RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 KCNIP2Q9NS61 270 aa10.19□□□□□ -0.78
SHMT2-235ENST00000557740 TRGV2A0A075B6R0 118 aa10.18□□□□□ -0.78
SHMT2-235ENST00000557740 HOXA5P20719 270 aa10.18□□□□□ -0.78
SHMT2-235ENST00000557740 Q6ZTI0 123 aa10.18□□□□□ -0.78
SHMT2-235ENST00000557740 EXOC3-AS1Q8N2X6 119 aa10.18□□□□□ -0.78
SHMT2-235ENST00000557740 OR5C1Q8NGR4 320 aa10.18□□□□□ -0.78
SHMT2-235ENST00000557740 LINC00477Q96M19 166 aa10.18□□□□□ -0.78
SHMT2-235ENST00000557740 SLC25A2Q9BXI2 301 aa10.18□□□□□ -0.78
SHMT2-235ENST00000557740 Q9H8V8 135 aa10.18□□□□□ -0.78
SHMT2-235ENST00000557740 C16orf90A8MZG2 172 aa10.17□□□□□ -0.78
SHMT2-235ENST00000557740 KLLNB2CW77 178 aa10.17□□□□□ -0.78
SHMT2-235ENST00000557740 E5RGE8 158 aa10.17□□□□□ -0.78
SHMT2-235ENST00000557740 H3BNG1 76 aa10.17□□□□□ -0.78
SHMT2-235ENST00000557740 RNASE4P34096 147 aaKnown RBP10.17□□□□□ -0.78
SHMT2-235ENST00000557740 NHLH2Q02577 135 aa10.17□□□□□ -0.78
SHMT2-235ENST00000557740 BTN1A1Q13410 526 aa10.17□□□□□ -0.78
SHMT2-235ENST00000557740 ICAM4Q14773 271 aa10.17□□□□□ -0.78
SHMT2-235ENST00000557740 TMEM78Q5T7P6 136 aa10.17□□□□□ -0.78
SHMT2-235ENST00000557740 LINC00299Q6ZSB3 139 aa10.17□□□□□ -0.78
SHMT2-235ENST00000557740 GSN-AS1Q9NRJ2 163 aa10.17□□□□□ -0.78
SHMT2-235ENST00000557740 DNAH11Q96DT5 4516 aa10.16□□□□□ -0.78
SHMT2-235ENST00000557740 IGKV2-40A0A087WW87 121 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-235ENST00000557740 TRGV1A0A0A0MS02 117 aa10.16□□□□□ -0.78
SHMT2-235ENST00000557740 SIX6O95475 246 aa10.16□□□□□ -0.78
SHMT2-235ENST00000557740 IGKV2D-40P01614 121 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-235ENST00000557740 GPX1P07203 203 aa10.16□□□□□ -0.78
SHMT2-235ENST00000557740 CD300CQ08708 224 aa10.16□□□□□ -0.78
SHMT2-235ENST00000557740 LRRC37A5PQ49AS3 106 aa10.16□□□□□ -0.78
SHMT2-235ENST00000557740 FAM122CQ6P4D5 195 aa10.16□□□□□ -0.78
SHMT2-235ENST00000557740 MIR17HGQ75NE6 70 aa10.16□□□□□ -0.78
SHMT2-235ENST00000557740 EIF4E3Q8N5X7 224 aaKnown RBP10.16□□□□□ -0.78
SHMT2-235ENST00000557740 FAM19A4Q96LR4 140 aa10.16□□□□□ -0.78
SHMT2-235ENST00000557740 LINC00467Q9BRT7 94 aa10.16□□□□□ -0.78
SHMT2-235ENST00000557740 AGPAT4-IT1Q9H0P7 198 aa10.16□□□□□ -0.78
SHMT2-235ENST00000557740 RGS13O14921 159 aa10.15□□□□□ -0.78
SHMT2-235ENST00000557740 NBEAP1P0C6P0 100 aa10.15□□□□□ -0.78
SHMT2-235ENST00000557740 CRISP2P16562 243 aa10.15□□□□□ -0.78
SHMT2-235ENST00000557740 CYCSP99999 105 aaKnown RBP10.15□□□□□ -0.78
SHMT2-235ENST00000557740 ANXA2RQ3ZCQ2 193 aa10.15□□□□□ -0.78
SHMT2-235ENST00000557740 C9orf47Q6ZRZ4 202 aa10.15□□□□□ -0.78
SHMT2-235ENST00000557740 C11orf72Q8NBR9 251 aa10.15□□□□□ -0.78
SHMT2-235ENST00000557740 UPK3BQ9BT76 320 aa10.15□□□□□ -0.78
SHMT2-235ENST00000557740 MRPL32Q9BYC8 188 aaKnown RBP10.15□□□□□ -0.78
SHMT2-235ENST00000557740 NMES1Q9C002 83 aa10.15□□□□□ -0.78
SHMT2-235ENST00000557740 OR51M1Q9H341 326 aa10.15□□□□□ -0.78
SHMT2-235ENST00000557740 Q9H3A6 140 aa10.15□□□□□ -0.78
SHMT2-235ENST00000557740 OR5AC2Q9NZP5 309 aa10.15□□□□□ -0.78
SHMT2-235ENST00000557740 FUT9Q9Y231 359 aa10.15□□□□□ -0.78
SHMT2-235ENST00000557740 MRPS16Q9Y3D3 137 aaKnown RBP10.15□□□□□ -0.78
SHMT2-235ENST00000557740 C17orf112F2Z3M2 114 aa10.14□□□□□ -0.79
SHMT2-235ENST00000557740 PRAF2O60831 178 aa10.14□□□□□ -0.79
SHMT2-235ENST00000557740 ZNF324O75467 553 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-235ENST00000557740 NMBP08949 121 aa10.14□□□□□ -0.79
SHMT2-235ENST00000557740 OR10J4P0C629 311 aa10.14□□□□□ -0.79
SHMT2-235ENST00000557740 ESRGQ1W209 222 aa10.14□□□□□ -0.79
SHMT2-235ENST00000557740 FAM167A-AS1Q96KT0 104 aa10.14□□□□□ -0.79
SHMT2-235ENST00000557740 C18orf15Q96N68 181 aa10.14□□□□□ -0.79
SHMT2-235ENST00000557740 VGLL1Q99990 258 aa10.14□□□□□ -0.79
SHMT2-235ENST00000557740 ARPC5LQ9BPX5 153 aa10.14□□□□□ -0.79
SHMT2-235ENST00000557740 PAXXQ9BUH6 204 aa10.14□□□□□ -0.79
SHMT2-235ENST00000557740 WDR61Q9GZS3 305 aaKnown RBP10.14□□□□□ -0.79
SHMT2-235ENST00000557740 OR7C2O60412 319 aa10.13□□□□□ -0.79
SHMT2-235ENST00000557740 UPK1BO75841 260 aa10.13□□□□□ -0.79
SHMT2-235ENST00000557740 TCL1AP56279 114 aa10.13□□□□□ -0.79
SHMT2-235ENST00000557740 ZFAND2AQ8N6M9 145 aa10.13□□□□□ -0.79
SHMT2-235ENST00000557740 PHYHIPLQ96FC7 376 aa10.13□□□□□ -0.79
SHMT2-235ENST00000557740 KRTAP1-5Q9BYS1 174 aa10.13□□□□□ -0.79
SHMT2-235ENST00000557740 KLF12Q9Y4X4 402 aa10.13□□□□□ -0.79
SHMT2-235ENST00000557740 MUC4Q99102 2169 aa10.13□□□□□ -0.79
SHMT2-235ENST00000557740 PKD1P98161 4303 aa10.12□□□□□ -0.79
SHMT2-235ENST00000557740 IGHV1OR15-1A0A075B7D0 117 aa10.12□□□□□ -0.79
SHMT2-235ENST00000557740 A0A1W2PPQ1 181 aa10.12□□□□□ -0.79
SHMT2-235ENST00000557740 CSN1S1P47710 185 aa10.12□□□□□ -0.79
SHMT2-235ENST00000557740 ZNF138P52744 262 aa10.12□□□□□ -0.79
SHMT2-235ENST00000557740 IBA57Q5T440 356 aaKnown RBP10.12□□□□□ -0.79
SHMT2-235ENST00000557740 PRR9Q5T870 116 aa10.12□□□□□ -0.79
SHMT2-235ENST00000557740 FXYD5Q96DB9 178 aa10.12□□□□□ -0.79
SHMT2-235ENST00000557740 VSIG2Q96IQ7 327 aa10.12□□□□□ -0.79
SHMT2-235ENST00000557740 ATP5SQ99766 215 aa10.12□□□□□ -0.79
SHMT2-235ENST00000557740 ZNF492Q9P255 531 aa10.12□□□□□ -0.79
SHMT2-235ENST00000557740 DYNC1H1Q14204 4646 aaKnown RBP10.12□□□□□ -0.79
SHMT2-235ENST00000557740 A0A096LPF7 62 aa10.11□□□□□ -0.79
SHMT2-235ENST00000557740 INMT-MINDY4F8WBC2 141 aa10.11□□□□□ -0.79
SHMT2-235ENST00000557740 H0YIZ8 118 aa10.11□□□□□ -0.79
SHMT2-235ENST00000557740 SPINK4O60575 86 aa10.11□□□□□ -0.79
SHMT2-235ENST00000557740 PET100P0DJ07 73 aa10.11□□□□□ -0.79
SHMT2-235ENST00000557740 UBE2L3P68036 154 aaKnown RBP10.11□□□□□ -0.79
SHMT2-235ENST00000557740 Q8TAT8 98 aa10.11□□□□□ -0.79
SHMT2-235ENST00000557740 ST6GAL2Q96JF0 529 aa10.11□□□□□ -0.79
SHMT2-235ENST00000557740 MRPL16Q9NX20 251 aaKnown RBP10.11□□□□□ -0.79
SHMT2-235ENST00000557740 TP53TG3Q9ULZ0 132 aa10.11□□□□□ -0.79
SHMT2-235ENST00000557740 TRBV7-9A0A0J9YWB2 115 aa10.1□□□□□ -0.79
SHMT2-235ENST00000557740 PAX4O43316 350 aa10.1□□□□□ -0.79
SHMT2-235ENST00000557740 CDK2AP2O75956 126 aa10.1□□□□□ -0.79
SHMT2-235ENST00000557740 IGHV3-53P01767 116 aa10.1□□□□□ -0.79
SHMT2-235ENST00000557740 ZNF415Q09FC8 603 aa10.1□□□□□ -0.79
SHMT2-235ENST00000557740 KHDC3LQ587J8 217 aa10.1□□□□□ -0.79
SHMT2-235ENST00000557740 FFAR4Q5NUL3 377 aa10.1□□□□□ -0.79
SHMT2-235ENST00000557740 PPP1R1CQ8WVI7 109 aa10.1□□□□□ -0.79
SHMT2-235ENST00000557740 ICOSQ9Y6W8 199 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms