RNA–Protein interactions for RNA: ENST00000557657.5

TMEM260-216, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-216ENST00000557657 NCR2O95944 276 aa16.34■□□□□ 0.21
TMEM260-216ENST00000557657 ORM1P02763 201 aa16.34■□□□□ 0.21
TMEM260-216ENST00000557657 IL17RELQ6ZVW7 336 aa16.34■□□□□ 0.21
TMEM260-216ENST00000557657 PRSS3P2Q8NHM4 247 aa16.34■□□□□ 0.21
TMEM260-216ENST00000557657 LAMTOR2Q9Y2Q5 125 aa16.34■□□□□ 0.21
TMEM260-216ENST00000557657 CACNA1AO00555 2505 aa16.34■□□□□ 0.21
TMEM260-216ENST00000557657 POLQO75417 2590 aa16.34■□□□□ 0.21
TMEM260-216ENST00000557657 GAS8-AS1O95177 125 aa16.34■□□□□ 0.21
TMEM260-216ENST00000557657 LY6EQ16553 131 aa16.34■□□□□ 0.21
TMEM260-216ENST00000557657 PIFOQ8TCI5 191 aa16.34■□□□□ 0.21
TMEM260-216ENST00000557657 TMEM208Q9BTX3 173 aa16.34■□□□□ 0.21
TMEM260-216ENST00000557657 KLHDC1Q8N7A1 406 aa16.33■□□□□ 0.21
TMEM260-216ENST00000557657 AP5S1Q9NUS5 200 aa16.33■□□□□ 0.21
TMEM260-216ENST00000557657 TWIST1Q15672 202 aa16.33■□□□□ 0.2
TMEM260-216ENST00000557657 SAPCD1Q5SSQ6 148 aa16.33■□□□□ 0.2
TMEM260-216ENST00000557657 CRXO43186 299 aaPredicted RBP16.33■□□□□ 0.2
TMEM260-216ENST00000557657 TRBV12-3P01733 135 aa16.33■□□□□ 0.2
TMEM260-216ENST00000557657 IGHV4-38-2P0DP08 117 aa16.33■□□□□ 0.2
TMEM260-216ENST00000557657 MRPL51Q4U2R6 128 aaKnown RBP16.32■□□□□ 0.2
TMEM260-216ENST00000557657 ACACBO00763 2458 aa16.32■□□□□ 0.2
TMEM260-216ENST00000557657 SCGB2A1O75556 95 aa16.32■□□□□ 0.2
TMEM260-216ENST00000557657 GOSR1O95249 250 aa16.32■□□□□ 0.2
TMEM260-216ENST00000557657 NPSP0C0P6 89 aa16.32■□□□□ 0.2
TMEM260-216ENST00000557657 FAM104BQ5XKR9 115 aa16.32■□□□□ 0.2
TMEM260-216ENST00000557657 CYB5R2Q6BCY4 276 aa16.32■□□□□ 0.2
TMEM260-216ENST00000557657 GATD1Q8NB37 220 aa16.32■□□□□ 0.2
TMEM260-216ENST00000557657 SIGLEC8Q9NYZ4 499 aa16.32■□□□□ 0.2
TMEM260-216ENST00000557657 A0A096LNJ9 63 aa16.31■□□□□ 0.2
TMEM260-216ENST00000557657 ZNF493Q6ZR52 646 aa16.31■□□□□ 0.2
TMEM260-216ENST00000557657 FA2HQ7L5A8 372 aa16.31■□□□□ 0.2
TMEM260-216ENST00000557657 FER1L6-AS1Q8NA97 138 aa16.31■□□□□ 0.2
TMEM260-216ENST00000557657 TRAV8-2A0A0B4J237 113 aa16.31■□□□□ 0.2
TMEM260-216ENST00000557657 OR5AL1P0C617 328 aa16.31■□□□□ 0.2
TMEM260-216ENST00000557657 Q6AWC8 147 aa16.31■□□□□ 0.2
TMEM260-216ENST00000557657 LCNL1Q6ZST4 164 aa16.31■□□□□ 0.2
TMEM260-216ENST00000557657 PRELID3AQ96N28 172 aa16.31■□□□□ 0.2
TMEM260-216ENST00000557657 USP9YO00507 2555 aaPredicted RBP16.3■□□□□ 0.2
TMEM260-216ENST00000557657 MAP1LC3CQ9BXW4 147 aa16.3■□□□□ 0.2
TMEM260-216ENST00000557657 DOPEY1Q5JWR5 2465 aa16.3■□□□□ 0.2
TMEM260-216ENST00000557657 EEF1AKMT3Q96AZ1 226 aa16.3■□□□□ 0.2
TMEM260-216ENST00000557657 PSMG3-AS1Q96PY0 264 aa16.3■□□□□ 0.2
TMEM260-216ENST00000557657 C11orf21Q9P2W6 132 aa16.3■□□□□ 0.2
TMEM260-216ENST00000557657 TCTAP57738 103 aa16.29■□□□□ 0.2
TMEM260-216ENST00000557657 DEFB1P60022 68 aa16.29■□□□□ 0.2
TMEM260-216ENST00000557657 PAX8Q06710 450 aa16.29■□□□□ 0.2
TMEM260-216ENST00000557657 AGPAT4-IT1Q9H0P7 198 aa16.29■□□□□ 0.2
TMEM260-216ENST00000557657 NPYP01303 97 aa16.29■□□□□ 0.2
TMEM260-216ENST00000557657 COL5A1-AS1Q5SY13 56 aa16.29■□□□□ 0.2
TMEM260-216ENST00000557657 Q6ZS46 218 aa16.29■□□□□ 0.2
TMEM260-216ENST00000557657 COX8CQ7Z4L0 72 aa16.29■□□□□ 0.2
TMEM260-216ENST00000557657 MRPL52Q86TS9 123 aaKnown RBP16.29■□□□□ 0.2
TMEM260-216ENST00000557657 NRGNQ92686 78 aa16.29■□□□□ 0.2
TMEM260-216ENST00000557657 TRAV41A0A0B4J266 112 aa16.28■□□□□ 0.2
TMEM260-216ENST00000557657 IGLC6P0CF74 106 aa16.28■□□□□ 0.2
TMEM260-216ENST00000557657 FOXE3Q13461 319 aa16.28■□□□□ 0.2
TMEM260-216ENST00000557657 IGHV1-69DA0A0B4J2H0 117 aa16.28■□□□□ 0.2
TMEM260-216ENST00000557657 IGHV1-69P01742 117 aa16.28■□□□□ 0.2
TMEM260-216ENST00000557657 ATP5G2Q06055 141 aa16.28■□□□□ 0.2
TMEM260-216ENST00000557657 UNQ9165/PRO28630Q6UXU0 137 aa16.28■□□□□ 0.2
TMEM260-216ENST00000557657 ZNF747Q9BV97 191 aa16.28■□□□□ 0.2
TMEM260-216ENST00000557657 A0A1B0GW15 77 aa16.27■□□□□ 0.2
TMEM260-216ENST00000557657 IGHV3-11P01762 117 aa16.27■□□□□ 0.2
TMEM260-216ENST00000557657 C8orf86Q6ZUL3 223 aa16.27■□□□□ 0.2
TMEM260-216ENST00000557657 WFDC3Q8IUB2 231 aa16.27■□□□□ 0.2
TMEM260-216ENST00000557657 OR8A1Q8NGG7 326 aa16.27■□□□□ 0.2
TMEM260-216ENST00000557657 IGHV4-30-2A0A087WSY4 118 aa16.27■□□□□ 0.19
TMEM260-216ENST00000557657 TRGV3P03979 118 aa16.27■□□□□ 0.19
TMEM260-216ENST00000557657 SFTPCP11686 197 aa16.27■□□□□ 0.19
TMEM260-216ENST00000557657 ORMDL3Q8N138 153 aa16.27■□□□□ 0.19
TMEM260-216ENST00000557657 MOB4Q9Y3A3 225 aa16.27■□□□□ 0.19
TMEM260-216ENST00000557657 J3KRW8 73 aa16.26■□□□□ 0.19
TMEM260-216ENST00000557657 BMI1P35226 326 aa16.26■□□□□ 0.19
TMEM260-216ENST00000557657 PRSS57Q6UWY2 283 aa16.26■□□□□ 0.19
TMEM260-216ENST00000557657 CCL19Q99731 98 aa16.26■□□□□ 0.19
TMEM260-216ENST00000557657 DLEU1O43261 78 aa16.26■□□□□ 0.19
TMEM260-216ENST00000557657 GATA1P15976 413 aaPredicted RBP16.26■□□□□ 0.19
TMEM260-216ENST00000557657 CKS2P33552 79 aa16.26■□□□□ 0.19
TMEM260-216ENST00000557657 TMEM190Q8WZ59 177 aa16.26■□□□□ 0.19
TMEM260-216ENST00000557657 METTL26Q96S19 204 aa16.26■□□□□ 0.19
TMEM260-216ENST00000557657 HSPB8Q9UJY1 196 aa16.26■□□□□ 0.19
TMEM260-216ENST00000557657 A0A087X0K7 114 aa16.25■□□□□ 0.19
TMEM260-216ENST00000557657 FABP5P3A8MUU1 101 aa16.25■□□□□ 0.19
TMEM260-216ENST00000557657 SNAI2O43623 268 aa16.25■□□□□ 0.19
TMEM260-216ENST00000557657 IGF1P05019 195 aa16.25■□□□□ 0.19
TMEM260-216ENST00000557657 U3KQK5 164 aa16.25■□□□□ 0.19
TMEM260-216ENST00000557657 IGKV3D-20A0A0C4DH25 116 aa16.25■□□□□ 0.19
TMEM260-216ENST00000557657 FBN2P35556 2912 aa16.25■□□□□ 0.19
TMEM260-216ENST00000557657 TMEM191AQ9H0A3 160 aa16.25■□□□□ 0.19
TMEM260-216ENST00000557657 KLK15Q9H2R5 256 aa16.25■□□□□ 0.19
TMEM260-216ENST00000557657 TRBV7-1A0A0A6YYK4 115 aa16.24■□□□□ 0.19
TMEM260-216ENST00000557657 C20orf202A1L168 122 aa16.24■□□□□ 0.19
TMEM260-216ENST00000557657 SMAD7O15105 426 aaKnown RBP16.24■□□□□ 0.19
TMEM260-216ENST00000557657 BLCAPP62952 87 aa16.24■□□□□ 0.19
TMEM260-216ENST00000557657 KLK9Q2XQG4 91 aa16.24■□□□□ 0.19
TMEM260-216ENST00000557657 OR10AG1Q8NH19 301 aa16.24■□□□□ 0.19
TMEM260-216ENST00000557657 KLK9Q9UKQ9 250 aa16.24■□□□□ 0.19
TMEM260-216ENST00000557657 SPRY2O43597 315 aa16.24■□□□□ 0.19
TMEM260-216ENST00000557657 EVI2AP22794 236 aa16.24■□□□□ 0.19
TMEM260-216ENST00000557657 FAM208BQ5VWN6 2430 aa16.23■□□□□ 0.19
TMEM260-216ENST00000557657 PET117Q6UWS5 81 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms