RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 MAST4O15021 2626 aa11.17□□□□□ -0.62
RABGGTA-212ENST00000559974 HSBP1O75506 76 aa11.16□□□□□ -0.62
RABGGTA-212ENST00000559974 NTF3P20783 257 aa11.16□□□□□ -0.62
RABGGTA-212ENST00000559974 HLA-DMBP28068 263 aa11.16□□□□□ -0.62
RABGGTA-212ENST00000559974 RIGQ13278 110 aa11.16□□□□□ -0.62
RABGGTA-212ENST00000559974 IGFL4Q6B9Z1 124 aa11.16□□□□□ -0.62
RABGGTA-212ENST00000559974 PRR25Q96S07 402 aa11.16□□□□□ -0.62
RABGGTA-212ENST00000559974 NDUFAF3Q9BU61 184 aa11.16□□□□□ -0.62
RABGGTA-212ENST00000559974 LINC00527Q9UJ94 153 aa11.16□□□□□ -0.62
RABGGTA-212ENST00000559974 LOC102724200A0A096LPH7 203 aaPredicted RBP11.16□□□□□ -0.62
RABGGTA-212ENST00000559974 ARMS2P0C7Q2 107 aa11.16□□□□□ -0.62
RABGGTA-212ENST00000559974 FAM162BQ5T6X4 162 aa11.16□□□□□ -0.62
RABGGTA-212ENST00000559974 METTL26Q96S19 204 aa11.16□□□□□ -0.62
RABGGTA-212ENST00000559974 CUBNO60494 3623 aa11.15□□□□□ -0.62
RABGGTA-212ENST00000559974 A0A1B0GW15 77 aa11.15□□□□□ -0.62
RABGGTA-212ENST00000559974 H3BUX3 64 aa11.15□□□□□ -0.62
RABGGTA-212ENST00000559974 SH2D1AO60880 128 aa11.15□□□□□ -0.62
RABGGTA-212ENST00000559974 IGF1P05019 195 aa11.15□□□□□ -0.62
RABGGTA-212ENST00000559974 LY6EQ16553 131 aa11.15□□□□□ -0.62
RABGGTA-212ENST00000559974 LCN12Q6JVE5 192 aa11.15□□□□□ -0.62
RABGGTA-212ENST00000559974 RNASEKQ6P5S7 137 aaKnown RBP11.15□□□□□ -0.62
RABGGTA-212ENST00000559974 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.15□□□□□ -0.62
RABGGTA-212ENST00000559974 VGLL1Q99990 258 aa11.15□□□□□ -0.62
RABGGTA-212ENST00000559974 SLC50A1Q9BRV3 221 aa11.15□□□□□ -0.62
RABGGTA-212ENST00000559974 NDFIP1Q9BT67 221 aa11.15□□□□□ -0.62
RABGGTA-212ENST00000559974 TMEM189A5PLL7 270 aa11.14□□□□□ -0.63
RABGGTA-212ENST00000559974 A6NDX4 124 aa11.14□□□□□ -0.63
RABGGTA-212ENST00000559974 B4DSR2 109 aa11.14□□□□□ -0.63
RABGGTA-212ENST00000559974 TRGV3P03979 118 aa11.14□□□□□ -0.63
RABGGTA-212ENST00000559974 Q8N976 141 aa11.14□□□□□ -0.63
RABGGTA-212ENST00000559974 GATD1Q8NB37 220 aa11.14□□□□□ -0.63
RABGGTA-212ENST00000559974 Q8TAT8 98 aa11.14□□□□□ -0.63
RABGGTA-212ENST00000559974 BORCS7Q96B45 105 aa11.14□□□□□ -0.63
RABGGTA-212ENST00000559974 HIF1ANQ9NWT6 349 aa11.14□□□□□ -0.63
RABGGTA-212ENST00000559974 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.14□□□□□ -0.63
RABGGTA-212ENST00000559974 IGHV3-66A0A0C4DH42 116 aa11.14□□□□□ -0.63
RABGGTA-212ENST00000559974 LOXL1Q08397 574 aaPredicted RBP11.14□□□□□ -0.63
RABGGTA-212ENST00000559974 SMR3AQ99954 134 aa11.14□□□□□ -0.63
RABGGTA-212ENST00000559974 M0QZK8 103 aa11.13□□□□□ -0.63
RABGGTA-212ENST00000559974 IGHG2P01859 326 aa11.13□□□□□ -0.63
RABGGTA-212ENST00000559974 C3orf79P0CE67 100 aa11.13□□□□□ -0.63
RABGGTA-212ENST00000559974 IGHV4-31P0DP07 118 aa11.13□□□□□ -0.63
RABGGTA-212ENST00000559974 TDRG1Q3Y452 100 aa11.13□□□□□ -0.63
RABGGTA-212ENST00000559974 URB1-AS1Q96HZ7 61 aa11.13□□□□□ -0.63
RABGGTA-212ENST00000559974 VAMP8Q9BV40 100 aa11.13□□□□□ -0.63
RABGGTA-212ENST00000559974 TPPP3Q9BW30 176 aa11.13□□□□□ -0.63
RABGGTA-212ENST00000559974 U3KQE9 123 aa11.13□□□□□ -0.63
RABGGTA-212ENST00000559974 SONP18583 2426 aaKnown RBP11.13□□□□□ -0.63
RABGGTA-212ENST00000559974 IGHV3OR16-13A0A075B7E8 117 aa11.12□□□□□ -0.63
RABGGTA-212ENST00000559974 IGHV3-74A0A0B4J1X5 117 aa11.12□□□□□ -0.63
RABGGTA-212ENST00000559974 M0R2Z0 102 aa11.12□□□□□ -0.63
RABGGTA-212ENST00000559974 BRI3O95415 125 aa11.12□□□□□ -0.63
RABGGTA-212ENST00000559974 RBAKDNA6NC62 111 aa11.12□□□□□ -0.63
RABGGTA-212ENST00000559974 H3BUA1 57 aa11.12□□□□□ -0.63
RABGGTA-212ENST00000559974 ZNF207O43670 478 aaKnown RBP11.12□□□□□ -0.63
RABGGTA-212ENST00000559974 GATA3P23771 443 aa11.12□□□□□ -0.63
RABGGTA-212ENST00000559974 PPIFP30405 207 aaKnown RBP11.12□□□□□ -0.63
RABGGTA-212ENST00000559974 BMI1P35226 326 aa11.12□□□□□ -0.63
RABGGTA-212ENST00000559974 ARL3P36405 182 aa11.12□□□□□ -0.63
RABGGTA-212ENST00000559974 KRTAP1-1Q07627 177 aa11.12□□□□□ -0.63
RABGGTA-212ENST00000559974 RNF182Q8N6D2 247 aa11.12□□□□□ -0.63
RABGGTA-212ENST00000559974 CHCHD1Q96BP2 118 aaKnown RBP11.12□□□□□ -0.63
RABGGTA-212ENST00000559974 C20orf144Q9BQM9 153 aa11.12□□□□□ -0.63
RABGGTA-212ENST00000559974 TMSB15BA0A087X1C1 80 aa11.11□□□□□ -0.63
RABGGTA-212ENST00000559974 IGHV3-49A0A0A0MS15 119 aa11.11□□□□□ -0.63
RABGGTA-212ENST00000559974 FAM181BA6NEQ2 426 aa11.11□□□□□ -0.63
RABGGTA-212ENST00000559974 PRAC2D3DTV9 90 aa11.11□□□□□ -0.63
RABGGTA-212ENST00000559974 ZNF80P51504 273 aaPredicted RBP11.11□□□□□ -0.63
RABGGTA-212ENST00000559974 RPS20P60866 119 aaKnown RBP11.11□□□□□ -0.63
RABGGTA-212ENST00000559974 PAM16Q9Y3D7 125 aa11.11□□□□□ -0.63
RABGGTA-212ENST00000559974 AVPP01185 164 aa11.1□□□□□ -0.63
RABGGTA-212ENST00000559974 LYZL1Q6UWQ5 148 aa11.1□□□□□ -0.63
RABGGTA-212ENST00000559974 M0QZ24 198 aa11.1□□□□□ -0.63
RABGGTA-212ENST00000559974 ERCC8Q13216 396 aa11.1□□□□□ -0.63
RABGGTA-212ENST00000559974 ZNF493Q6ZR52 646 aa11.1□□□□□ -0.63
RABGGTA-212ENST00000559974 C8orf86Q6ZUL3 223 aa11.1□□□□□ -0.63
RABGGTA-212ENST00000559974 USMG5Q96IX5 58 aa11.1□□□□□ -0.63
RABGGTA-212ENST00000559974 TRAV8-2A0A0B4J237 113 aa11.09□□□□□ -0.63
RABGGTA-212ENST00000559974 TGFAP01135 160 aa11.09□□□□□ -0.63
RABGGTA-212ENST00000559974 BLCAPP62952 87 aa11.09□□□□□ -0.63
RABGGTA-212ENST00000559974 SRSF2Q01130 221 aaKnown RBP11.09□□□□□ -0.63
RABGGTA-212ENST00000559974 MRPL53Q96EL3 112 aaKnown RBP11.09□□□□□ -0.63
RABGGTA-212ENST00000559974 TRBV12-3P01733 135 aa11.08□□□□□ -0.64
RABGGTA-212ENST00000559974 LINC00614P0C842 121 aa11.08□□□□□ -0.64
RABGGTA-212ENST00000559974 DMRTA1Q5VZB9 504 aa11.08□□□□□ -0.64
RABGGTA-212ENST00000559974 NDUFA4O00483 81 aa11.08□□□□□ -0.64
RABGGTA-212ENST00000559974 CTRLP40313 264 aa11.08□□□□□ -0.64
RABGGTA-212ENST00000559974 LBHQ53QV2 105 aaPredicted RBP11.08□□□□□ -0.64
RABGGTA-212ENST00000559974 EBLN2Q6P2I7 272 aa11.08□□□□□ -0.64
RABGGTA-212ENST00000559974 LURAP1LQ8IV03 231 aa11.08□□□□□ -0.64
RABGGTA-212ENST00000559974 LINC01356Q8N9X3 169 aa11.08□□□□□ -0.64
RABGGTA-212ENST00000559974 GLMPQ8WWB7 406 aa11.08□□□□□ -0.64
RABGGTA-212ENST00000559974 TEP1Q99973 2627 aaKnown RBP11.07□□□□□ -0.64
RABGGTA-212ENST00000559974 IGHV1-24A0A0C4DH33 117 aa11.07□□□□□ -0.64
RABGGTA-212ENST00000559974 C2orf70A6NJV1 201 aa11.07□□□□□ -0.64
RABGGTA-212ENST00000559974 FABP5P3A8MUU1 101 aa11.07□□□□□ -0.64
RABGGTA-212ENST00000559974 BTF3P20290 206 aaKnown RBP11.07□□□□□ -0.64
RABGGTA-212ENST00000559974 RAB4AP20338 218 aa11.07□□□□□ -0.64
RABGGTA-212ENST00000559974 IL17RELQ6ZVW7 336 aa11.07□□□□□ -0.64
RABGGTA-212ENST00000559974 FER1L6-AS1Q8NA97 138 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms