RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 WT1-ASQ06250 92 aa3.87□□□□□ -1.79
SRP54-211ENST00000556445 FXYD3Q14802 87 aa3.87□□□□□ -1.79
SRP54-211ENST00000556445 TMEM241Q24JQ0 296 aa3.87□□□□□ -1.79
SRP54-211ENST00000556445 FAM78BQ5VT40 261 aa3.87□□□□□ -1.79
SRP54-211ENST00000556445 HCP5Q6MZN7 132 aa3.87□□□□□ -1.79
SRP54-211ENST00000556445 SPNS3Q6ZMD2 512 aa3.87□□□□□ -1.79
SRP54-211ENST00000556445 Q6ZVH6 145 aa3.87□□□□□ -1.79
SRP54-211ENST00000556445 GATD1Q8NB37 220 aa3.87□□□□□ -1.79
SRP54-211ENST00000556445 OR51G1Q8NGK1 321 aa3.87□□□□□ -1.79
SRP54-211ENST00000556445 C10orf105Q8TEF2 133 aa3.87□□□□□ -1.79
SRP54-211ENST00000556445 ACY3Q96HD9 319 aa3.87□□□□□ -1.79
SRP54-211ENST00000556445 SMIM7Q9BQ49 75 aa3.87□□□□□ -1.79
SRP54-211ENST00000556445 TCEAL7Q9BRU2 100 aa3.87□□□□□ -1.79
SRP54-211ENST00000556445 MS4A6AQ9H2W1 248 aa3.87□□□□□ -1.79
SRP54-211ENST00000556445 LY96Q9Y6Y9 160 aa3.87□□□□□ -1.79
SRP54-211ENST00000556445 CACNA1BQ00975 2339 aa3.87□□□□□ -1.79
SRP54-211ENST00000556445 MGAQ8IWI9 3026 aa3.87□□□□□ -1.79
SRP54-211ENST00000556445 TGIF2-C20orf24A0A0A6YYL0 155 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 IGHV3-38A0A0C4DH36 116 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 A0A1W2PRE2 83 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 C1orf196B1AJZ1 125 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 B4DSR2 109 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 NPFFO15130 113 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 HLA-DRB1P01911 266 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 LINC00869P0C866 280 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 ARL14EPLP0DKL9 152 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 CD99P14209 185 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 S100PP25815 95 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 RND2P52198 227 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 TCL1AP56279 114 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 RAB5BP61020 215 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 GNB1P62873 340 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 FLI1Q01543 452 aaPredicted RBP3.86□□□□□ -1.79
SRP54-211ENST00000556445 PAX8Q06710 450 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 KLRD1Q13241 179 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 MRGPRG-AS1Q2M3A8 158 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 C10orf55Q5SWW7 151 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 C10orf113Q5VZT2 155 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 UFSP1Q6NVU6 142 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 Q6ZN92 141 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 Q8N6K4 173 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 OR4X1Q8NH49 305 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 PGLYRP4Q96LB8 373 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 PARLQ9H300 379 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 TNFRSF19Q9NS68 423 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 DOK5Q9P104 306 aa3.86□□□□□ -1.79
SRP54-211ENST00000556445 PKD1L2Q7Z442 2459 aa3.85□□□□□ -1.79
SRP54-211ENST00000556445 IGHV1-69DA0A0B4J2H0 117 aa3.85□□□□□ -1.79
SRP54-211ENST00000556445 E7EUB6 86 aa3.85□□□□□ -1.79
SRP54-211ENST00000556445 K7EQG2 157 aa3.85□□□□□ -1.79
SRP54-211ENST00000556445 M0QZK8 103 aa3.85□□□□□ -1.79
SRP54-211ENST00000556445 OR7C2O60412 319 aa3.85□□□□□ -1.79
SRP54-211ENST00000556445 HYPMO75409 117 aa3.85□□□□□ -1.79
SRP54-211ENST00000556445 IGHV1-69P01742 117 aa3.85□□□□□ -1.79
SRP54-211ENST00000556445 PRSS1P07477 247 aa3.85□□□□□ -1.79
SRP54-211ENST00000556445 CNTFRP26992 372 aa3.85□□□□□ -1.79
SRP54-211ENST00000556445 PFN2P35080 140 aa3.85□□□□□ -1.79
SRP54-211ENST00000556445 YPEL3P61236 119 aaPredicted RBP3.85□□□□□ -1.79
SRP54-211ENST00000556445 NUTF2P61970 127 aaKnown RBP3.85□□□□□ -1.79
SRP54-211ENST00000556445 RPL32P62910 135 aaKnown RBP3.85□□□□□ -1.79
SRP54-211ENST00000556445 TTC9CQ8N5M4 171 aa3.85□□□□□ -1.79
SRP54-211ENST00000556445 WNK2Q9Y3S1 2297 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 CFAP54Q96N23 3096 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 FREM2Q5SZK8 3169 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 ACACBO00763 2458 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 CHD8Q9HCK8 2581 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 IGKV1OR2-108A0A075B7D4 117 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 MDFIC2A0A1B0GVS7 189 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 RBMY1BA6NDE4 496 aaKnown RBP3.84□□□□□ -1.79
SRP54-211ENST00000556445 RBMY1EA6NEQ0 496 aaKnown RBP3.84□□□□□ -1.79
SRP54-211ENST00000556445 COLCA2A8K830 154 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 C9JCJ5 164 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 H7BYZ3 331 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 H7C1H1 209 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 I3L2K1 104 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 GNG7O60262 68 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 REG1AP05451 166 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 MSMBP08118 114 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 RBMY1DP0C7P1 496 aaKnown RBP3.84□□□□□ -1.79
SRP54-211ENST00000556445 RBMY1A1P0DJD3 496 aaKnown RBP3.84□□□□□ -1.79
SRP54-211ENST00000556445 UBE2L3P68036 154 aaKnown RBP3.84□□□□□ -1.79
SRP54-211ENST00000556445 ADIRFQ15847 76 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 KLK9Q2XQG4 91 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 KIAA1644Q3SXP7 199 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 LDLRAD2Q5SZI1 272 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 FAM231DQ6ZW35 169 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 MIR17HGQ75NE6 70 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 TEX29Q8N6K0 151 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 SGMS2Q8NHU3 365 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 VN1R17PQ8TDU5 208 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 Q8WTZ3 238 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 CHCHD10Q8WYQ3 142 aaPredicted RBP3.84□□□□□ -1.79
SRP54-211ENST00000556445 HIST1H2BAQ96A08 127 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 DUX3Q96PT4 197 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 IMMP2LQ96T52 175 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 KIR2DL4Q99706 377 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 PAXXQ9BUH6 204 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 BIN3Q9NQY0 253 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 ZNF355PQ9NSJ1 428 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 VPREB3Q9UKI3 123 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms