RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 DOCK7Q96N67 2140 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 IGKV1D-37A0A075B6S9 117 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 TRAV30A0A087WSZ9 112 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 IGHV3-72A0A0B4J1Y9 119 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 IGHV1-24A0A0C4DH33 117 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 TRBV6-1A0A0K0K1D8 114 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 A0A1B0GUT8 65 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 IGLC7A0M8Q6 106 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 B9A039 149 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 H0Y8G0 127 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 TCF21O43680 179 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 GNG7O60262 68 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 IGHV3-48P01763 117 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 HLA-DRB1P01911 266 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 TSPOP30536 169 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 GPR6P46095 362 aaPredicted RBP3.46□□□□□ -1.86
ATXN3-241ENST00000556374 HINT1P49773 126 aaPredicted RBP3.46□□□□□ -1.86
ATXN3-241ENST00000556374 FOXA3P55318 350 aaPredicted RBP3.46□□□□□ -1.86
ATXN3-241ENST00000556374 RPS20P60866 119 aaKnown RBP3.46□□□□□ -1.86
ATXN3-241ENST00000556374 PAX2Q02962 417 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 VAMP3Q15836 100 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 LEMD1Q68G75 181 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 SLC25A34Q6PIV7 304 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 C12orf54Q6X4T0 127 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 GOLT1AQ6ZVE7 132 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 PPP1R27Q86WC6 154 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 LYPD1Q8N2G4 141 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 RPRMLQ8N4K4 120 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 OR4C5Q8NGB2 326 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 OR10AG1Q8NH19 301 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 SRSF12Q8WXF0 261 aaKnown RBP3.46□□□□□ -1.86
ATXN3-241ENST00000556374 RNASE6Q93091 150 aaKnown RBP3.46□□□□□ -1.86
ATXN3-241ENST00000556374 ST6GALNAC6Q969X2 333 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 LINC00479Q96M42 142 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 AP1S3Q96PC3 154 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 RNF5Q99942 180 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 TPPP3Q9BW30 176 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 TM2D2Q9BX73 214 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 SLC25A39Q9BZJ4 359 aaPredicted RBP3.46□□□□□ -1.86
ATXN3-241ENST00000556374 MS4A6AQ9H2W1 248 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 CLEC5AQ9NY25 188 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 C1RLQ9NZP8 487 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 THYN1Q9P016 225 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 ONECUT1Q9UBC0 465 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 CTSZQ9UBR2 303 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 SIGLEC9Q9Y336 463 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 KLF12Q9Y4X4 402 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 TIMM8BQ9Y5J9 83 aaPredicted RBP3.46□□□□□ -1.86
ATXN3-241ENST00000556374 HCFC1P51610 2035 aa3.46□□□□□ -1.86
ATXN3-241ENST00000556374 FREM1Q5H8C1 2179 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 TET2Q6N021 2002 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-241ENST00000556374 LOC102724200A0A096LPH7 203 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-241ENST00000556374 IGHV3-21A0A0B4J1V1 117 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 PPIAL4CA0A0B4J2A2 164 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 IGHV1-3A0A0C4DH29 117 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 C19orf71A6NCJ1 209 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 H3BRN7 92 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 BUB1B-PAK6H3BSN5 160 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 SYS1-DBNDD2H3BUS1 97 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 C19orf84I3L1E1 186 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 IGLV2-23P01705 113 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 IL4P05112 153 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 CRYGCP07315 174 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 APELAP0DMC3 54 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 PPIAL4GP0DN37 164 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 MYCNOSP40205 109 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 TFPI2P48307 235 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 PSG9Q00887 426 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 HIST1H1AQ02539 215 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-241ENST00000556374 RELQ04864 619 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-241ENST00000556374 UTF1Q5T230 341 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 CCDC144NLQ6NUI1 221 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 LYPD2Q6UXB3 125 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 PATE2Q6UY27 113 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 Q8N976 141 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 RNF125Q96EQ8 232 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 SGK494Q96LW2 274 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 SMR3AQ99954 134 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 FBXL15Q9H469 300 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 DCAF16Q9NXF7 216 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 CNTRLQ7Z7A1 2325 aa3.45□□□□□ -1.86
ATXN3-241ENST00000556374 HIVEP2P31629 2446 aa3.44□□□□□ -1.86
ATXN3-241ENST00000556374 MAP1AP78559 2803 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-241ENST00000556374 ARID1AO14497 2285 aa3.44□□□□□ -1.86
ATXN3-241ENST00000556374 INTS1Q8N201 2190 aaKnown RBP3.44□□□□□ -1.86
ATXN3-241ENST00000556374 TRBV19A0A075B6N1 114 aa3.44□□□□□ -1.86
ATXN3-241ENST00000556374 TMEM189A5PLL7 270 aa3.44□□□□□ -1.86
ATXN3-241ENST00000556374 A6NDN8 102 aa3.44□□□□□ -1.86
ATXN3-241ENST00000556374 TEX22C9J3V5 150 aa3.44□□□□□ -1.86
ATXN3-241ENST00000556374 H3BTX0 84 aa3.44□□□□□ -1.86
ATXN3-241ENST00000556374 NBR2O15453 112 aa3.44□□□□□ -1.86
ATXN3-241ENST00000556374 APOHP02749 345 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-241ENST00000556374 CSN3P07498 182 aa3.44□□□□□ -1.86
ATXN3-241ENST00000556374 FRMD6-AS1P0C7T7 363 aa3.44□□□□□ -1.86
ATXN3-241ENST00000556374 IGLC1P0CG04 106 aa3.44□□□□□ -1.86
ATXN3-241ENST00000556374 RPL7P18124 248 aaKnown RBP3.44□□□□□ -1.86
ATXN3-241ENST00000556374 BMI1P35226 326 aa3.44□□□□□ -1.86
ATXN3-241ENST00000556374 MFAP4P55083 255 aa3.44□□□□□ -1.86
ATXN3-241ENST00000556374 DLX6P56179 175 aa3.44□□□□□ -1.86
ATXN3-241ENST00000556374 ARF6P62330 175 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms