RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 CRISP2P16562 243 aa10.83□□□□□ -0.68
SNRPA1-207ENST00000559309 GNG5P63218 68 aa10.83□□□□□ -0.68
SNRPA1-207ENST00000559309 MEF2BQ02080 365 aaPredicted RBP10.83□□□□□ -0.68
SNRPA1-207ENST00000559309 ZNF506Q5JVG8 444 aa10.83□□□□□ -0.68
SNRPA1-207ENST00000559309 MORN3Q6PF18 240 aaPredicted RBP10.83□□□□□ -0.68
SNRPA1-207ENST00000559309 PCNPQ8WW12 178 aaKnown RBP10.83□□□□□ -0.68
SNRPA1-207ENST00000559309 ZNF492Q9P255 531 aa10.83□□□□□ -0.68
SNRPA1-207ENST00000559309 GNG13Q9P2W3 67 aa10.83□□□□□ -0.68
SNRPA1-207ENST00000559309 LENEPQ9Y5L5 61 aa10.83□□□□□ -0.68
SNRPA1-207ENST00000559309 FBLL1A6NHQ2 334 aaKnown RBP10.82□□□□□ -0.68
SNRPA1-207ENST00000559309 C11orf94C9JXX5 98 aa10.82□□□□□ -0.68
SNRPA1-207ENST00000559309 PRB4P10163 310 aaPredicted RBP10.82□□□□□ -0.68
SNRPA1-207ENST00000559309 CSN1S1P47710 185 aa10.82□□□□□ -0.68
SNRPA1-207ENST00000559309 HIST1H1AQ02539 215 aaPredicted RBP10.82□□□□□ -0.68
SNRPA1-207ENST00000559309 HAGHQ16775 308 aa10.82□□□□□ -0.68
SNRPA1-207ENST00000559309 COX8CQ7Z4L0 72 aa10.82□□□□□ -0.68
SNRPA1-207ENST00000559309 CYB561D1Q8N8Q1 229 aa10.82□□□□□ -0.68
SNRPA1-207ENST00000559309 TMEM75Q8N9X5 138 aa10.82□□□□□ -0.68
SNRPA1-207ENST00000559309 OR10J6PQ8NGY7 276 aa10.82□□□□□ -0.68
SNRPA1-207ENST00000559309 MRAPQ8TCY5 172 aa10.82□□□□□ -0.68
SNRPA1-207ENST00000559309 B9D2Q9BPU9 175 aa10.82□□□□□ -0.68
SNRPA1-207ENST00000559309 CSTL1Q9H114 145 aa10.82□□□□□ -0.68
SNRPA1-207ENST00000559309 TUBA4BQ9H853 241 aa10.82□□□□□ -0.68
SNRPA1-207ENST00000559309 VAX2Q9UIW0 290 aa10.82□□□□□ -0.68
SNRPA1-207ENST00000559309 RBFOX3A6NFN3 312 aa10.81□□□□□ -0.68
SNRPA1-207ENST00000559309 KLLNB2CW77 178 aa10.81□□□□□ -0.68
SNRPA1-207ENST00000559309 PEX7O00628 323 aa10.81□□□□□ -0.68
SNRPA1-207ENST00000559309 UBE2CO00762 179 aa10.81□□□□□ -0.68
SNRPA1-207ENST00000559309 IFNA1P01562 189 aa10.81□□□□□ -0.68
SNRPA1-207ENST00000559309 ERCC8Q13216 396 aa10.81□□□□□ -0.68
SNRPA1-207ENST00000559309 GOLT1AQ6ZVE7 132 aa10.81□□□□□ -0.68
SNRPA1-207ENST00000559309 CMTM2Q8TAZ6 248 aa10.81□□□□□ -0.68
SNRPA1-207ENST00000559309 TVP23CQ96ET8 276 aa10.81□□□□□ -0.68
SNRPA1-207ENST00000559309 TM2D3Q9BRN9 247 aa10.81□□□□□ -0.68
SNRPA1-207ENST00000559309 SLC35B3Q9H1N7 401 aa10.81□□□□□ -0.68
SNRPA1-207ENST00000559309 TRAV8-1A0A0A6YYK1 113 aa10.8□□□□□ -0.68
SNRPA1-207ENST00000559309 ZNF138P52744 262 aa10.8□□□□□ -0.68
SNRPA1-207ENST00000559309 APOC4P55056 127 aa10.8□□□□□ -0.68
SNRPA1-207ENST00000559309 CST9LP1Q5W188 147 aa10.8□□□□□ -0.68
SNRPA1-207ENST00000559309 SBSPONQ8IVN8 264 aa10.8□□□□□ -0.68
SNRPA1-207ENST00000559309 ZFAND2AQ8N6M9 145 aa10.8□□□□□ -0.68
SNRPA1-207ENST00000559309 OR4B1Q8NGF8 309 aa10.8□□□□□ -0.68
SNRPA1-207ENST00000559309 RARRES2Q99969 163 aa10.8□□□□□ -0.68
SNRPA1-207ENST00000559309 MED9Q9NWA0 146 aa10.8□□□□□ -0.68
SNRPA1-207ENST00000559309 COL7A1Q02388 2944 aa10.8□□□□□ -0.68
SNRPA1-207ENST00000559309 SCO2A0A1W2PP80 73 aa10.79□□□□□ -0.68
SNRPA1-207ENST00000559309 PDE6DO43924 150 aa10.79□□□□□ -0.68
SNRPA1-207ENST00000559309 RPL35AP18077 110 aaKnown RBP10.79□□□□□ -0.68
SNRPA1-207ENST00000559309 Q6ZWC4 215 aa10.79□□□□□ -0.68
SNRPA1-207ENST00000559309 LINC00479Q96M42 142 aa10.79□□□□□ -0.68
SNRPA1-207ENST00000559309 TMEM250H0YL14 139 aa10.78□□□□□ -0.68
SNRPA1-207ENST00000559309 AMBPP02760 352 aa10.78□□□□□ -0.68
SNRPA1-207ENST00000559309 CDKN1BP46527 198 aa10.78□□□□□ -0.68
SNRPA1-207ENST00000559309 NUTF2P61970 127 aaKnown RBP10.78□□□□□ -0.68
SNRPA1-207ENST00000559309 FLI1Q01543 452 aaPredicted RBP10.78□□□□□ -0.68
SNRPA1-207ENST00000559309 KIR3DS1Q14943 382 aa10.78□□□□□ -0.68
SNRPA1-207ENST00000559309 TMEM183BQ1AE95 376 aa10.78□□□□□ -0.68
SNRPA1-207ENST00000559309 TMEM78Q5T7P6 136 aa10.78□□□□□ -0.68
SNRPA1-207ENST00000559309 SMDT1Q9H4I9 107 aa10.78□□□□□ -0.68
SNRPA1-207ENST00000559309 PSG8Q9UQ74 426 aa10.78□□□□□ -0.68
SNRPA1-207ENST00000559309 TP53TG1Q9Y2A0 90 aa10.78□□□□□ -0.68
SNRPA1-207ENST00000559309 TENM3Q9P273 2699 aa10.78□□□□□ -0.68
SNRPA1-207ENST00000559309 F6UZH7 168 aa10.77□□□□□ -0.69
SNRPA1-207ENST00000559309 LTAP01374 205 aa10.77□□□□□ -0.69
SNRPA1-207ENST00000559309 IGKV3-20P01619 116 aa10.77□□□□□ -0.69
SNRPA1-207ENST00000559309 RBMY1A1P0DJD3 496 aaKnown RBP10.77□□□□□ -0.69
SNRPA1-207ENST00000559309 RBMY1CP0DJD4 496 aa10.77□□□□□ -0.69
SNRPA1-207ENST00000559309 RBMY1FQ15415 496 aaKnown RBP10.77□□□□□ -0.69
SNRPA1-207ENST00000559309 DEFB121Q5J5C9 76 aa10.77□□□□□ -0.69
SNRPA1-207ENST00000559309 PRR9Q5T870 116 aa10.77□□□□□ -0.69
SNRPA1-207ENST00000559309 ZNF705AQ6ZN79 300 aaPredicted RBP10.77□□□□□ -0.69
SNRPA1-207ENST00000559309 Q86TA4 180 aa10.77□□□□□ -0.69
SNRPA1-207ENST00000559309 Q8TAT8 98 aa10.77□□□□□ -0.69
SNRPA1-207ENST00000559309 RNF183Q96D59 192 aa10.77□□□□□ -0.69
SNRPA1-207ENST00000559309 FMC1Q96HJ9 113 aa10.77□□□□□ -0.69
SNRPA1-207ENST00000559309 IGF2BP2-AS1Q96M15 143 aa10.77□□□□□ -0.69
SNRPA1-207ENST00000559309 MLST8Q9BVC4 326 aa10.77□□□□□ -0.69
SNRPA1-207ENST00000559309 C1QTNF4Q9BXJ3 329 aa10.77□□□□□ -0.69
SNRPA1-207ENST00000559309 K7EQM0 130 aa10.76□□□□□ -0.69
SNRPA1-207ENST00000559309 M0R2Z0 102 aa10.76□□□□□ -0.69
SNRPA1-207ENST00000559309 ZNF324O75467 553 aaPredicted RBP10.76□□□□□ -0.69
SNRPA1-207ENST00000559309 CA1P00915 261 aaPredicted RBP10.76□□□□□ -0.69
SNRPA1-207ENST00000559309 S100A9P06702 114 aaKnown RBP10.76□□□□□ -0.69
SNRPA1-207ENST00000559309 RAB14P61106 215 aa10.76□□□□□ -0.69
SNRPA1-207ENST00000559309 SRSF3P84103 164 aaKnown RBP10.76□□□□□ -0.69
SNRPA1-207ENST00000559309 SPINK13Q1W4C9 94 aa10.76□□□□□ -0.69
SNRPA1-207ENST00000559309 TOR2AQ5JU69 321 aa10.76□□□□□ -0.69
SNRPA1-207ENST00000559309 GFI1BQ5VTD9 330 aa10.76□□□□□ -0.69
SNRPA1-207ENST00000559309 C1orf158Q8N1D5 194 aa10.76□□□□□ -0.69
SNRPA1-207ENST00000559309 C20orf144Q9BQM9 153 aa10.76□□□□□ -0.69
SNRPA1-207ENST00000559309 RPH3ALQ9UNE2 315 aa10.76□□□□□ -0.69
SNRPA1-207ENST00000559309 TRBV20OR9-2A0A075B6H5 130 aa10.75□□□□□ -0.69
SNRPA1-207ENST00000559309 TRAV34A0A0B4J273 112 aa10.75□□□□□ -0.69
SNRPA1-207ENST00000559309 RAB19A4D1S5 217 aa10.75□□□□□ -0.69
SNRPA1-207ENST00000559309 C9JQL5 133 aa10.75□□□□□ -0.69
SNRPA1-207ENST00000559309 IGLV2-8P01709 118 aa10.75□□□□□ -0.69
SNRPA1-207ENST00000559309 SRP19P09132 144 aaKnown RBP10.75□□□□□ -0.69
SNRPA1-207ENST00000559309 TSPOP30536 169 aa10.75□□□□□ -0.69
SNRPA1-207ENST00000559309 LEPP41159 167 aa10.75□□□□□ -0.69
SNRPA1-207ENST00000559309 TAS2R60P59551 318 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms