RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 PRAC2D3DTV9 90 aa9.95□□□□□ -0.82
SHMT2-234ENST00000557703 HMGB3O15347 200 aaKnown RBP9.95□□□□□ -0.82
SHMT2-234ENST00000557703 HBE1P02100 147 aa9.95□□□□□ -0.82
SHMT2-234ENST00000557703 CRISP2P16562 243 aa9.95□□□□□ -0.82
SHMT2-234ENST00000557703 DEFB1P60022 68 aa9.95□□□□□ -0.82
SHMT2-234ENST00000557703 TEX48A0A1B0GUV7 120 aa9.94□□□□□ -0.82
SHMT2-234ENST00000557703 F6UZH7 168 aa9.94□□□□□ -0.82
SHMT2-234ENST00000557703 ZNF138P52744 262 aa9.94□□□□□ -0.82
SHMT2-234ENST00000557703 CD300CQ08708 224 aa9.94□□□□□ -0.82
SHMT2-234ENST00000557703 PMS2P11Q13670 270 aa9.94□□□□□ -0.82
SHMT2-234ENST00000557703 FAM213BQ8TBF2 198 aa9.94□□□□□ -0.82
SHMT2-234ENST00000557703 SFT2D1Q8WV19 159 aa9.94□□□□□ -0.82
SHMT2-234ENST00000557703 HIST1H2BAQ96A08 127 aa9.94□□□□□ -0.82
SHMT2-234ENST00000557703 FAM19A4Q96LR4 140 aa9.94□□□□□ -0.82
SHMT2-234ENST00000557703 TXNDC17Q9BRA2 123 aa9.94□□□□□ -0.82
SHMT2-234ENST00000557703 AGPAT4-IT1Q9H0P7 198 aa9.94□□□□□ -0.82
SHMT2-234ENST00000557703 RETNQ9HD89 108 aa9.94□□□□□ -0.82
SHMT2-234ENST00000557703 ZNF492Q9P255 531 aa9.94□□□□□ -0.82
SHMT2-234ENST00000557703 HUWE1Q7Z6Z7 4374 aaKnown RBP9.93□□□□□ -0.82
SHMT2-234ENST00000557703 H7BYZ3 331 aa9.93□□□□□ -0.82
SHMT2-234ENST00000557703 CRXO43186 299 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-234ENST00000557703 CT45A10P0DMU9 189 aa9.93□□□□□ -0.82
SHMT2-234ENST00000557703 SUMO1P63165 101 aaKnown RBP9.93□□□□□ -0.82
SHMT2-234ENST00000557703 SPINK13Q1W4C9 94 aa9.93□□□□□ -0.82
SHMT2-234ENST00000557703 SSX7Q7RTT5 188 aa9.93□□□□□ -0.82
SHMT2-234ENST00000557703 TMEM208Q9BTX3 173 aa9.93□□□□□ -0.82
SHMT2-234ENST00000557703 EPDR1Q9UM22 224 aa9.93□□□□□ -0.82
SHMT2-234ENST00000557703 KLLNB2CW77 178 aa9.92□□□□□ -0.82
SHMT2-234ENST00000557703 C3orf84H3BNL1 204 aa9.92□□□□□ -0.82
SHMT2-234ENST00000557703 M0R2Z0 102 aa9.92□□□□□ -0.82
SHMT2-234ENST00000557703 TAGLN2P37802 199 aaKnown RBP9.92□□□□□ -0.82
SHMT2-234ENST00000557703 TAS2R60P59551 318 aa9.92□□□□□ -0.82
SHMT2-234ENST00000557703 ZNF493Q6ZR52 646 aa9.92□□□□□ -0.82
SHMT2-234ENST00000557703 IQCF2Q8IXL9 164 aa9.92□□□□□ -0.82
SHMT2-234ENST00000557703 Q8NAQ8 132 aa9.92□□□□□ -0.82
SHMT2-234ENST00000557703 ATG101Q9BSB4 218 aa9.92□□□□□ -0.82
SHMT2-234ENST00000557703 PLA2G2EQ9NZK7 142 aa9.92□□□□□ -0.82
SHMT2-234ENST00000557703 X6R8D5 127 aa9.92□□□□□ -0.82
SHMT2-234ENST00000557703 FAM74A7A6NL05 159 aa9.91□□□□□ -0.82
SHMT2-234ENST00000557703 TCRAP04437 139 aa9.91□□□□□ -0.82
SHMT2-234ENST00000557703 BLOC1S1P78537 153 aa9.91□□□□□ -0.82
SHMT2-234ENST00000557703 RRN3P1Q2M238 152 aa9.91□□□□□ -0.82
SHMT2-234ENST00000557703 C1orf158Q8N1D5 194 aa9.91□□□□□ -0.82
SHMT2-234ENST00000557703 CYB561D1Q8N8Q1 229 aa9.91□□□□□ -0.82
SHMT2-234ENST00000557703 VGLL1Q99990 258 aa9.91□□□□□ -0.82
SHMT2-234ENST00000557703 PYGO2Q9BRQ0 406 aa9.91□□□□□ -0.82
SHMT2-234ENST00000557703 LINC00467Q9BRT7 94 aa9.91□□□□□ -0.82
SHMT2-234ENST00000557703 NIPSNAP3BQ9BS92 247 aa9.91□□□□□ -0.82
SHMT2-234ENST00000557703 NDFIP1Q9BT67 221 aa9.91□□□□□ -0.82
SHMT2-234ENST00000557703 MANBALQ9NQG1 85 aa9.91□□□□□ -0.82
SHMT2-234ENST00000557703 IGKV2-40A0A087WW87 121 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-234ENST00000557703 GGTLC3B5MD39 225 aa9.9□□□□□ -0.82
SHMT2-234ENST00000557703 IFNA7P01567 189 aa9.9□□□□□ -0.82
SHMT2-234ENST00000557703 IGKV2D-40P01614 121 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-234ENST00000557703 GPX1P07203 203 aa9.9□□□□□ -0.82
SHMT2-234ENST00000557703 FGF8P55075 233 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-234ENST00000557703 FXYD7P58549 80 aa9.9□□□□□ -0.82
SHMT2-234ENST00000557703 SAPCD1Q5SSQ6 148 aa9.9□□□□□ -0.82
SHMT2-234ENST00000557703 TMEM75Q8N9X5 138 aa9.9□□□□□ -0.82
SHMT2-234ENST00000557703 MUC7Q8TAX7 377 aa9.9□□□□□ -0.82
SHMT2-234ENST00000557703 A0A0J9YWU9 116 aa9.89□□□□□ -0.83
SHMT2-234ENST00000557703 C7orf71A4D174 169 aa9.89□□□□□ -0.83
SHMT2-234ENST00000557703 EIF3GO75821 320 aaKnown RBP eCLIP9.89□□□□□ -0.83
SHMT2-234ENST00000557703 S100A9P06702 114 aaKnown RBP9.89□□□□□ -0.83
SHMT2-234ENST00000557703 ERCC8Q13216 396 aa9.89□□□□□ -0.83
SHMT2-234ENST00000557703 GFI1BQ5VTD9 330 aa9.89□□□□□ -0.83
SHMT2-234ENST00000557703 GOLT1AQ6ZVE7 132 aa9.89□□□□□ -0.83
SHMT2-234ENST00000557703 CCDC28AQ8IWP9 274 aa9.89□□□□□ -0.83
SHMT2-234ENST00000557703 LINC01587Q99440 93 aa9.89□□□□□ -0.83
SHMT2-234ENST00000557703 TMPRSS5Q9H3S3 457 aa9.89□□□□□ -0.83
SHMT2-234ENST00000557703 TRAV12-2A0A075B6T6 113 aa9.88□□□□□ -0.83
SHMT2-234ENST00000557703 IGHV4-28A0A0C4DH34 117 aa9.88□□□□□ -0.83
SHMT2-234ENST00000557703 IFNA1P01562 189 aa9.88□□□□□ -0.83
SHMT2-234ENST00000557703 ZFAND2AQ8N6M9 145 aa9.88□□□□□ -0.83
SHMT2-234ENST00000557703 C16orf74Q96GX8 76 aa9.88□□□□□ -0.83
SHMT2-234ENST00000557703 YTHDF2Q9Y5A9 579 aaKnown RBP9.88□□□□□ -0.83
SHMT2-234ENST00000557703 IGHV3OR16-12A0A075B7B8 117 aa9.87□□□□□ -0.83
SHMT2-234ENST00000557703 TRBV6-1A0A0K0K1D8 114 aa9.87□□□□□ -0.83
SHMT2-234ENST00000557703 ZNF324O75467 553 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-234ENST00000557703 FLI1Q01543 452 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-234ENST00000557703 CST9LP1Q5W188 147 aa9.87□□□□□ -0.83
SHMT2-234ENST00000557703 Q6AWC8 147 aa9.87□□□□□ -0.83
SHMT2-234ENST00000557703 C11orf45Q8TAV5 145 aa9.87□□□□□ -0.83
SHMT2-234ENST00000557703 ZFP30Q9Y2G7 519 aa9.87□□□□□ -0.83
SHMT2-234ENST00000557703 KLF12Q9Y4X4 402 aa9.87□□□□□ -0.83
SHMT2-234ENST00000557703 LYRM9A8MSI8 78 aa9.86□□□□□ -0.83
SHMT2-234ENST00000557703 C11orf94C9JXX5 98 aa9.86□□□□□ -0.83
SHMT2-234ENST00000557703 PEX7O00628 323 aa9.86□□□□□ -0.83
SHMT2-234ENST00000557703 PAGE4O60829 102 aa9.86□□□□□ -0.83
SHMT2-234ENST00000557703 SPART-AS1P0CW21 52 aa9.86□□□□□ -0.83
SHMT2-234ENST00000557703 RBMY1A1P0DJD3 496 aaKnown RBP9.86□□□□□ -0.83
SHMT2-234ENST00000557703 RBMY1CP0DJD4 496 aa9.86□□□□□ -0.83
SHMT2-234ENST00000557703 NKX2-5P52952 324 aaPredicted RBP9.86□□□□□ -0.83
SHMT2-234ENST00000557703 UBE2G2P60604 165 aa9.86□□□□□ -0.83
SHMT2-234ENST00000557703 RBMY1FQ15415 496 aaKnown RBP9.86□□□□□ -0.83
SHMT2-234ENST00000557703 ANXA2RQ3ZCQ2 193 aa9.86□□□□□ -0.83
SHMT2-234ENST00000557703 ZNF680Q8NEM1 530 aa9.86□□□□□ -0.83
SHMT2-234ENST00000557703 LYPD6BQ8NI32 183 aa9.86□□□□□ -0.83
SHMT2-234ENST00000557703 TMEM263Q8WUH6 116 aaKnown RBP9.86□□□□□ -0.83
SHMT2-234ENST00000557703 FMC1Q96HJ9 113 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms