RNA–Protein interactions for RNA: ENST00000560952.1

RNF111-211, Transcript of ring finger protein 111, humanhuman

TSL 1 (best)

Gene RNF111, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-211ENST00000560952 DEFB123Q8N688 67 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 SIGLECL1Q8N7X8 197 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 NKAPP1Q8N9T2 125 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 MORN4Q8NDC4 146 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 TVP23CQ96ET8 276 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 CHAC1Q9BUX1 264 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 CYTL1Q9NRR1 136 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 LINC00588Q9Y4M8 146 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 FMN2Q9NZ56 1722 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 DMDP11532 3685 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 IGHV3OR16-12A0A075B7B8 117 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 MDFIC2A0A1B0GVS7 189 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 KRTAP9-6A8MVA2 160 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 LINC01565O15544 149 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 NUPR1O60356 82 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 IGLV3-27P01718 113 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 IGHV3-7P01780 117 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 LINC00271P0C7V0 271 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 SMIM13P0DJ93 91 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 IGLL1P15814 213 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 DYNLT3P51808 116 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 MRPS36P82909 103 aaKnown RBP1.85□□□□□ -2.11
RNF111-211ENST00000560952 KIAA0087Q14695 138 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 LINC01554Q52M75 96 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 LAIR2Q6ISS4 152 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 SMIM5Q71RC9 77 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 COMMD6Q7Z4G1 85 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 MDP1Q86V88 176 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 CEND1Q8N111 149 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 POM121L12Q8N7R1 296 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 C15orf53Q8NAA6 179 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 CLDND2Q8NHS1 167 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 GTSF1Q8WW33 167 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 RNASE6Q93091 150 aaKnown RBP1.85□□□□□ -2.11
RNF111-211ENST00000560952 VSIG2Q96IQ7 327 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 OR8B2Q96RD0 313 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 HIST1H4GQ99525 98 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 IL25Q9H293 177 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 Q9H3A6 140 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 TCF20Q9UGU0 1960 aaKnown RBP1.85□□□□□ -2.11
RNF111-211ENST00000560952 NOTCH4Q99466 2003 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 CREBBPQ92793 2442 aa1.85□□□□□ -2.11
RNF111-211ENST00000560952 CEP295Q9C0D2 2601 aa1.84□□□□□ -2.11
RNF111-211ENST00000560952 SCN11AQ9UI33 1791 aa1.84□□□□□ -2.11
RNF111-211ENST00000560952 FER1L5A0AVI2 2057 aa1.84□□□□□ -2.11
RNF111-211ENST00000560952 SPG11Q96JI7 2443 aa1.84□□□□□ -2.11
RNF111-211ENST00000560952 LRRK2Q5S007 2527 aa1.84□□□□□ -2.11
RNF111-211ENST00000560952 IGHV3-20A0A0C4DH32 117 aa1.84□□□□□ -2.11
RNF111-211ENST00000560952 IGKV1-9A0A0C4DH69 117 aa1.84□□□□□ -2.11
RNF111-211ENST00000560952 KLF18A0A0U1RQI7 1052 aa1.84□□□□□ -2.11
RNF111-211ENST00000560952 TIMM17BO60830 172 aa1.84□□□□□ -2.11
RNF111-211ENST00000560952 HBDP02042 147 aa1.84□□□□□ -2.11
RNF111-211ENST00000560952 HLA-DPB1P04440 258 aa1.84□□□□□ -2.11
RNF111-211ENST00000560952 SRP19P09132 144 aaKnown RBP1.84□□□□□ -2.11
RNF111-211ENST00000560952 ELK1P19419 428 aa1.84□□□□□ -2.11
RNF111-211ENST00000560952 COL8A2P25067 703 aa1.84□□□□□ -2.11
RNF111-211ENST00000560952 SSR2P43308 183 aa1.84□□□□□ -2.11
RNF111-211ENST00000560952 UBE2BP63146 152 aa1.84□□□□□ -2.11
RNF111-211ENST00000560952 ZNF876PQ49A33 203 aa1.84□□□□□ -2.11
RNF111-211ENST00000560952 TMEM136Q6ZRR5 245 aa1.84□□□□□ -2.11
RNF111-211ENST00000560952 TMEM61Q8N0U2 210 aa1.84□□□□□ -2.11
RNF111-211ENST00000560952 FGF13Q92913 245 aa1.84□□□□□ -2.11
RNF111-211ENST00000560952 NPCDR1Q9BY65 106 aa1.84□□□□□ -2.11
RNF111-211ENST00000560952 CST11Q9H112 138 aa1.84□□□□□ -2.11
RNF111-211ENST00000560952 ZNF702PQ9H963 129 aa1.84□□□□□ -2.11
RNF111-211ENST00000560952 ZNF492Q9P255 531 aa1.84□□□□□ -2.11
RNF111-211ENST00000560952 FRYLO94915 3013 aa1.84□□□□□ -2.11
RNF111-211ENST00000560952 NRXN3Q9Y4C0 1643 aa1.84□□□□□ -2.11
RNF111-211ENST00000560952 NRAPQ86VF7 1730 aa1.84□□□□□ -2.11
RNF111-211ENST00000560952 LRRK1Q38SD2 2015 aa1.84□□□□□ -2.11
RNF111-211ENST00000560952 TENM4Q6N022 2769 aa1.84□□□□□ -2.12
RNF111-211ENST00000560952 TRAV2A0A0B4J234 112 aa1.84□□□□□ -2.12
RNF111-211ENST00000560952 UBE2L5PA0A1B0GUS4 154 aa1.84□□□□□ -2.12
RNF111-211ENST00000560952 ATOX1O00244 68 aa1.84□□□□□ -2.12
RNF111-211ENST00000560952 ZNF324O75467 553 aaPredicted RBP1.84□□□□□ -2.12
RNF111-211ENST00000560952 PRM2P04554 102 aa1.84□□□□□ -2.12
RNF111-211ENST00000560952 ANK1P16157 1881 aa1.84□□□□□ -2.12
RNF111-211ENST00000560952 IGHV1-2P23083 117 aa1.84□□□□□ -2.12
RNF111-211ENST00000560952 S100A4P26447 101 aaKnown RBP1.84□□□□□ -2.12
RNF111-211ENST00000560952 SYNJ2BPP57105 145 aa1.84□□□□□ -2.12
RNF111-211ENST00000560952 UBE2G1P62253 170 aa1.84□□□□□ -2.12
RNF111-211ENST00000560952 UBE2L3P68036 154 aaKnown RBP1.84□□□□□ -2.12
RNF111-211ENST00000560952 INSL4Q14641 139 aa1.84□□□□□ -2.12
RNF111-211ENST00000560952 MIA3Q5JRA6 1907 aa1.84□□□□□ -2.12
RNF111-211ENST00000560952 RPL7L1Q6DKI1 246 aaKnown RBP1.84□□□□□ -2.12
RNF111-211ENST00000560952 GUSBP11Q6P575 273 aa1.84□□□□□ -2.12
RNF111-211ENST00000560952 C19orf48Q6RUI8 117 aa1.84□□□□□ -2.12
RNF111-211ENST00000560952 REG3GQ6UW15 175 aa1.84□□□□□ -2.12
RNF111-211ENST00000560952 IGFL3Q6UXB1 125 aa1.84□□□□□ -2.12
RNF111-211ENST00000560952 APCDD1LQ8NCL9 501 aa1.84□□□□□ -2.12
RNF111-211ENST00000560952 ITLN1Q8WWA0 313 aa1.84□□□□□ -2.12
RNF111-211ENST00000560952 ITLN2Q8WWU7 325 aaPredicted RBP1.84□□□□□ -2.12
RNF111-211ENST00000560952 ZNF714Q96N38 554 aa1.84□□□□□ -2.12
RNF111-211ENST00000560952 TUBGCP6Q96RT7 1819 aa1.84□□□□□ -2.12
RNF111-211ENST00000560952 OPRPNQ99935 248 aaPredicted RBP1.84□□□□□ -2.12
RNF111-211ENST00000560952 SCRT1Q9BWW7 348 aa1.84□□□□□ -2.12
RNF111-211ENST00000560952 ABCA2Q9BZC7 2435 aa1.84□□□□□ -2.12
RNF111-211ENST00000560952 PTPN23Q9H3S7 1636 aa1.84□□□□□ -2.12
RNF111-211ENST00000560952 MANBALQ9NQG1 85 aa1.84□□□□□ -2.12
RNF111-211ENST00000560952 NOTCH1P46531 2555 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms