RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 ZNF705FA8MVS1 300 aaPredicted RBP10.46□□□□□ -0.73
TPM1-215ENST00000558868 INAFM1C9JVW0 142 aa10.46□□□□□ -0.73
TPM1-215ENST00000558868 SOCS3O14543 225 aa10.46□□□□□ -0.73
TPM1-215ENST00000558868 HLA-DMBP28068 263 aa10.46□□□□□ -0.73
TPM1-215ENST00000558868 TMEM78Q5T7P6 136 aa10.46□□□□□ -0.73
TPM1-215ENST00000558868 RNF182Q8N6D2 247 aa10.46□□□□□ -0.73
TPM1-215ENST00000558868 ZNF738Q8NE65 137 aa10.46□□□□□ -0.73
TPM1-215ENST00000558868 RPP21Q9H633 154 aaKnown RBP10.46□□□□□ -0.73
TPM1-215ENST00000558868 C2orf70A6NJV1 201 aa10.45□□□□□ -0.74
TPM1-215ENST00000558868 A8MWL6 223 aa10.45□□□□□ -0.74
TPM1-215ENST00000558868 CBLN1P23435 193 aa10.45□□□□□ -0.74
TPM1-215ENST00000558868 COX19Q49B96 90 aa10.45□□□□□ -0.74
TPM1-215ENST00000558868 TSKUQ8WUA8 353 aa10.45□□□□□ -0.74
TPM1-215ENST00000558868 PRR25Q96S07 402 aa10.45□□□□□ -0.74
TPM1-215ENST00000558868 PPP1R14DQ9NXH3 145 aa10.45□□□□□ -0.74
TPM1-215ENST00000558868 RNF114Q9Y508 228 aa10.45□□□□□ -0.74
TPM1-215ENST00000558868 FAM231BA6NCW3 169 aa10.44□□□□□ -0.74
TPM1-215ENST00000558868 WIPF1O43516 503 aa10.44□□□□□ -0.74
TPM1-215ENST00000558868 CRLF1O75462 422 aa10.44□□□□□ -0.74
TPM1-215ENST00000558868 CD28P10747 220 aa10.44□□□□□ -0.74
TPM1-215ENST00000558868 ZNF138P52744 262 aa10.44□□□□□ -0.74
TPM1-215ENST00000558868 SLURP1P55000 103 aa10.44□□□□□ -0.74
TPM1-215ENST00000558868 PAFAH1B2P68402 229 aa10.44□□□□□ -0.74
TPM1-215ENST00000558868 SMUG1Q53HV7 270 aa10.44□□□□□ -0.74
TPM1-215ENST00000558868 C9orf47Q6ZRZ4 202 aa10.44□□□□□ -0.74
TPM1-215ENST00000558868 C18orf65Q6ZTR6 163 aa10.44□□□□□ -0.74
TPM1-215ENST00000558868 OR10J6PQ8NGY7 276 aa10.44□□□□□ -0.74
TPM1-215ENST00000558868 ZC2HC1AQ96GY0 325 aa10.44□□□□□ -0.74
TPM1-215ENST00000558868 VGLL1Q99990 258 aa10.44□□□□□ -0.74
TPM1-215ENST00000558868 GFRA4Q9GZZ7 299 aa10.44□□□□□ -0.74
TPM1-215ENST00000558868 NAT8BQ9UHF3 227 aa10.44□□□□□ -0.74
TPM1-215ENST00000558868 LENEPQ9Y5L5 61 aa10.44□□□□□ -0.74
TPM1-215ENST00000558868 A0A1B0GUS0 222 aa10.43□□□□□ -0.74
TPM1-215ENST00000558868 IZUMO1RA6ND01 250 aa10.43□□□□□ -0.74
TPM1-215ENST00000558868 NPIPB6E9PJ23 425 aa10.43□□□□□ -0.74
TPM1-215ENST00000558868 DEFB136Q30KP8 78 aa10.43□□□□□ -0.74
TPM1-215ENST00000558868 FAM162BQ5T6X4 162 aa10.43□□□□□ -0.74
TPM1-215ENST00000558868 Q71RC1 249 aaPredicted RBP10.43□□□□□ -0.74
TPM1-215ENST00000558868 OR9G4Q8NGQ1 327 aa10.43□□□□□ -0.74
TPM1-215ENST00000558868 LINC00477Q96M19 166 aa10.43□□□□□ -0.74
TPM1-215ENST00000558868 XKRY2A2RUG3 117 aa10.42□□□□□ -0.74
TPM1-215ENST00000558868 PRAC2D3DTV9 90 aa10.42□□□□□ -0.74
TPM1-215ENST00000558868 LINC00322Q6ZN03 302 aaPredicted RBP10.42□□□□□ -0.74
TPM1-215ENST00000558868 MS4A6AQ9H2W1 248 aa10.42□□□□□ -0.74
TPM1-215ENST00000558868 SAV1Q9H4B6 383 aaPredicted RBP10.42□□□□□ -0.74
TPM1-215ENST00000558868 TRAV2A0A0B4J234 112 aa10.41□□□□□ -0.74
TPM1-215ENST00000558868 CCL24O00175 119 aa10.41□□□□□ -0.74
TPM1-215ENST00000558868 TRGC2P03986 189 aa10.41□□□□□ -0.74
TPM1-215ENST00000558868 S100A6P06703 90 aa10.41□□□□□ -0.74
TPM1-215ENST00000558868 PROK1P58294 105 aa10.41□□□□□ -0.74
TPM1-215ENST00000558868 RPS20P60866 119 aaKnown RBP10.41□□□□□ -0.74
TPM1-215ENST00000558868 SNRPD3P62318 126 aaKnown RBP10.41□□□□□ -0.74
TPM1-215ENST00000558868 SRSF2Q01130 221 aaKnown RBP10.41□□□□□ -0.74
TPM1-215ENST00000558868 ERCC8Q13216 396 aa10.41□□□□□ -0.74
TPM1-215ENST00000558868 WDR73Q6P4I2 378 aa10.41□□□□□ -0.74
TPM1-215ENST00000558868 RASL11AQ6T310 242 aa10.41□□□□□ -0.74
TPM1-215ENST00000558868 OR2D3Q8NGH3 330 aa10.41□□□□□ -0.74
TPM1-215ENST00000558868 DCANP1Q8TF63 244 aa10.41□□□□□ -0.74
TPM1-215ENST00000558868 C20orf173Q96LM9 149 aa10.41□□□□□ -0.74
TPM1-215ENST00000558868 C8orf49Q96NF6 230 aa10.41□□□□□ -0.74
TPM1-215ENST00000558868 ASCL2Q99929 193 aa10.41□□□□□ -0.74
TPM1-215ENST00000558868 CITED2Q99967 270 aaPredicted RBP10.41□□□□□ -0.74
TPM1-215ENST00000558868 AGPAT4-IT1Q9H0P7 198 aa10.41□□□□□ -0.74
TPM1-215ENST00000558868 STAB1Q9NY15 2570 aa10.4□□□□□ -0.74
TPM1-215ENST00000558868 ANK3Q12955 4377 aaKnown RBP10.4□□□□□ -0.74
TPM1-215ENST00000558868 IGKV3-7A0A075B6H7 116 aa10.4□□□□□ -0.74
TPM1-215ENST00000558868 TRBV7-9A0A0J9YWB2 115 aa10.4□□□□□ -0.74
TPM1-215ENST00000558868 FABP5P3A8MUU1 101 aa10.4□□□□□ -0.74
TPM1-215ENST00000558868 MT-ND6P03923 174 aa10.4□□□□□ -0.74
TPM1-215ENST00000558868 EDN2P20800 178 aa10.4□□□□□ -0.74
TPM1-215ENST00000558868 TCL1AP56279 114 aa10.4□□□□□ -0.74
TPM1-215ENST00000558868 FHL3Q13643 280 aa10.4□□□□□ -0.74
TPM1-215ENST00000558868 Q6AWC8 147 aa10.4□□□□□ -0.74
TPM1-215ENST00000558868 ATP5L2Q7Z4Y8 100 aa10.4□□□□□ -0.74
TPM1-215ENST00000558868 ZFP82Q8N141 532 aa10.4□□□□□ -0.74
TPM1-215ENST00000558868 SPATA3Q8NHX4 192 aa10.4□□□□□ -0.74
TPM1-215ENST00000558868 Q8TAT8 98 aa10.4□□□□□ -0.74
TPM1-215ENST00000558868 DLX4Q92988 240 aaPredicted RBP10.4□□□□□ -0.74
TPM1-215ENST00000558868 RAX2Q96IS3 184 aa10.4□□□□□ -0.74
TPM1-215ENST00000558868 TRAPPC1Q9Y5R8 145 aa10.4□□□□□ -0.74
TPM1-215ENST00000558868 A0A1W2PRX2 142 aa10.39□□□□□ -0.75
TPM1-215ENST00000558868 TMEM189A5PLL7 270 aa10.39□□□□□ -0.75
TPM1-215ENST00000558868 K7EQG2 157 aa10.39□□□□□ -0.75
TPM1-215ENST00000558868 SH2D1AO60880 128 aa10.39□□□□□ -0.75
TPM1-215ENST00000558868 CA1P00915 261 aaPredicted RBP10.39□□□□□ -0.75
TPM1-215ENST00000558868 CRIP1P50238 77 aa10.39□□□□□ -0.75
TPM1-215ENST00000558868 ACTL10Q5JWF8 245 aa10.39□□□□□ -0.75
TPM1-215ENST00000558868 RBPMS2Q6ZRY4 209 aaKnown RBP10.39□□□□□ -0.75
TPM1-215ENST00000558868 WFDC3Q8IUB2 231 aa10.39□□□□□ -0.75
TPM1-215ENST00000558868 NUP35Q8NFH5 326 aa10.39□□□□□ -0.75
TPM1-215ENST00000558868 OR8A1Q8NGG7 326 aa10.39□□□□□ -0.75
TPM1-215ENST00000558868 DYNLRB2Q8TF09 96 aa10.39□□□□□ -0.75
TPM1-215ENST00000558868 NEU1Q99519 415 aa10.39□□□□□ -0.75
TPM1-215ENST00000558868 GNB1LQ9BYB4 327 aa10.39□□□□□ -0.75
TPM1-215ENST00000558868 HIGD1CA8MV81 97 aa10.38□□□□□ -0.75
TPM1-215ENST00000558868 CSN3P07498 182 aa10.38□□□□□ -0.75
TPM1-215ENST00000558868 HIST1H1AQ02539 215 aaPredicted RBP10.38□□□□□ -0.75
TPM1-215ENST00000558868 C11orf44Q8N8P7 122 aa10.38□□□□□ -0.75
TPM1-215ENST00000558868 DUX3Q96PT4 197 aa10.38□□□□□ -0.75
TPM1-215ENST00000558868 GPR61Q9BZJ8 451 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms