RNA–Protein interactions for RNA: ENST00000558176.1

HMG20A-203, Transcript of high mobility group 20A, humanhuman

TSL 3

Gene HMG20A, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-203ENST00000558176 HOXB5P09067 269 aa2.15□□□□□ -2.07
HMG20A-203ENST00000558176 CXCL2P19875 107 aa2.15□□□□□ -2.07
HMG20A-203ENST00000558176 LEPP41159 167 aa2.15□□□□□ -2.07
HMG20A-203ENST00000558176 RPP30P78346 268 aaKnown RBP2.15□□□□□ -2.07
HMG20A-203ENST00000558176 SRPXP78539 464 aa2.15□□□□□ -2.07
HMG20A-203ENST00000558176 SLC38A11Q08AI6 406 aa2.15□□□□□ -2.07
HMG20A-203ENST00000558176 DAZ2Q13117 558 aaKnown RBP2.15□□□□□ -2.07
HMG20A-203ENST00000558176 BTN1A1Q13410 526 aa2.15□□□□□ -2.07
HMG20A-203ENST00000558176 IL18Q14116 193 aa2.15□□□□□ -2.07
HMG20A-203ENST00000558176 TWIST1Q15672 202 aa2.15□□□□□ -2.07
HMG20A-203ENST00000558176 PXDC1Q5TGL8 231 aa2.15□□□□□ -2.07
HMG20A-203ENST00000558176 LCN15Q6UWW0 184 aa2.15□□□□□ -2.07
HMG20A-203ENST00000558176 NFE4Q86UQ8 179 aa2.15□□□□□ -2.07
HMG20A-203ENST00000558176 WFDC10BQ8IUB3 73 aa2.15□□□□□ -2.07
HMG20A-203ENST00000558176 NRACQ8N912 160 aa2.15□□□□□ -2.07
HMG20A-203ENST00000558176 ZBTB8BQ8NAP8 495 aaPredicted RBP2.15□□□□□ -2.07
HMG20A-203ENST00000558176 C11orf72Q8NBR9 251 aa2.15□□□□□ -2.07
HMG20A-203ENST00000558176 DEDD2Q8WXF8 326 aa2.15□□□□□ -2.07
HMG20A-203ENST00000558176 SCGB3A2Q96PL1 93 aa2.15□□□□□ -2.07
HMG20A-203ENST00000558176 CIB3Q96Q77 187 aaPredicted RBP2.15□□□□□ -2.07
HMG20A-203ENST00000558176 C20orf144Q9BQM9 153 aa2.15□□□□□ -2.07
HMG20A-203ENST00000558176 PYGO2Q9BRQ0 406 aa2.15□□□□□ -2.07
HMG20A-203ENST00000558176 LINC00467Q9BRT7 94 aa2.15□□□□□ -2.07
HMG20A-203ENST00000558176 SLC50A1Q9BRV3 221 aa2.15□□□□□ -2.07
HMG20A-203ENST00000558176 ARL6Q9H0F7 186 aa2.15□□□□□ -2.07
HMG20A-203ENST00000558176 ARV1Q9H2C2 271 aa2.15□□□□□ -2.07
HMG20A-203ENST00000558176 ZNF331Q9NQX6 463 aaPredicted RBP2.15□□□□□ -2.07
HMG20A-203ENST00000558176 MRPL16Q9NX20 251 aaKnown RBP2.15□□□□□ -2.07
HMG20A-203ENST00000558176 MSRB1Q9NZV6 116 aa2.15□□□□□ -2.07
HMG20A-203ENST00000558176 SCP2D1Q9UJQ7 156 aa2.15□□□□□ -2.07
HMG20A-203ENST00000558176 STRAPQ9Y3F4 350 aaKnown RBP2.15□□□□□ -2.07
HMG20A-203ENST00000558176 KLF12Q9Y4X4 402 aa2.15□□□□□ -2.07
HMG20A-203ENST00000558176 LY96Q9Y6Y9 160 aa2.15□□□□□ -2.07
HMG20A-203ENST00000558176 MUC4Q99102 2169 aa2.15□□□□□ -2.07
HMG20A-203ENST00000558176 TRAV9-2A0A087WT02 112 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 TRGV4A0A0C4DH28 118 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 DUXBA0A1W2PPF3 345 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 C7orf71A4D174 169 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 CTDSP2O14595 271 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 GOSR2O14653 212 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 MRPS12O15235 138 aaKnown RBP2.14□□□□□ -2.07
HMG20A-203ENST00000558176 PSCAO43653 123 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 SSSCA1O60232 199 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 COX7A2P2O60397 106 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 PRAF2O60831 178 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 NOL3O60936 208 aaKnown RBP2.14□□□□□ -2.07
HMG20A-203ENST00000558176 ZNF324O75467 553 aaPredicted RBP2.14□□□□□ -2.07
HMG20A-203ENST00000558176 SFT2D2O95562 160 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 SFTA3P0C7M3 94 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 METTL15P1P0C7V9 234 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 CT45A10P0DMU9 189 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 SLC25A6P12236 298 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 EVI2AP22794 236 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 SRIP30626 198 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 RNASE4P34096 147 aaKnown RBP2.14□□□□□ -2.07
HMG20A-203ENST00000558176 CRYBA4P53673 196 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 TCL1AP56279 114 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 PLP1P60201 277 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 SELENOTP62341 195 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 POLR2GP62487 172 aaKnown RBP eCLIP2.14□□□□□ -2.07
HMG20A-203ENST00000558176 CD300CQ08708 224 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 ZNF415Q09FC8 603 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 ERCC8Q13216 396 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 PPP1R1AQ13522 171 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 CTF1Q16619 201 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 LYPD5Q6UWN5 251 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 PATE2Q6UY27 113 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 NEGR1Q7Z3B1 354 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 LINC00305Q7Z4B0 112 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 S100A7AQ86SG5 101 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 ZNF546Q86UE3 836 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 BPIFA4PQ86YQ2 179 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 ZNF680Q8NEM1 530 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 ZNF431Q8TF32 576 aaPredicted RBP2.14□□□□□ -2.07
HMG20A-203ENST00000558176 DIRAS2Q96HU8 199 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 ST6GAL2Q96JF0 529 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 TMEM70Q9BUB7 260 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 Q9HAA7 133 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 PSENENQ9NZ42 101 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 CCDC59Q9P031 241 aaKnown RBP2.14□□□□□ -2.07
HMG20A-203ENST00000558176 TP53TG3Q9ULZ0 132 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 DYNC1H1Q14204 4646 aaKnown RBP2.14□□□□□ -2.07
HMG20A-203ENST00000558176 DNAH17Q9UFH2 4485 aa2.14□□□□□ -2.07
HMG20A-203ENST00000558176 IGKV2-40A0A087WW87 121 aaPredicted RBP2.13□□□□□ -2.07
HMG20A-203ENST00000558176 TRAV5A0A0B4J249 113 aa2.13□□□□□ -2.07
HMG20A-203ENST00000558176 LOC100131303A0A0U1RQF7 123 aa2.13□□□□□ -2.07
HMG20A-203ENST00000558176 LRCOL1A6NCL2 159 aa2.13□□□□□ -2.07
HMG20A-203ENST00000558176 H3BQ15 152 aa2.13□□□□□ -2.07
HMG20A-203ENST00000558176 K7EQD1 137 aa2.13□□□□□ -2.07
HMG20A-203ENST00000558176 M0R3E3 92 aa2.13□□□□□ -2.07
HMG20A-203ENST00000558176 LECT2O14960 151 aa2.13□□□□□ -2.07
HMG20A-203ENST00000558176 AGPAT2O15120 278 aa2.13□□□□□ -2.07
HMG20A-203ENST00000558176 CTDSPLO15194 276 aa2.13□□□□□ -2.07
HMG20A-203ENST00000558176 SPINK4O60575 86 aa2.13□□□□□ -2.07
HMG20A-203ENST00000558176 IGKV2D-40P01614 121 aaPredicted RBP2.13□□□□□ -2.07
HMG20A-203ENST00000558176 CRYGDP07320 174 aa2.13□□□□□ -2.07
HMG20A-203ENST00000558176 OR4E1P0C645 316 aa2.13□□□□□ -2.07
HMG20A-203ENST00000558176 IGLC2P0DOY2 106 aa2.13□□□□□ -2.07
HMG20A-203ENST00000558176 FAUP35544 74 aaKnown RBP2.13□□□□□ -2.07
HMG20A-203ENST00000558176 TMBIM6P55061 237 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms