RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 USP9YO00507 2555 aaPredicted RBP12.2□□□□□ -0.46
USP8-208ENST00000559329 POLQO75417 2590 aa12.2□□□□□ -0.46
USP8-208ENST00000559329 IGHV4-59P01825 116 aa12.19□□□□□ -0.46
USP8-208ENST00000559329 ERCC8Q13216 396 aa12.19□□□□□ -0.46
USP8-208ENST00000559329 KIR2DL5BA0A0G2JN68 375 aa12.19□□□□□ -0.46
USP8-208ENST00000559329 KIR2DL5BA0A0G2JPC4 375 aa12.19□□□□□ -0.46
USP8-208ENST00000559329 TGFAP01135 160 aa12.19□□□□□ -0.46
USP8-208ENST00000559329 PF4V1P10720 104 aa12.19□□□□□ -0.46
USP8-208ENST00000559329 BMI1P35226 326 aa12.19□□□□□ -0.46
USP8-208ENST00000559329 ZNF493Q6ZR52 646 aa12.19□□□□□ -0.46
USP8-208ENST00000559329 KIR2DL5AQ8N109 375 aa12.19□□□□□ -0.46
USP8-208ENST00000559329 FAM19A2Q8N3H0 131 aa12.19□□□□□ -0.46
USP8-208ENST00000559329 MAPK1IP1LQ8NDC0 245 aa12.19□□□□□ -0.46
USP8-208ENST00000559329 BEX4Q9NWD9 120 aaPredicted RBP12.19□□□□□ -0.46
USP8-208ENST00000559329 IGHV3-11P01762 117 aa12.18□□□□□ -0.46
USP8-208ENST00000559329 PTPN13Q12923 2485 aa12.18□□□□□ -0.46
USP8-208ENST00000559329 CENPEQ02224 2701 aa12.18□□□□□ -0.46
USP8-208ENST00000559329 A0A0G2JLM5 398 aa12.17□□□□□ -0.46
USP8-208ENST00000559329 RNF223E7ERA6 249 aa12.17□□□□□ -0.46
USP8-208ENST00000559329 SMAD7O15105 426 aaKnown RBP12.17□□□□□ -0.46
USP8-208ENST00000559329 IGHV4-31P0DP07 118 aa12.17□□□□□ -0.46
USP8-208ENST00000559329 CTRLP40313 264 aa12.17□□□□□ -0.46
USP8-208ENST00000559329 RPS20P60866 119 aaKnown RBP12.17□□□□□ -0.46
USP8-208ENST00000559329 LYZL1Q6UWQ5 148 aa12.17□□□□□ -0.46
USP8-208ENST00000559329 GPHB5Q86YW7 130 aa12.17□□□□□ -0.46
USP8-208ENST00000559329 LRRC75A-AS1Q8N1F1 130 aa12.17□□□□□ -0.46
USP8-208ENST00000559329 OR4X2Q8NGF9 303 aa12.17□□□□□ -0.46
USP8-208ENST00000559329 AGPAT4-IT1Q9H0P7 198 aa12.17□□□□□ -0.46
USP8-208ENST00000559329 CLEC5AQ9NY25 188 aa12.17□□□□□ -0.46
USP8-208ENST00000559329 CSPG4Q6UVK1 2322 aa12.17□□□□□ -0.46
USP8-208ENST00000559329 TMSB15BA0A087X1C1 80 aa12.17□□□□□ -0.46
USP8-208ENST00000559329 HSBP1O75506 76 aa12.17□□□□□ -0.46
USP8-208ENST00000559329 IGLC6P0CF74 106 aa12.17□□□□□ -0.46
USP8-208ENST00000559329 ZNF705DP0CH99 300 aaPredicted RBP12.17□□□□□ -0.46
USP8-208ENST00000559329 ZNF705BP0CI00 300 aaPredicted RBP12.17□□□□□ -0.46
USP8-208ENST00000559329 DEFB113Q30KQ7 82 aa12.17□□□□□ -0.46
USP8-208ENST00000559329 C9orf139Q6ZV77 190 aa12.17□□□□□ -0.46
USP8-208ENST00000559329 C14orf144Q96I85 54 aa12.17□□□□□ -0.46
USP8-208ENST00000559329 CR1P17927 2039 aa12.16□□□□□ -0.46
USP8-208ENST00000559329 KRTDAPP60985 99 aa12.16□□□□□ -0.46
USP8-208ENST00000559329 DEFA6Q01524 100 aa12.16□□□□□ -0.46
USP8-208ENST00000559329 TMEM95Q3KNT9 176 aa12.16□□□□□ -0.46
USP8-208ENST00000559329 FAM209BQ5JX69 171 aa12.16□□□□□ -0.46
USP8-208ENST00000559329 RNASEKQ6P5S7 137 aaKnown RBP12.16□□□□□ -0.46
USP8-208ENST00000559329 C9orf47Q6ZRZ4 202 aa12.16□□□□□ -0.46
USP8-208ENST00000559329 LCNL1Q6ZST4 164 aa12.16□□□□□ -0.46
USP8-208ENST00000559329 IL17RELQ6ZVW7 336 aa12.16□□□□□ -0.46
USP8-208ENST00000559329 PPP1R14DQ9NXH3 145 aa12.16□□□□□ -0.46
USP8-208ENST00000559329 SOCS3O14543 225 aa12.15□□□□□ -0.46
USP8-208ENST00000559329 C3orf79P0CE67 100 aa12.15□□□□□ -0.46
USP8-208ENST00000559329 DMRTA1Q5VZB9 504 aa12.15□□□□□ -0.46
USP8-208ENST00000559329 REC114Q7Z4M0 266 aa12.15□□□□□ -0.46
USP8-208ENST00000559329 BORCS7Q96B45 105 aa12.15□□□□□ -0.46
USP8-208ENST00000559329 CHCHD1Q96BP2 118 aaKnown RBP12.15□□□□□ -0.46
USP8-208ENST00000559329 TPPP3Q9BW30 176 aa12.15□□□□□ -0.46
USP8-208ENST00000559329 FABP5P3A8MUU1 101 aa12.15□□□□□ -0.46
USP8-208ENST00000559329 NTF3P20783 257 aa12.15□□□□□ -0.46
USP8-208ENST00000559329 PSMB8P28062 276 aa12.15□□□□□ -0.46
USP8-208ENST00000559329 LINC01559Q495D7 138 aa12.15□□□□□ -0.46
USP8-208ENST00000559329 NPFFR1Q9GZQ6 430 aa12.15□□□□□ -0.46
USP8-208ENST00000559329 ZANQ9Y493 2812 aa12.15□□□□□ -0.47
USP8-208ENST00000559329 ZNF138P52744 262 aa12.14□□□□□ -0.47
USP8-208ENST00000559329 TDRG1Q3Y452 100 aa12.14□□□□□ -0.47
USP8-208ENST00000559329 C20orf173Q96LM9 149 aa12.14□□□□□ -0.47
USP8-208ENST00000559329 FAM181BA6NEQ2 426 aa12.13□□□□□ -0.47
USP8-208ENST00000559329 M0QZ24 198 aa12.13□□□□□ -0.47
USP8-208ENST00000559329 M0R2Z0 102 aa12.13□□□□□ -0.47
USP8-208ENST00000559329 Q5PR19 223 aa12.13□□□□□ -0.47
USP8-208ENST00000559329 FER1L6-AS1Q8NA97 138 aa12.13□□□□□ -0.47
USP8-208ENST00000559329 C16orf92Q96LL3 132 aa12.13□□□□□ -0.47
USP8-208ENST00000559329 NDUFAF3Q9BU61 184 aa12.13□□□□□ -0.47
USP8-208ENST00000559329 CNFNQ9BYD5 112 aa12.13□□□□□ -0.47
USP8-208ENST00000559329 TMEM213A2RRL7 107 aa12.13□□□□□ -0.47
USP8-208ENST00000559329 TMEM89A2RUT3 159 aa12.13□□□□□ -0.47
USP8-208ENST00000559329 TMEM78Q5T7P6 136 aa12.13□□□□□ -0.47
USP8-208ENST00000559329 PRRC2AP48634 2157 aaKnown RBP12.12□□□□□ -0.47
USP8-208ENST00000559329 IGHV7-4-1A0A0J9YVY3 117 aa12.12□□□□□ -0.47
USP8-208ENST00000559329 Q6YL49 198 aa12.12□□□□□ -0.47
USP8-208ENST00000559329 KRTAP1-3Q8IUG1 177 aa12.12□□□□□ -0.47
USP8-208ENST00000559329 C20orf144Q9BQM9 153 aa12.12□□□□□ -0.47
USP8-208ENST00000559329 VPREB3Q9UKI3 123 aa12.12□□□□□ -0.47
USP8-208ENST00000559329 U3KQK5 164 aa12.12□□□□□ -0.47
USP8-208ENST00000559329 NAV2Q8IVL1 2488 aa12.12□□□□□ -0.47
USP8-208ENST00000559329 ORM1P02763 201 aa12.11□□□□□ -0.47
USP8-208ENST00000559329 LINC00614P0C842 121 aa12.11□□□□□ -0.47
USP8-208ENST00000559329 HIST1H1AQ02539 215 aaPredicted RBP12.11□□□□□ -0.47
USP8-208ENST00000559329 FAM104BQ5XKR9 115 aa12.11□□□□□ -0.47
USP8-208ENST00000559329 EBLN2Q6P2I7 272 aa12.11□□□□□ -0.47
USP8-208ENST00000559329 PEF1Q9UBV8 284 aaKnown RBP12.11□□□□□ -0.47
USP8-208ENST00000559329 ABCA12Q86UK0 2595 aa12.11□□□□□ -0.47
USP8-208ENST00000559329 IGHV1-24A0A0C4DH33 117 aa12.11□□□□□ -0.47
USP8-208ENST00000559329 C2orf70A6NJV1 201 aa12.11□□□□□ -0.47
USP8-208ENST00000559329 DAZ1Q9NQZ3 744 aaKnown RBP12.11□□□□□ -0.47
USP8-208ENST00000559329 C11orf21Q9P2W6 132 aa12.11□□□□□ -0.47
USP8-208ENST00000559329 IGKV3D-20A0A0C4DH25 116 aa12.1□□□□□ -0.47
USP8-208ENST00000559329 K7EMT4 169 aa12.1□□□□□ -0.47
USP8-208ENST00000559329 CYB5R2Q6BCY4 276 aa12.1□□□□□ -0.47
USP8-208ENST00000559329 LENEPQ9Y5L5 61 aa12.1□□□□□ -0.47
USP8-208ENST00000559329 TM4SF20Q53R12 229 aa12.09□□□□□ -0.47
USP8-208ENST00000559329 C10orf99Q6UWK7 81 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms