RNA–Protein interactions for RNA: ENST00000556869.1

LINC00871-203, long intergenic non-protein coding RNA 871, humanhuman

TSL 2

Gene LINC00871, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-203ENST00000556869 CAV3P56539 151 aa0.14□□□□□ -2.39
LINC00871-203ENST00000556869 MRPS36P82909 103 aaKnown RBP0.14□□□□□ -2.39
LINC00871-203ENST00000556869 SPINK6Q6UWN8 80 aa0.14□□□□□ -2.39
LINC00871-203ENST00000556869 LINC00269Q8N2A0 174 aa0.14□□□□□ -2.39
LINC00871-203ENST00000556869 STX19Q8N4C7 294 aa0.14□□□□□ -2.39
LINC00871-203ENST00000556869 LAMTOR3Q9UHA4 124 aa0.14□□□□□ -2.39
LINC00871-203ENST00000556869 UFC1Q9Y3C8 167 aa0.14□□□□□ -2.39
LINC00871-203ENST00000556869 ASH1LQ9NR48 2969 aaKnown RBP0.14□□□□□ -2.39
LINC00871-203ENST00000556869 ADGBQ8N7X0 1667 aa0.14□□□□□ -2.39
LINC00871-203ENST00000556869 KIAA1107Q9UPP5 1409 aa0.13□□□□□ -2.39
LINC00871-203ENST00000556869 FAT4Q6V0I7 4981 aa0.13□□□□□ -2.39
LINC00871-203ENST00000556869 TRACP01848 142 aa0.13□□□□□ -2.39
LINC00871-203ENST00000556869 NDUFA6P56556 154 aa0.13□□□□□ -2.39
LINC00871-203ENST00000556869 SNRPD3P62318 126 aaKnown RBP0.13□□□□□ -2.39
LINC00871-203ENST00000556869 LYG2Q86SG7 212 aa0.13□□□□□ -2.39
LINC00871-203ENST00000556869 ANGPTL5Q86XS5 388 aa0.13□□□□□ -2.39
LINC00871-203ENST00000556869 PRR15Q8IV56 129 aa0.13□□□□□ -2.39
LINC00871-203ENST00000556869 HOPXQ9BPY8 73 aaPredicted RBP0.13□□□□□ -2.39
LINC00871-203ENST00000556869 LPAR5Q9H1C0 372 aa0.13□□□□□ -2.39
LINC00871-203ENST00000556869 BIN3Q9NQY0 253 aa0.13□□□□□ -2.39
LINC00871-203ENST00000556869 OTORQ9NRC9 128 aa0.13□□□□□ -2.39
LINC00871-203ENST00000556869 GID8Q9NWU2 228 aa0.13□□□□□ -2.39
LINC00871-203ENST00000556869 EIF3AQ14152 1382 aaKnown RBP0.13□□□□□ -2.39
LINC00871-203ENST00000556869 SYNE2Q8WXH0 6885 aaKnown RBP0.13□□□□□ -2.39
LINC00871-203ENST00000556869 TECPR2O15040 1411 aa0.13□□□□□ -2.39
LINC00871-203ENST00000556869 LOC107984156A0A0G2JMH3 177 aa0.12□□□□□ -2.39
LINC00871-203ENST00000556869 TRDV1A0A1B0GX56 115 aa0.12□□□□□ -2.39
LINC00871-203ENST00000556869 BBIP1A8MTZ0 92 aa0.12□□□□□ -2.39
LINC00871-203ENST00000556869 GABARAPH6UMI1 98 aa0.12□□□□□ -2.39
LINC00871-203ENST00000556869 LY6G6CO95867 125 aa0.12□□□□□ -2.39
LINC00871-203ENST00000556869 IGHV3-30P01768 117 aa0.12□□□□□ -2.39
LINC00871-203ENST00000556869 IGHV3-30-5P0DP03 117 aa0.12□□□□□ -2.39
LINC00871-203ENST00000556869 TPT1P13693 172 aaKnown RBP0.12□□□□□ -2.39
LINC00871-203ENST00000556869 SERPINB1P30740 379 aa0.12□□□□□ -2.39
LINC00871-203ENST00000556869 SDC2P34741 201 aa0.12□□□□□ -2.39
LINC00871-203ENST00000556869 XAF1Q6GPH4 301 aa0.12□□□□□ -2.39
LINC00871-203ENST00000556869 C3orf62Q6ZUJ4 267 aa0.12□□□□□ -2.39
LINC00871-203ENST00000556869 ARL17AQ8IVW1 177 aa0.12□□□□□ -2.39
LINC00871-203ENST00000556869 OR5H6Q8NGV6 325 aa0.12□□□□□ -2.39
LINC00871-203ENST00000556869 CDC26Q8NHZ8 85 aa0.12□□□□□ -2.39
LINC00871-203ENST00000556869 CLEC2BQ92478 149 aa0.12□□□□□ -2.39
LINC00871-203ENST00000556869 CARD19Q96LW7 228 aa0.12□□□□□ -2.39
LINC00871-203ENST00000556869 CIB3Q96Q77 187 aaPredicted RBP0.12□□□□□ -2.39
LINC00871-203ENST00000556869 TAF9BQ9HBM6 251 aa0.12□□□□□ -2.39
LINC00871-203ENST00000556869 NUBP2Q9Y5Y2 271 aa0.12□□□□□ -2.39
LINC00871-203ENST00000556869 MYH3P11055 1940 aa0.12□□□□□ -2.39
LINC00871-203ENST00000556869 YTHDC2Q9H6S0 1430 aaKnown RBP0.12□□□□□ -2.39
LINC00871-203ENST00000556869 TRAPPC8Q9Y2L5 1435 aa0.12□□□□□ -2.39
LINC00871-203ENST00000556869 ANKRD31Q8N7Z5 1873 aa0.12□□□□□ -2.39
LINC00871-203ENST00000556869 DSPPQ9NZW4 1301 aa0.12□□□□□ -2.39
LINC00871-203ENST00000556869 ARL5CA6NH57 179 aa0.11□□□□□ -2.39
LINC00871-203ENST00000556869 CD3DP04234 171 aa0.11□□□□□ -2.39
LINC00871-203ENST00000556869 GYPBP06028 91 aa0.11□□□□□ -2.39
LINC00871-203ENST00000556869 MAXP61244 160 aa0.11□□□□□ -2.39
LINC00871-203ENST00000556869 SPINK13Q1W4C9 94 aa0.11□□□□□ -2.39
LINC00871-203ENST00000556869 C3orf33Q6P1S2 294 aa0.11□□□□□ -2.39
LINC00871-203ENST00000556869 DCUN1D2Q6PH85 259 aa0.11□□□□□ -2.39
LINC00871-203ENST00000556869 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.11□□□□□ -2.39
LINC00871-203ENST00000556869 CCL4L1Q8NHW4 92 aa0.11□□□□□ -2.39
LINC00871-203ENST00000556869 DIRC1Q969H9 104 aa0.11□□□□□ -2.39
LINC00871-203ENST00000556869 ISOC1Q96CN7 298 aa0.11□□□□□ -2.39
LINC00871-203ENST00000556869 PRELID3AQ96N28 172 aa0.11□□□□□ -2.39
LINC00871-203ENST00000556869 LRTM1Q9HBL6 345 aa0.11□□□□□ -2.39
LINC00871-203ENST00000556869 IL20Q9NYY1 176 aa0.11□□□□□ -2.39
LINC00871-203ENST00000556869 SYNMO15061 1565 aa0.11□□□□□ -2.39
LINC00871-203ENST00000556869 KIAA1549LQ6ZVL6 1849 aa0.1□□□□□ -2.39
LINC00871-203ENST00000556869 FSIP2Q5CZC0 6907 aa0.1□□□□□ -2.39
LINC00871-203ENST00000556869 ANK1P16157 1881 aa0.1□□□□□ -2.39
LINC00871-203ENST00000556869 NUP210Q8TEM1 1887 aaPredicted RBP0.1□□□□□ -2.39
LINC00871-203ENST00000556869 DLC1Q96QB1 1528 aa0.1□□□□□ -2.39
LINC00871-203ENST00000556869 A0A1W2PPB8 328 aa0.1□□□□□ -2.39
LINC00871-203ENST00000556869 A0A1W2PRS3 328 aa0.1□□□□□ -2.39
LINC00871-203ENST00000556869 MAP1LC3B2A6NCE7 125 aa0.1□□□□□ -2.39
LINC00871-203ENST00000556869 A6NN06 94 aa0.1□□□□□ -2.39
LINC00871-203ENST00000556869 KIR3DP1A8MWS1 328 aa0.1□□□□□ -2.39
LINC00871-203ENST00000556869 PPP5D1E7EU14 171 aa0.1□□□□□ -2.39
LINC00871-203ENST00000556869 FXYD1O00168 92 aa0.1□□□□□ -2.39
LINC00871-203ENST00000556869 PFDN1O60925 122 aa0.1□□□□□ -2.39
LINC00871-203ENST00000556869 EVI2AP22794 236 aa0.1□□□□□ -2.39
LINC00871-203ENST00000556869 S100A11P31949 105 aa0.1□□□□□ -2.39
LINC00871-203ENST00000556869 GLYATL3Q5SZD4 288 aa0.1□□□□□ -2.39
LINC00871-203ENST00000556869 TRIQKQ629K1 86 aa0.1□□□□□ -2.39
LINC00871-203ENST00000556869 CSAG1Q6PB30 78 aa0.1□□□□□ -2.39
LINC00871-203ENST00000556869 C10orf99Q6UWK7 81 aa0.1□□□□□ -2.39
LINC00871-203ENST00000556869 IZUMO2Q6UXV1 221 aa0.1□□□□□ -2.39
LINC00871-203ENST00000556869 TEX29Q8N6K0 151 aa0.1□□□□□ -2.39
LINC00871-203ENST00000556869 TCTEX1D1Q8N7M0 179 aa0.1□□□□□ -2.39
LINC00871-203ENST00000556869 LAMTOR2Q9Y2Q5 125 aa0.1□□□□□ -2.39
LINC00871-203ENST00000556869 USP54Q70EL1 1684 aa0.1□□□□□ -2.39
LINC00871-203ENST00000556869 CTTNBP2Q8WZ74 1663 aa0.1□□□□□ -2.39
LINC00871-203ENST00000556869 FGD6Q6ZV73 1430 aa0.1□□□□□ -2.39
LINC00871-203ENST00000556869 LOC107986453A0A1B0GWG9 222 aa0.09□□□□□ -2.4
LINC00871-203ENST00000556869 TMEM238C9JI98 176 aa0.09□□□□□ -2.4
LINC00871-203ENST00000556869 H7BYZ3 331 aa0.09□□□□□ -2.4
LINC00871-203ENST00000556869 EDF1O60869 148 aaKnown RBP0.09□□□□□ -2.4
LINC00871-203ENST00000556869 SAA1P0DJI8 122 aaPredicted RBP0.09□□□□□ -2.4
LINC00871-203ENST00000556869 BCL2P10415 239 aa0.09□□□□□ -2.4
LINC00871-203ENST00000556869 G0S2P27469 103 aa0.09□□□□□ -2.4
LINC00871-203ENST00000556869 CRYBA4P53673 196 aa0.09□□□□□ -2.4
LINC00871-203ENST00000556869 DNAJB13P59910 316 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms