RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 TEX48A0A1B0GUV7 120 aa5.69□□□□□ -1.5
USP3-210ENST00000559192 TMEM178BH3BS89 294 aa5.69□□□□□ -1.5
USP3-210ENST00000559192 TAX1BP3O14907 124 aa5.69□□□□□ -1.5
USP3-210ENST00000559192 RS1O15537 224 aa5.69□□□□□ -1.5
USP3-210ENST00000559192 LTAP01374 205 aa5.69□□□□□ -1.5
USP3-210ENST00000559192 ATP5G2Q06055 141 aa5.69□□□□□ -1.5
USP3-210ENST00000559192 ZNF474Q6S9Z5 364 aaPredicted RBP5.69□□□□□ -1.5
USP3-210ENST00000559192 C17orf77Q96MU5 243 aa5.69□□□□□ -1.5
USP3-210ENST00000559192 FAM186AA6NE01 2351 aa5.69□□□□□ -1.5
USP3-210ENST00000559192 TRAV40A0A0B4J280 105 aa5.69□□□□□ -1.5
USP3-210ENST00000559192 CD59P13987 128 aa5.69□□□□□ -1.5
USP3-210ENST00000559192 HAMPP81172 84 aa5.69□□□□□ -1.5
USP3-210ENST00000559192 DEFB125Q8N687 156 aa5.69□□□□□ -1.5
USP3-210ENST00000559192 PCDH15Q96QU1 1955 aa5.69□□□□□ -1.5
USP3-210ENST00000559192 C3orf56Q8N813 242 aa5.69□□□□□ -1.5
USP3-210ENST00000559192 TMEM75Q8N9X5 138 aa5.69□□□□□ -1.5
USP3-210ENST00000559192 V9GYY9 64 aa5.69□□□□□ -1.5
USP3-210ENST00000559192 ESPL1Q14674 2120 aa5.69□□□□□ -1.5
USP3-210ENST00000559192 IGKV1OR2-108A0A075B7D4 117 aa5.69□□□□□ -1.5
USP3-210ENST00000559192 CCL21O00585 134 aa5.69□□□□□ -1.5
USP3-210ENST00000559192 P0C879 139 aa5.69□□□□□ -1.5
USP3-210ENST00000559192 ZNF883P0CG24 379 aa5.69□□□□□ -1.5
USP3-210ENST00000559192 SNRPD3P62318 126 aaKnown RBP5.69□□□□□ -1.5
USP3-210ENST00000559192 MRPL51Q4U2R6 128 aaKnown RBP5.69□□□□□ -1.5
USP3-210ENST00000559192 EEF1AKMT3Q96AZ1 226 aa5.69□□□□□ -1.5
USP3-210ENST00000559192 TMEM243Q9BU79 118 aa5.69□□□□□ -1.5
USP3-210ENST00000559192 CEP350Q5VT06 3117 aa5.69□□□□□ -1.5
USP3-210ENST00000559192 K7EMI3 77 aa5.68□□□□□ -1.5
USP3-210ENST00000559192 FAM57AQ8TBR7 257 aa5.68□□□□□ -1.5
USP3-210ENST00000559192 VGLL1Q99990 258 aa5.68□□□□□ -1.5
USP3-210ENST00000559192 DKK2Q9UBU2 259 aa5.68□□□□□ -1.5
USP3-210ENST00000559192 B9A039 149 aa5.68□□□□□ -1.5
USP3-210ENST00000559192 MALP21145 153 aa5.68□□□□□ -1.5
USP3-210ENST00000559192 SHANK2-AS3Q9BTD1 123 aa5.68□□□□□ -1.5
USP3-210ENST00000559192 EML5Q05BV3 1969 aa5.68□□□□□ -1.5
USP3-210ENST00000559192 TRAV26-2A0A0B4J265 109 aa5.68□□□□□ -1.5
USP3-210ENST00000559192 TRAV41A0A0B4J266 112 aa5.68□□□□□ -1.5
USP3-210ENST00000559192 DAZAP2Q15038 168 aaPredicted RBP5.68□□□□□ -1.5
USP3-210ENST00000559192 LY6EQ16553 131 aa5.68□□□□□ -1.5
USP3-210ENST00000559192 FAM106AQ4KMX7 169 aa5.68□□□□□ -1.5
USP3-210ENST00000559192 GTSF1Q8WW33 167 aa5.68□□□□□ -1.5
USP3-210ENST00000559192 ZNF503Q96F45 646 aa5.68□□□□□ -1.5
USP3-210ENST00000559192 FAM104BQ5XKR9 115 aa5.68□□□□□ -1.5
USP3-210ENST00000559192 PATE2Q6UY27 113 aa5.68□□□□□ -1.5
USP3-210ENST00000559192 OR11H6Q8NGC7 330 aa5.68□□□□□ -1.5
USP3-210ENST00000559192 NTN5Q8WTR8 489 aaPredicted RBP5.68□□□□□ -1.5
USP3-210ENST00000559192 ZNF318Q5VUA4 2279 aa5.68□□□□□ -1.5
USP3-210ENST00000559192 YLPM1P49750 1951 aaKnown RBP5.68□□□□□ -1.5
USP3-210ENST00000559192 KNCNA6PVL3 124 aa5.68□□□□□ -1.5
USP3-210ENST00000559192 BUB1B-PAK6H3BSN5 160 aa5.68□□□□□ -1.5
USP3-210ENST00000559192 NPYP01303 97 aa5.68□□□□□ -1.5
USP3-210ENST00000559192 FGF6P10767 208 aa5.68□□□□□ -1.5
USP3-210ENST00000559192 GDF5OSQ5U4N7 250 aa5.68□□□□□ -1.5
USP3-210ENST00000559192 SUMO4Q6EEV6 95 aa5.68□□□□□ -1.5
USP3-210ENST00000559192 PCP2Q8IVA1 136 aa5.68□□□□□ -1.5
USP3-210ENST00000559192 RITA1Q96K30 269 aa5.68□□□□□ -1.5
USP3-210ENST00000559192 CPAMD8Q8IZJ3 1885 aa5.67□□□□□ -1.5
USP3-210ENST00000559192 TRBV19A0A075B6N1 114 aa5.67□□□□□ -1.5
USP3-210ENST00000559192 LEPROTO15243 131 aa5.67□□□□□ -1.5
USP3-210ENST00000559192 FAM120AOSQ5T036 256 aa5.67□□□□□ -1.5
USP3-210ENST00000559192 PKIGQ9Y2B9 76 aa5.67□□□□□ -1.5
USP3-210ENST00000559192 TRAV12-1A0A0B4J245 112 aa5.67□□□□□ -1.5
USP3-210ENST00000559192 PAX1P15863 534 aa5.67□□□□□ -1.5
USP3-210ENST00000559192 THAP8Q8NA92 274 aa5.67□□□□□ -1.5
USP3-210ENST00000559192 ZNF747Q9BV97 191 aa5.67□□□□□ -1.5
USP3-210ENST00000559192 PTPRSQ13332 1948 aa5.67□□□□□ -1.5
USP3-210ENST00000559192 IGHG3P01860 377 aa5.67□□□□□ -1.5
USP3-210ENST00000559192 SH2D6Q7Z4S9 175 aa5.67□□□□□ -1.5
USP3-210ENST00000559192 IGFBPL1Q8WX77 278 aa5.67□□□□□ -1.5
USP3-210ENST00000559192 FAM167A-AS1Q96KT0 104 aa5.67□□□□□ -1.5
USP3-210ENST00000559192 DUX3Q96PT4 197 aa5.67□□□□□ -1.5
USP3-210ENST00000559192 HEATR1Q9H583 2144 aaKnown RBP5.66□□□□□ -1.5
USP3-210ENST00000559192 PRSS29PA6NIE9 313 aa5.66□□□□□ -1.5
USP3-210ENST00000559192 CD7P09564 240 aa5.66□□□□□ -1.5
USP3-210ENST00000559192 RPL32P62910 135 aaKnown RBP5.66□□□□□ -1.5
USP3-210ENST00000559192 RNASE6Q93091 150 aaKnown RBP5.66□□□□□ -1.5
USP3-210ENST00000559192 CARD19Q96LW7 228 aa5.66□□□□□ -1.5
USP3-210ENST00000559192 PRSS46E5RG02 174 aa5.66□□□□□ -1.5
USP3-210ENST00000559192 IGLV2-8P01709 118 aa5.66□□□□□ -1.5
USP3-210ENST00000559192 NDPQ00604 133 aa5.66□□□□□ -1.5
USP3-210ENST00000559192 ANKRD39Q53RE8 183 aa5.66□□□□□ -1.5
USP3-210ENST00000559192 C1orf229Q6ZS94 237 aaPredicted RBP5.66□□□□□ -1.5
USP3-210ENST00000559192 NCOA6Q14686 2063 aaPredicted RBP5.66□□□□□ -1.5
USP3-210ENST00000559192 E7EUB6 86 aa5.66□□□□□ -1.5
USP3-210ENST00000559192 TRGV3P03979 118 aa5.66□□□□□ -1.5
USP3-210ENST00000559192 CTRLP40313 264 aa5.66□□□□□ -1.5
USP3-210ENST00000559192 LGALS9BQ3B8N2 356 aa5.66□□□□□ -1.5
USP3-210ENST00000559192 LGALS9CQ6DKI2 356 aa5.66□□□□□ -1.5
USP3-210ENST00000559192 IL17RELQ6ZVW7 336 aa5.66□□□□□ -1.5
USP3-210ENST00000559192 NEGR1Q7Z3B1 354 aa5.66□□□□□ -1.5
USP3-210ENST00000559192 NCOR1O75376 2440 aa5.65□□□□□ -1.5
USP3-210ENST00000559192 CDK2AP2O75956 126 aa5.65□□□□□ -1.5
USP3-210ENST00000559192 IGLV1-44P01699 117 aa5.65□□□□□ -1.5
USP3-210ENST00000559192 C8orf86Q6ZUL3 223 aa5.65□□□□□ -1.5
USP3-210ENST00000559192 LINC00527Q9UJ94 153 aa5.65□□□□□ -1.5
USP3-210ENST00000559192 SVILO95425 2214 aa5.65□□□□□ -1.5
USP3-210ENST00000559192 MYMXA0A1B0GTQ4 84 aa5.65□□□□□ -1.5
USP3-210ENST00000559192 C2orf70A6NJV1 201 aa5.65□□□□□ -1.5
USP3-210ENST00000559192 INS-IGF2F8WCM5 200 aa5.65□□□□□ -1.5
USP3-210ENST00000559192 NDUFS7O75251 213 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms