RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 WDR73Q6P4I2 378 aa9.79□□□□□ -0.84
SNX1-211ENST00000560829 ZNF418Q8TF45 676 aaPredicted RBP9.79□□□□□ -0.84
SNX1-211ENST00000560829 C4orf3Q8WVX3 66 aa9.79□□□□□ -0.84
SNX1-211ENST00000560829 ASCL2Q99929 193 aa9.79□□□□□ -0.84
SNX1-211ENST00000560829 NDFIP1Q9BT67 221 aa9.79□□□□□ -0.84
SNX1-211ENST00000560829 HOXA5P20719 270 aa9.78□□□□□ -0.84
SNX1-211ENST00000560829 CBLN1P23435 193 aa9.78□□□□□ -0.84
SNX1-211ENST00000560829 FOXA3P55318 350 aaPredicted RBP9.78□□□□□ -0.84
SNX1-211ENST00000560829 KLF5Q13887 457 aaPredicted RBP9.78□□□□□ -0.84
SNX1-211ENST00000560829 C9orf47Q6ZRZ4 202 aa9.78□□□□□ -0.84
SNX1-211ENST00000560829 ATP5L2Q7Z4Y8 100 aa9.78□□□□□ -0.84
SNX1-211ENST00000560829 OR2D3Q8NGH3 330 aa9.78□□□□□ -0.84
SNX1-211ENST00000560829 Q8TAT8 98 aa9.78□□□□□ -0.84
SNX1-211ENST00000560829 GTSF1Q8WW33 167 aa9.78□□□□□ -0.84
SNX1-211ENST00000560829 SMR3AQ99954 134 aa9.78□□□□□ -0.84
SNX1-211ENST00000560829 TLN2Q9Y4G6 2542 aa9.77□□□□□ -0.85
SNX1-211ENST00000560829 LY6G6DO95868 133 aa9.77□□□□□ -0.85
SNX1-211ENST00000560829 FRMD6-AS1P0C7T7 363 aa9.77□□□□□ -0.85
SNX1-211ENST00000560829 EDN2P20800 178 aa9.77□□□□□ -0.85
SNX1-211ENST00000560829 NDUFA6P56556 154 aa9.77□□□□□ -0.85
SNX1-211ENST00000560829 SYNJ2BPP57105 145 aa9.77□□□□□ -0.85
SNX1-211ENST00000560829 ERCC8Q13216 396 aa9.77□□□□□ -0.85
SNX1-211ENST00000560829 COA6Q5JTJ3 125 aaKnown RBP9.77□□□□□ -0.85
SNX1-211ENST00000560829 FAM162BQ5T6X4 162 aa9.77□□□□□ -0.85
SNX1-211ENST00000560829 TMEM136Q6ZRR5 245 aa9.77□□□□□ -0.85
SNX1-211ENST00000560829 C20orf173Q96LM9 149 aa9.77□□□□□ -0.85
SNX1-211ENST00000560829 GPR61Q9BZJ8 451 aa9.77□□□□□ -0.85
SNX1-211ENST00000560829 AGPAT4-IT1Q9H0P7 198 aa9.77□□□□□ -0.85
SNX1-211ENST00000560829 SNURFLB1AK76 121 aa9.76□□□□□ -0.85
SNX1-211ENST00000560829 ZNF138P52744 262 aa9.76□□□□□ -0.85
SNX1-211ENST00000560829 SMUG1Q53HV7 270 aa9.76□□□□□ -0.85
SNX1-211ENST00000560829 TCF24Q7RTU0 167 aa9.76□□□□□ -0.85
SNX1-211ENST00000560829 A0A1B0GXF2 115 aa9.76□□□□□ -0.85
SNX1-211ENST00000560829 LINC01619G3V211 115 aa9.76□□□□□ -0.85
SNX1-211ENST00000560829 OVOL1O14753 267 aa9.76□□□□□ -0.85
SNX1-211ENST00000560829 SPINK4O60575 86 aa9.76□□□□□ -0.85
SNX1-211ENST00000560829 SH2D1AO60880 128 aa9.76□□□□□ -0.85
SNX1-211ENST00000560829 SRSF2Q01130 221 aaKnown RBP9.76□□□□□ -0.85
SNX1-211ENST00000560829 TMEM78Q5T7P6 136 aa9.76□□□□□ -0.85
SNX1-211ENST00000560829 MRPL54Q6P161 138 aaKnown RBP9.76□□□□□ -0.85
SNX1-211ENST00000560829 RBPMS2Q6ZRY4 209 aaKnown RBP9.76□□□□□ -0.85
SNX1-211ENST00000560829 C18orf65Q6ZTR6 163 aa9.76□□□□□ -0.85
SNX1-211ENST00000560829 MRPL18Q9H0U6 180 aaKnown RBP9.76□□□□□ -0.85
SNX1-211ENST00000560829 LENEPQ9Y5L5 61 aa9.76□□□□□ -0.85
SNX1-211ENST00000560829 C2orf70A6NJV1 201 aa9.75□□□□□ -0.85
SNX1-211ENST00000560829 HLA-DQA1P01909 254 aa9.75□□□□□ -0.85
SNX1-211ENST00000560829 ZNF80P51504 273 aaPredicted RBP9.75□□□□□ -0.85
SNX1-211ENST00000560829 RPL11P62913 178 aaKnown RBP9.75□□□□□ -0.85
SNX1-211ENST00000560829 ZNF738Q8NE65 137 aa9.75□□□□□ -0.85
SNX1-211ENST00000560829 DCANP1Q8TF63 244 aa9.75□□□□□ -0.85
SNX1-211ENST00000560829 CUBNO60494 3623 aa9.75□□□□□ -0.85
SNX1-211ENST00000560829 Q6AWC8 147 aa9.74□□□□□ -0.85
SNX1-211ENST00000560829 LINC01006Q8NI28 216 aa9.74□□□□□ -0.85
SNX1-211ENST00000560829 LINC00477Q96M19 166 aa9.74□□□□□ -0.85
SNX1-211ENST00000560829 JMJD8Q96S16 334 aa9.74□□□□□ -0.85
SNX1-211ENST00000560829 OTOGQ6ZRI0 2925 aa9.74□□□□□ -0.85
SNX1-211ENST00000560829 SONP18583 2426 aaKnown RBP9.74□□□□□ -0.85
SNX1-211ENST00000560829 OR11H1Q8NG94 326 aa9.74□□□□□ -0.85
SNX1-211ENST00000560829 OR1N2Q8NGR9 330 aa9.74□□□□□ -0.85
SNX1-211ENST00000560829 XKRY2A2RUG3 117 aa9.73□□□□□ -0.85
SNX1-211ENST00000560829 TMEM189A5PLL7 270 aa9.73□□□□□ -0.85
SNX1-211ENST00000560829 FABP5P3A8MUU1 101 aa9.73□□□□□ -0.85
SNX1-211ENST00000560829 NDUFA7O95182 113 aa9.73□□□□□ -0.85
SNX1-211ENST00000560829 FOSL1P15407 271 aa9.73□□□□□ -0.85
SNX1-211ENST00000560829 ID1P41134 155 aa9.73□□□□□ -0.85
SNX1-211ENST00000560829 SLURP1P55000 103 aa9.73□□□□□ -0.85
SNX1-211ENST00000560829 RPS20P60866 119 aaKnown RBP9.73□□□□□ -0.85
SNX1-211ENST00000560829 DEFB136Q30KP8 78 aa9.73□□□□□ -0.85
SNX1-211ENST00000560829 ACANP16112 2415 aa9.73□□□□□ -0.85
SNX1-211ENST00000560829 TRBV7-9A0A0J9YWB2 115 aa9.72□□□□□ -0.85
SNX1-211ENST00000560829 GZMBP10144 247 aa9.72□□□□□ -0.85
SNX1-211ENST00000560829 HBBP68871 147 aa9.72□□□□□ -0.85
SNX1-211ENST00000560829 GDF5OSQ5U4N7 250 aa9.72□□□□□ -0.85
SNX1-211ENST00000560829 ADAMTSL5Q6ZMM2 481 aa9.72□□□□□ -0.85
SNX1-211ENST00000560829 HIST3H2BBQ8N257 126 aa9.72□□□□□ -0.85
SNX1-211ENST00000560829 KLHL30-AS1Q8NEE0 82 aa9.72□□□□□ -0.85
SNX1-211ENST00000560829 OR10J6PQ8NGY7 276 aa9.72□□□□□ -0.85
SNX1-211ENST00000560829 DPF1Q92782 380 aa9.72□□□□□ -0.85
SNX1-211ENST00000560829 PGLYRP4Q96LB8 373 aa9.72□□□□□ -0.85
SNX1-211ENST00000560829 MS4A6AQ9H2W1 248 aa9.72□□□□□ -0.85
SNX1-211ENST00000560829 IGKV3-7A0A075B6H7 116 aa9.72□□□□□ -0.85
SNX1-211ENST00000560829 IFITM10A6NMD0 228 aa9.72□□□□□ -0.85
SNX1-211ENST00000560829 M0QZ24 198 aa9.72□□□□□ -0.85
SNX1-211ENST00000560829 HAX1O00165 279 aa9.72□□□□□ -0.85
SNX1-211ENST00000560829 HIST1H1AQ02539 215 aaPredicted RBP9.72□□□□□ -0.85
SNX1-211ENST00000560829 LINC01559Q495D7 138 aa9.72□□□□□ -0.85
SNX1-211ENST00000560829 KHDC1LQ5JSQ8 128 aa9.72□□□□□ -0.85
SNX1-211ENST00000560829 OR8A1Q8NGG7 326 aa9.72□□□□□ -0.85
SNX1-211ENST00000560829 FAM19A4Q96LR4 140 aa9.72□□□□□ -0.85
SNX1-211ENST00000560829 PEMTQ9UBM1 199 aa9.72□□□□□ -0.85
SNX1-211ENST00000560829 MYO9AB2RTY4 2548 aa9.71□□□□□ -0.85
SNX1-211ENST00000560829 K7EQG2 157 aa9.71□□□□□ -0.85
SNX1-211ENST00000560829 S100A8P05109 93 aa9.71□□□□□ -0.85
SNX1-211ENST00000560829 AKR1D1P51857 326 aa9.71□□□□□ -0.85
SNX1-211ENST00000560829 RAB4BP61018 213 aa9.71□□□□□ -0.85
SNX1-211ENST00000560829 FHL3Q13643 280 aa9.71□□□□□ -0.85
SNX1-211ENST00000560829 GFI1BQ5VTD9 330 aa9.71□□□□□ -0.85
SNX1-211ENST00000560829 A0A1B0GUT8 65 aa9.7□□□□□ -0.86
SNX1-211ENST00000560829 A0A1B0GW15 77 aa9.7□□□□□ -0.86
SNX1-211ENST00000560829 APCSP02743 223 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms