224ENST00000561268 TMEM136Q6ZRR5 245 aa5.16□□□□□ -1.58
SPG11-224ENST00000561268 LYPD1Q8N2G4 141 aa5.16□□□□□ -1.58
SPG11-224ENST00000561268 VN1R17PQ8TDU5 208 aa5.16□□□□□ -1.58
SPG11-224ENST00000561268 EEF1AKMT3Q96AZ1 226 aa5.16□□□□□ -1.58
SPG11-224ENST00000561268 FAM167A-AS1Q96KT0 104 aa5.16□□□□□ -1.58
SPG11-224ENST00000561268 TRGV9Q99603 122 aa5.16□□□□□ -1.58
SPG11-224ENST00000561268 SPATA25Q9BR10 227 aa5.16□□□□□ -1.58
SPG11-224ENST00000561268 DERL1Q9BUN8 251 aa5.16□□□□□ -1.58
SPG11-224ENST00000561268 TMEM14CQ9P0S9 112 aa5.16□□□□□ -1.58
SPG11-224ENST00000561268 ZNF492Q9P255 531 aa5.16□□□□□ -1.58
SPG11-224ENST00000561268 NAT8BQ9UHF3 227 aa5.16□□□□□ -1.58
SPG11-224ENST00000561268 FBXL7Q9UJT9 491 aa5.16□□□□□ -1.58
SPG11-224ENST00000561268 AGRNO00468 2067 aa5.16□□□□□ -1.58
SPG11-224ENST00000561268 IGKV1OR2-108A0A075B7D4 117 aa5.15□□□□□ -1.59
SPG11-224ENST00000561268 ZNF705GA8MUZ8 300 aaPredicted RBP5.15□□□□□ -1.59
SPG11-224ENST00000561268 SNURFLB1AK76 121 aa5.15□□□□□ -1.59
SPG11-224ENST00000561268 GGTLC3B5MD39 225 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms