RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 NKX2-5P52952 324 aaPredicted RBP7.22□□□□□ -1.25
CDC42BPB-207ENST00000560492 KIR3DS1Q14943 382 aa7.22□□□□□ -1.25
CDC42BPB-207ENST00000560492 CDPF1Q6NVV7 123 aa7.22□□□□□ -1.25
CDC42BPB-207ENST00000560492 C18orf15Q96N68 181 aa7.22□□□□□ -1.25
CDC42BPB-207ENST00000560492 C20orf144Q9BQM9 153 aa7.22□□□□□ -1.25
CDC42BPB-207ENST00000560492 ARL6Q9H0F7 186 aa7.22□□□□□ -1.25
CDC42BPB-207ENST00000560492 MDFICQ9P1T7 246 aa7.22□□□□□ -1.25
CDC42BPB-207ENST00000560492 LSM5Q9Y4Y9 91 aaKnown RBP7.22□□□□□ -1.25
CDC42BPB-207ENST00000560492 TRAV12-3A0A0B4J271 114 aa7.21□□□□□ -1.26
CDC42BPB-207ENST00000560492 PMS2P5A8MQ11 134 aa7.21□□□□□ -1.26
CDC42BPB-207ENST00000560492 H3BNG1 76 aa7.21□□□□□ -1.26
CDC42BPB-207ENST00000560492 L7N2F9 121 aa7.21□□□□□ -1.26
CDC42BPB-207ENST00000560492 NXPH4O95158 308 aa7.21□□□□□ -1.26
CDC42BPB-207ENST00000560492 MPC2O95563 127 aa7.21□□□□□ -1.26
CDC42BPB-207ENST00000560492 DNAH10OSP0CZ25 163 aa7.21□□□□□ -1.26
CDC42BPB-207ENST00000560492 PVALBP20472 110 aaPredicted RBP7.21□□□□□ -1.26
CDC42BPB-207ENST00000560492 XGP55808 180 aa7.21□□□□□ -1.26
CDC42BPB-207ENST00000560492 VAMP2P63027 116 aa7.21□□□□□ -1.26
CDC42BPB-207ENST00000560492 RAB32Q13637 225 aa7.21□□□□□ -1.26
CDC42BPB-207ENST00000560492 GFI1BQ5VTD9 330 aa7.21□□□□□ -1.26
CDC42BPB-207ENST00000560492 LCN15Q6UWW0 184 aa7.21□□□□□ -1.26
CDC42BPB-207ENST00000560492 Q6ZTI0 123 aa7.21□□□□□ -1.26
CDC42BPB-207ENST00000560492 INO80EQ8NBZ0 244 aaPredicted RBP7.21□□□□□ -1.26
CDC42BPB-207ENST00000560492 MBD2Q9UBB5 411 aa7.21□□□□□ -1.26
CDC42BPB-207ENST00000560492 RNF24Q9Y225 148 aa7.21□□□□□ -1.26
CDC42BPB-207ENST00000560492 TNFRSF18Q9Y5U5 241 aa7.21□□□□□ -1.26
CDC42BPB-207ENST00000560492 A0A087X0K7 114 aa7.2□□□□□ -1.26
CDC42BPB-207ENST00000560492 A0A096LPF7 62 aa7.2□□□□□ -1.26
CDC42BPB-207ENST00000560492 TRGV1A0A0A0MS02 117 aa7.2□□□□□ -1.26
CDC42BPB-207ENST00000560492 PRSS46E5RG02 174 aa7.2□□□□□ -1.26
CDC42BPB-207ENST00000560492 H3BTX0 84 aa7.2□□□□□ -1.26
CDC42BPB-207ENST00000560492 ARPC5O15511 151 aa7.2□□□□□ -1.26
CDC42BPB-207ENST00000560492 SSSCA1O60232 199 aa7.2□□□□□ -1.26
CDC42BPB-207ENST00000560492 PITX3O75364 302 aa7.2□□□□□ -1.26
CDC42BPB-207ENST00000560492 MBPP02686 304 aaPredicted RBP7.2□□□□□ -1.26
CDC42BPB-207ENST00000560492 HAMPP81172 84 aa7.2□□□□□ -1.26
CDC42BPB-207ENST00000560492 ICAM4Q14773 271 aa7.2□□□□□ -1.26
CDC42BPB-207ENST00000560492 Q5BKY6 102 aa7.2□□□□□ -1.26
CDC42BPB-207ENST00000560492 ZNF546Q86UE3 836 aa7.2□□□□□ -1.26
CDC42BPB-207ENST00000560492 NFE4Q86UQ8 179 aa7.2□□□□□ -1.26
CDC42BPB-207ENST00000560492 SLC50A1Q9BRV3 221 aa7.2□□□□□ -1.26
CDC42BPB-207ENST00000560492 RCL1Q9Y2P8 373 aaKnown RBP7.2□□□□□ -1.26
CDC42BPB-207ENST00000560492 HSPB11Q9Y547 144 aa7.2□□□□□ -1.26
CDC42BPB-207ENST00000560492 ICOSQ9Y6W8 199 aa7.2□□□□□ -1.26
CDC42BPB-207ENST00000560492 HMSDA8MTL9 139 aa7.19□□□□□ -1.26
CDC42BPB-207ENST00000560492 E5RGE8 158 aa7.19□□□□□ -1.26
CDC42BPB-207ENST00000560492 G3V3Q6 166 aa7.19□□□□□ -1.26
CDC42BPB-207ENST00000560492 K7EPK0 472 aa7.19□□□□□ -1.26
CDC42BPB-207ENST00000560492 IGHV3-53P01767 116 aa7.19□□□□□ -1.26
CDC42BPB-207ENST00000560492 LEPP41159 167 aa7.19□□□□□ -1.26
CDC42BPB-207ENST00000560492 SELENOTP62341 195 aa7.19□□□□□ -1.26
CDC42BPB-207ENST00000560492 Q6ZRN7 208 aaPredicted RBP7.19□□□□□ -1.26
CDC42BPB-207ENST00000560492 LINC00612Q8N6U2 182 aa7.19□□□□□ -1.26
CDC42BPB-207ENST00000560492 OR11H4Q8NGC9 324 aa7.19□□□□□ -1.26
CDC42BPB-207ENST00000560492 ARV1Q9H2C2 271 aa7.19□□□□□ -1.26
CDC42BPB-207ENST00000560492 ZNF331Q9NQX6 463 aaPredicted RBP7.19□□□□□ -1.26
CDC42BPB-207ENST00000560492 PSENENQ9NZ42 101 aa7.19□□□□□ -1.26
CDC42BPB-207ENST00000560492 FUT9Q9Y231 359 aa7.19□□□□□ -1.26
CDC42BPB-207ENST00000560492 TRAV9-2A0A087WT02 112 aa7.18□□□□□ -1.26
CDC42BPB-207ENST00000560492 COX7A2P2O60397 106 aa7.18□□□□□ -1.26
CDC42BPB-207ENST00000560492 TSC22D2O75157 780 aa7.18□□□□□ -1.26
CDC42BPB-207ENST00000560492 CXCL2P19875 107 aa7.18□□□□□ -1.26
CDC42BPB-207ENST00000560492 KRTAP10-1P60331 282 aa7.18□□□□□ -1.26
CDC42BPB-207ENST00000560492 POLR2GP62487 172 aaKnown RBP eCLIP7.18□□□□□ -1.26
CDC42BPB-207ENST00000560492 SLC38A11Q08AI6 406 aa7.18□□□□□ -1.26
CDC42BPB-207ENST00000560492 Q6ZSN1 163 aa7.18□□□□□ -1.26
CDC42BPB-207ENST00000560492 LINC00305Q7Z4B0 112 aa7.18□□□□□ -1.26
CDC42BPB-207ENST00000560492 BPIFA4PQ86YQ2 179 aa7.18□□□□□ -1.26
CDC42BPB-207ENST00000560492 C9orf62Q8N4C0 152 aa7.18□□□□□ -1.26
CDC42BPB-207ENST00000560492 VSIG2Q96IQ7 327 aa7.18□□□□□ -1.26
CDC42BPB-207ENST00000560492 PYGO2Q9BRQ0 406 aa7.18□□□□□ -1.26
CDC42BPB-207ENST00000560492 GSN-AS1Q9NRJ2 163 aa7.18□□□□□ -1.26
CDC42BPB-207ENST00000560492 OR5AC2Q9NZP5 309 aa7.18□□□□□ -1.26
CDC42BPB-207ENST00000560492 FLG2Q5D862 2391 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPB-207ENST00000560492 A0A087WTM6 91 aa7.17□□□□□ -1.26
CDC42BPB-207ENST00000560492 A0A0D9SG52 128 aa7.17□□□□□ -1.26
CDC42BPB-207ENST00000560492 PRAC2D3DTV9 90 aa7.17□□□□□ -1.26
CDC42BPB-207ENST00000560492 GCSHP23434 173 aa7.17□□□□□ -1.26
CDC42BPB-207ENST00000560492 CAV2P51636 162 aa7.17□□□□□ -1.26
CDC42BPB-207ENST00000560492 IL15RAQ13261 267 aa7.17□□□□□ -1.26
CDC42BPB-207ENST00000560492 ZNF680Q8NEM1 530 aa7.17□□□□□ -1.26
CDC42BPB-207ENST00000560492 NPVFQ9HCQ7 196 aa7.17□□□□□ -1.26
CDC42BPB-207ENST00000560492 TNFSF18Q9UNG2 199 aa7.17□□□□□ -1.26
CDC42BPB-207ENST00000560492 PXMP4Q9Y6I8 212 aa7.17□□□□□ -1.26
CDC42BPB-207ENST00000560492 LY96Q9Y6Y9 160 aa7.17□□□□□ -1.26
CDC42BPB-207ENST00000560492 KANTRA0A1W2PQU2 76 aa7.16□□□□□ -1.26
CDC42BPB-207ENST00000560492 NPIPB6E9PJ23 425 aa7.16□□□□□ -1.26
CDC42BPB-207ENST00000560492 H0YIZ8 118 aa7.16□□□□□ -1.26
CDC42BPB-207ENST00000560492 SLC17A3O00476 420 aa7.16□□□□□ -1.26
CDC42BPB-207ENST00000560492 PSCAO43653 123 aa7.16□□□□□ -1.26
CDC42BPB-207ENST00000560492 METTL15P1P0C7V9 234 aa7.16□□□□□ -1.26
CDC42BPB-207ENST00000560492 PLP1P60201 277 aa7.16□□□□□ -1.26
CDC42BPB-207ENST00000560492 ID3Q02535 119 aa7.16□□□□□ -1.26
CDC42BPB-207ENST00000560492 DAZ2Q13117 558 aaKnown RBP7.16□□□□□ -1.26
CDC42BPB-207ENST00000560492 ZNF345Q14585 488 aa7.16□□□□□ -1.26
CDC42BPB-207ENST00000560492 TEPPQ6URK8 271 aa7.16□□□□□ -1.26
CDC42BPB-207ENST00000560492 PATE2Q6UY27 113 aa7.16□□□□□ -1.26
CDC42BPB-207ENST00000560492 STX12Q86Y82 276 aa7.16□□□□□ -1.26
CDC42BPB-207ENST00000560492 OR10P1Q8NGE3 313 aa7.16□□□□□ -1.26
CDC42BPB-207ENST00000560492 SLC25A31Q9H0C2 315 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms