RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 IFI27P40305 119 aaPredicted RBP11.98□□□□□ -0.49
TMEM55B-207ENST00000557041 PRRC2AP48634 2157 aaKnown RBP11.97□□□□□ -0.49
TMEM55B-207ENST00000557041 FSTL3O95633 263 aa11.97□□□□□ -0.49
TMEM55B-207ENST00000557041 PRSS1P07477 247 aa11.97□□□□□ -0.49
TMEM55B-207ENST00000557041 MSRB1Q9NZV6 116 aa11.97□□□□□ -0.49
TMEM55B-207ENST00000557041 IGHV4-38-2P0DP08 117 aa11.97□□□□□ -0.49
TMEM55B-207ENST00000557041 BMI1P35226 326 aa11.97□□□□□ -0.49
TMEM55B-207ENST00000557041 ARL3P36405 182 aa11.97□□□□□ -0.49
TMEM55B-207ENST00000557041 SAPCD1Q5SSQ6 148 aa11.97□□□□□ -0.49
TMEM55B-207ENST00000557041 C11orf71Q6IPW1 123 aa11.97□□□□□ -0.49
TMEM55B-207ENST00000557041 ATP5L2Q7Z4Y8 100 aa11.97□□□□□ -0.49
TMEM55B-207ENST00000557041 TRAV41A0A0B4J266 112 aa11.96□□□□□ -0.49
TMEM55B-207ENST00000557041 M0R381 172 aa11.96□□□□□ -0.49
TMEM55B-207ENST00000557041 MBD6Q96DN6 1003 aa11.96□□□□□ -0.49
TMEM55B-207ENST00000557041 MLST8Q9BVC4 326 aa11.96□□□□□ -0.49
TMEM55B-207ENST00000557041 KLF12Q9Y4X4 402 aa11.96□□□□□ -0.49
TMEM55B-207ENST00000557041 CENPVL3A0A0U1RRI6 287 aa11.96□□□□□ -0.49
TMEM55B-207ENST00000557041 IL17RELQ6ZVW7 336 aa11.96□□□□□ -0.49
TMEM55B-207ENST00000557041 NPBQ8NG41 125 aa11.96□□□□□ -0.49
TMEM55B-207ENST00000557041 CBY3A6NI87 242 aa11.96□□□□□ -0.5
TMEM55B-207ENST00000557041 MYCNOSP40205 109 aa11.96□□□□□ -0.5
TMEM55B-207ENST00000557041 BLCAPP62952 87 aa11.96□□□□□ -0.5
TMEM55B-207ENST00000557041 HIST1H1AQ02539 215 aaPredicted RBP11.96□□□□□ -0.5
TMEM55B-207ENST00000557041 TMEM95Q3KNT9 176 aa11.96□□□□□ -0.5
TMEM55B-207ENST00000557041 NDUFA3O95167 84 aa11.95□□□□□ -0.5
TMEM55B-207ENST00000557041 TGFAP01135 160 aa11.95□□□□□ -0.5
TMEM55B-207ENST00000557041 IGLC2P0DOY2 106 aa11.95□□□□□ -0.5
TMEM55B-207ENST00000557041 PLP1P60201 277 aa11.95□□□□□ -0.5
TMEM55B-207ENST00000557041 VAMP3Q15836 100 aa11.95□□□□□ -0.5
TMEM55B-207ENST00000557041 TMEM14CQ9P0S9 112 aa11.95□□□□□ -0.5
TMEM55B-207ENST00000557041 IGHV1-24A0A0C4DH33 117 aa11.95□□□□□ -0.5
TMEM55B-207ENST00000557041 PRR25Q96S07 402 aa11.95□□□□□ -0.5
TMEM55B-207ENST00000557041 HSPB8Q9UJY1 196 aa11.95□□□□□ -0.5
TMEM55B-207ENST00000557041 JMJD1CQ15652 2540 aa11.95□□□□□ -0.5
TMEM55B-207ENST00000557041 EGR2P11161 476 aaPredicted RBP11.95□□□□□ -0.5
TMEM55B-207ENST00000557041 LMO4P61968 165 aa11.95□□□□□ -0.5
TMEM55B-207ENST00000557041 PAX8Q06710 450 aa11.95□□□□□ -0.5
TMEM55B-207ENST00000557041 DTX2Q86UW9 622 aa11.95□□□□□ -0.5
TMEM55B-207ENST00000557041 TTC9CQ8N5M4 171 aa11.95□□□□□ -0.5
TMEM55B-207ENST00000557041 ODF3BA8MYP8 253 aa11.94□□□□□ -0.5
TMEM55B-207ENST00000557041 NMUP48645 174 aa11.94□□□□□ -0.5
TMEM55B-207ENST00000557041 FABP5P3A8MUU1 101 aa11.94□□□□□ -0.5
TMEM55B-207ENST00000557041 TEX43Q6ZNM6 134 aa11.94□□□□□ -0.5
TMEM55B-207ENST00000557041 SIRPDQ9H106 197 aa11.94□□□□□ -0.5
TMEM55B-207ENST00000557041 LAMTOR2Q9Y2Q5 125 aa11.94□□□□□ -0.5
TMEM55B-207ENST00000557041 IGHV4-30-2A0A087WSY4 118 aa11.94□□□□□ -0.5
TMEM55B-207ENST00000557041 MGPP08493 103 aa11.94□□□□□ -0.5
TMEM55B-207ENST00000557041 IGLL1P15814 213 aa11.94□□□□□ -0.5
TMEM55B-207ENST00000557041 CRIP1P50238 77 aa11.94□□□□□ -0.5
TMEM55B-207ENST00000557041 COL5A1-AS1Q5SY13 56 aa11.94□□□□□ -0.5
TMEM55B-207ENST00000557041 OR10AG1Q8NH19 301 aa11.94□□□□□ -0.5
TMEM55B-207ENST00000557041 C19orf71A6NCJ1 209 aa11.93□□□□□ -0.5
TMEM55B-207ENST00000557041 NUTF2P61970 127 aaKnown RBP11.93□□□□□ -0.5
TMEM55B-207ENST00000557041 ORMDL3Q8N138 153 aa11.93□□□□□ -0.5
TMEM55B-207ENST00000557041 FASNP49327 2511 aaKnown RBP11.93□□□□□ -0.5
TMEM55B-207ENST00000557041 TCF21O43680 179 aa11.93□□□□□ -0.5
TMEM55B-207ENST00000557041 SRSF8Q9BRL6 282 aaKnown RBP11.93□□□□□ -0.5
TMEM55B-207ENST00000557041 ZNF492Q9P255 531 aa11.93□□□□□ -0.5
TMEM55B-207ENST00000557041 TRAV9-2A0A087WT02 112 aa11.92□□□□□ -0.5
TMEM55B-207ENST00000557041 TRBV12-3P01733 135 aa11.92□□□□□ -0.5
TMEM55B-207ENST00000557041 FAM106AQ4KMX7 169 aa11.92□□□□□ -0.5
TMEM55B-207ENST00000557041 RASL11AQ6T310 242 aa11.92□□□□□ -0.5
TMEM55B-207ENST00000557041 OOSP1A8MZH6 123 aa11.92□□□□□ -0.5
TMEM55B-207ENST00000557041 NUDT3O95989 172 aa11.92□□□□□ -0.5
TMEM55B-207ENST00000557041 ZNF80P51504 273 aaPredicted RBP11.92□□□□□ -0.5
TMEM55B-207ENST00000557041 C2orf88Q9BSF0 95 aa11.92□□□□□ -0.5
TMEM55B-207ENST00000557041 F6UB75 175 aa11.92□□□□□ -0.5
TMEM55B-207ENST00000557041 SYS1-DBNDD2H3BUS1 97 aa11.92□□□□□ -0.5
TMEM55B-207ENST00000557041 IGLV2-11P01706 119 aa11.92□□□□□ -0.5
TMEM55B-207ENST00000557041 GATA1P15976 413 aaPredicted RBP11.92□□□□□ -0.5
TMEM55B-207ENST00000557041 DNLZQ5SXM8 178 aa11.92□□□□□ -0.5
TMEM55B-207ENST00000557041 MOB4Q9Y3A3 225 aa11.92□□□□□ -0.5
TMEM55B-207ENST00000557041 FN1P02751 2386 aaKnown RBP11.92□□□□□ -0.5
TMEM55B-207ENST00000557041 H3BVH4 76 aa11.91□□□□□ -0.5
TMEM55B-207ENST00000557041 PRSS57Q6UWY2 283 aa11.91□□□□□ -0.5
TMEM55B-207ENST00000557041 FAM110DQ8TAY7 271 aaPredicted RBP11.91□□□□□ -0.5
TMEM55B-207ENST00000557041 KIR2DL5BA0A0G2JN68 375 aa11.91□□□□□ -0.5
TMEM55B-207ENST00000557041 KIR2DL5BA0A0G2JPC4 375 aa11.91□□□□□ -0.5
TMEM55B-207ENST00000557041 F5H697 171 aa11.91□□□□□ -0.5
TMEM55B-207ENST00000557041 TM4SF20Q53R12 229 aa11.91□□□□□ -0.5
TMEM55B-207ENST00000557041 KIR2DL5AQ8N109 375 aa11.91□□□□□ -0.5
TMEM55B-207ENST00000557041 WI2-2373I1.2A0A1W2PRP0 233 aa11.91□□□□□ -0.5
TMEM55B-207ENST00000557041 IGLC3P0DOY3 106 aa11.91□□□□□ -0.5
TMEM55B-207ENST00000557041 LYPD1Q8N2G4 141 aa11.91□□□□□ -0.5
TMEM55B-207ENST00000557041 PRSS22Q9GZN4 317 aa11.91□□□□□ -0.5
TMEM55B-207ENST00000557041 FCER1GP30273 86 aa11.9□□□□□ -0.5
TMEM55B-207ENST00000557041 CACNG7P62955 275 aa11.9□□□□□ -0.5
TMEM55B-207ENST00000557041 C20orf144Q9BQM9 153 aa11.9□□□□□ -0.5
TMEM55B-207ENST00000557041 TRAV26-2A0A0B4J265 109 aa11.9□□□□□ -0.5
TMEM55B-207ENST00000557041 IGHV1-69DA0A0B4J2H0 117 aa11.9□□□□□ -0.5
TMEM55B-207ENST00000557041 M0QZK8 103 aa11.9□□□□□ -0.5
TMEM55B-207ENST00000557041 OVOL3O00110 214 aa11.9□□□□□ -0.5
TMEM55B-207ENST00000557041 IGHV1-69P01742 117 aa11.9□□□□□ -0.5
TMEM55B-207ENST00000557041 LBHQ53QV2 105 aaPredicted RBP11.9□□□□□ -0.5
TMEM55B-207ENST00000557041 AP1S3Q96PC3 154 aa11.9□□□□□ -0.5
TMEM55B-207ENST00000557041 CELSR2Q9HCU4 2923 aa11.9□□□□□ -0.51
TMEM55B-207ENST00000557041 PTTG1IPP53801 180 aa11.9□□□□□ -0.51
TMEM55B-207ENST00000557041 RNASE4P34096 147 aaKnown RBP11.89□□□□□ -0.51
TMEM55B-207ENST00000557041 LOXL1Q08397 574 aaPredicted RBP11.89□□□□□ -0.51
TMEM55B-207ENST00000557041 SLC25A34Q6PIV7 304 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms